RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ZBTB22O15209 634 aa26.8■■□□□ 1.88
NPAS3-206ENST00000548645 PPFIA3O75145 1194 aa26.8■■□□□ 1.88
NPAS3-206ENST00000548645 FANCCQ00597 558 aa26.8■■□□□ 1.88
NPAS3-206ENST00000548645 IKBKBO14920 756 aa26.79■■□□□ 1.88
NPAS3-206ENST00000548645 MYD88Q99836 296 aa26.79■■□□□ 1.88
NPAS3-206ENST00000548645 BIN1O00499 593 aa26.79■■□□□ 1.88
NPAS3-206ENST00000548645 SPTLC2O15270 562 aa26.79■■□□□ 1.88
NPAS3-206ENST00000548645 METTL22Q9BUU2 404 aaPredicted RBP26.79■■□□□ 1.88
NPAS3-206ENST00000548645 CLIC4Q9Y696 253 aa26.79■■□□□ 1.88
NPAS3-206ENST00000548645 NEDD4P46934 1319 aa26.79■■□□□ 1.88
NPAS3-206ENST00000548645 PXDNQ92626 1479 aa26.79■■□□□ 1.88
NPAS3-206ENST00000548645 ZNF202O95125 648 aa26.78■■□□□ 1.88
NPAS3-206ENST00000548645 FDPSP14324 419 aaKnown RBP26.78■■□□□ 1.88
NPAS3-206ENST00000548645 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.78■■□□□ 1.88
NPAS3-206ENST00000548645 NFAT5O94916 1531 aa26.78■■□□□ 1.88
NPAS3-206ENST00000548645 ATP8B1O43520 1251 aa26.78■■□□□ 1.88
NPAS3-206ENST00000548645 PALLDQ8WX93 1383 aa26.77■■□□□ 1.88
NPAS3-206ENST00000548645 LMOD1P29536 600 aaPredicted RBP26.77■■□□□ 1.88
NPAS3-206ENST00000548645 KCNH5Q8NCM2 988 aa26.77■■□□□ 1.88
NPAS3-206ENST00000548645 EFCAB8A8MWE9 144 aa26.76■■□□□ 1.88
NPAS3-206ENST00000548645 CBFA2T2O43439 604 aa26.76■■□□□ 1.88
NPAS3-206ENST00000548645 TRIM65Q6PJ69 517 aa26.76■■□□□ 1.88
NPAS3-206ENST00000548645 TICAM2Q86XR7 235 aa26.76■■□□□ 1.88
NPAS3-206ENST00000548645 BRAPQ7Z569 592 aa26.76■■□□□ 1.87
NPAS3-206ENST00000548645 C8orf76Q96K31 380 aa26.76■■□□□ 1.87
NPAS3-206ENST00000548645 TULP2O00295 520 aa26.76■■□□□ 1.87
NPAS3-206ENST00000548645 TADA3O75528 432 aa26.76■■□□□ 1.87
NPAS3-206ENST00000548645 URI1O94763 535 aaPredicted RBP26.76■■□□□ 1.87
NPAS3-206ENST00000548645 LRRFIP1Q32MZ4 808 aaKnown RBP26.76■■□□□ 1.87
NPAS3-206ENST00000548645 XAGE3Q8WTP9 111 aa26.76■■□□□ 1.87
NPAS3-206ENST00000548645 POLR3DP05423 398 aaPredicted RBP26.75■■□□□ 1.87
NPAS3-206ENST00000548645 PSME1Q06323 249 aa26.75■■□□□ 1.87
NPAS3-206ENST00000548645 PHF8Q9UPP1 1060 aa26.75■■□□□ 1.87
NPAS3-206ENST00000548645 MYL6BP14649 208 aa26.75■■□□□ 1.87
NPAS3-206ENST00000548645 SYNE3Q6ZMZ3 975 aa26.75■■□□□ 1.87
NPAS3-206ENST00000548645 RGPD2P0DJD1 1756 aa26.75■■□□□ 1.87
NPAS3-206ENST00000548645 RABL6Q3YEC7 729 aaPredicted RBP26.74■■□□□ 1.87
NPAS3-206ENST00000548645 CCDC158Q5M9N0 1113 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 MYSM1Q5VVJ2 828 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 FCHSD1Q86WN1 690 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 FBXL16Q8N461 479 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 ZSCAN12O43309 604 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 HSPD1P10809 573 aaKnown RBP26.74■■□□□ 1.87
NPAS3-206ENST00000548645 CMA1P23946 247 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 HNRNPH2P55795 449 aaKnown RBP26.74■■□□□ 1.87
NPAS3-206ENST00000548645 COPS6Q7L5N1 327 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 PAG1Q9NWQ8 432 aa26.74■■□□□ 1.87
NPAS3-206ENST00000548645 UBASH3AP57075 661 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 EVCP57679 992 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 ZMYM1Q5SVZ6 1142 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 CHST3Q7LGC8 479 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 GOLIM4O00461 696 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 OTUD7BQ6GQQ9 843 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 CARD6Q9BX69 1037 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 TMX1Q9H3N1 280 aa26.73■■□□□ 1.87
NPAS3-206ENST00000548645 DHX16O60231 1041 aaKnown RBP26.72■■□□□ 1.87
NPAS3-206ENST00000548645 SLC20A2Q08357 652 aa26.72■■□□□ 1.87
NPAS3-206ENST00000548645 FBXO18Q8NFZ0 1043 aa26.72■■□□□ 1.87
NPAS3-206ENST00000548645 ATP1A3P13637 1013 aa26.72■■□□□ 1.87
NPAS3-206ENST00000548645 PFKFB1P16118 471 aa26.72■■□□□ 1.87
NPAS3-206ENST00000548645 SERPINC1P01008 464 aa26.72■■□□□ 1.87
NPAS3-206ENST00000548645 REXO1L1PQ8IX06 675 aa26.72■■□□□ 1.87
NPAS3-206ENST00000548645 UTP14AQ9BVJ6 771 aaKnown RBP26.71■■□□□ 1.87
NPAS3-206ENST00000548645 PARP3Q9Y6F1 533 aa26.71■■□□□ 1.87
NPAS3-206ENST00000548645 ARHGAP23Q9P227 1491 aa26.71■■□□□ 1.87
NPAS3-206ENST00000548645 ANO1Q5XXA6 986 aa26.71■■□□□ 1.87
NPAS3-206ENST00000548645 ANKRD13DQ6ZTN6 518 aa26.71■■□□□ 1.87
NPAS3-206ENST00000548645 TXLNBQ8N3L3 684 aa26.71■■□□□ 1.87
NPAS3-206ENST00000548645 TSPYL1Q9H0U9 437 aa26.71■■□□□ 1.87
NPAS3-206ENST00000548645 POLR3GO15318 223 aaPredicted RBP26.7■■□□□ 1.87
NPAS3-206ENST00000548645 AXDND1Q5T1B0 1012 aaPredicted RBP26.7■■□□□ 1.87
NPAS3-206ENST00000548645 UBE3BQ7Z3V4 1068 aa26.7■■□□□ 1.87
NPAS3-206ENST00000548645 MPHOSPH8Q99549 860 aa26.7■■□□□ 1.87
NPAS3-206ENST00000548645 HSD3B7Q9H2F3 369 aa26.7■■□□□ 1.87
NPAS3-206ENST00000548645 A0A0G2JLW4 131 aa26.7■■□□□ 1.86
NPAS3-206ENST00000548645 MYL5Q02045 173 aa26.7■■□□□ 1.86
NPAS3-206ENST00000548645 CFAP100Q494V2 611 aa26.7■■□□□ 1.86
NPAS3-206ENST00000548645 CCDC9Q9Y3X0 531 aaKnown RBP26.7■■□□□ 1.86
NPAS3-206ENST00000548645 KCNA6P17658 529 aa26.69■■□□□ 1.86
NPAS3-206ENST00000548645 TUBE1Q9UJT0 475 aa26.69■■□□□ 1.86
NPAS3-206ENST00000548645 MYO1BO43795 1136 aa26.69■■□□□ 1.86
NPAS3-206ENST00000548645 ZNF790Q6PG37 636 aa26.69■■□□□ 1.86
NPAS3-206ENST00000548645 VSTM4Q8IW00 320 aa26.69■■□□□ 1.86
NPAS3-206ENST00000548645 UBXN6Q9BZV1 441 aa26.69■■□□□ 1.86
NPAS3-206ENST00000548645 TOP1P11387 765 aaKnown RBP26.68■■□□□ 1.86
NPAS3-206ENST00000548645 SIPA1L3O60292 1781 aaPredicted RBP26.68■■□□□ 1.86
NPAS3-206ENST00000548645 ARHGAP6O43182 974 aa26.68■■□□□ 1.86
NPAS3-206ENST00000548645 ISM2Q6H9L7 571 aa26.68■■□□□ 1.86
NPAS3-206ENST00000548645 NEUROD6Q96NK8 337 aa26.68■■□□□ 1.86
NPAS3-206ENST00000548645 GOLGA6L9A6NEM1 432 aa26.67■■□□□ 1.86
NPAS3-206ENST00000548645 SEC31AO94979 1220 aaKnown RBP26.67■■□□□ 1.86
NPAS3-206ENST00000548645 GPR161Q8N6U8 529 aaKnown RBP26.67■■□□□ 1.86
NPAS3-206ENST00000548645 DPF2Q92785 391 aa26.67■■□□□ 1.86
NPAS3-206ENST00000548645 MAST3O60307 1309 aa26.67■■□□□ 1.86
NPAS3-206ENST00000548645 FANCGO15287 622 aa26.67■■□□□ 1.86
NPAS3-206ENST00000548645 SYKP43405 635 aa26.67■■□□□ 1.86
NPAS3-206ENST00000548645 GPS2Q13227 327 aa26.67■■□□□ 1.86
NPAS3-206ENST00000548645 PHRF1Q9P1Y6 1649 aaKnown RBP26.67■■□□□ 1.86
NPAS3-206ENST00000548645 RNF113AO15541 343 aaKnown RBP26.66■■□□□ 1.86
NPAS3-206ENST00000548645 CAPN2P17655 700 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms