RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 PLPP7Q8NBV4 271 aa7.09□□□□□ -1.27
NPIPB12-203ENST00000548346 ADAMTS19Q8TE59 1207 aa7.09□□□□□ -1.27
NPIPB12-203ENST00000548346 GTPBP3Q969Y2 492 aaKnown RBP7.09□□□□□ -1.27
NPIPB12-203ENST00000548346 CCNL1Q9UK58 526 aaPredicted RBP7.09□□□□□ -1.27
NPIPB12-203ENST00000548346 RGPD5Q99666 1765 aa7.09□□□□□ -1.27
NPIPB12-203ENST00000548346 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
NPIPB12-203ENST00000548346 PLEKHG2Q9H7P9 1386 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 NEFLP07196 543 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 USP4Q13107 963 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 WASHC4Q2M389 1173 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 C4orf17Q53FE4 359 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 C16orf71Q8IYS4 520 aaPredicted RBP7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 ZNF295-AS1Q8N0V1 137 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 ALG2Q9H553 416 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 PXDNLA1KZ92 1463 aa7.08□□□□□ -1.28
NPIPB12-203ENST00000548346 ZBED9Q6R2W3 1325 aa7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 TTC21BQ7Z4L5 1316 aa7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 USP54Q70EL1 1684 aa7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 HMGB2P26583 209 aaKnown RBP7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 SRPK2P78362 688 aaKnown RBP7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 SVOPQ8N4V2 548 aa7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 ZSCAN10Q96SZ4 725 aaPredicted RBP7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 GPAMQ9HCL2 828 aa7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 NLRP2Q9NX02 1062 aa7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 CABP1Q9NZU7 370 aa7.07□□□□□ -1.28
NPIPB12-203ENST00000548346 TTC21AQ8NDW8 1320 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 POM121CA8CG34 1229 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 TMEM229AB2RXF0 380 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 F11P03951 625 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 SMC1BQ8NDV3 1235 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 GMCL1Q96IK5 515 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 PRDM10Q9NQV6 1147 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 USP3Q9Y6I4 520 aa7.06□□□□□ -1.28
NPIPB12-203ENST00000548346 DOT1LQ8TEK3 1739 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 KIAA1551Q9HCM1 1747 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 INHAP05111 366 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 CELA2BP08218 269 aaPredicted RBP7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 GDF10P55107 478 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 SEMA3FQ13275 785 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 DDX54Q8TDD1 881 aaKnown RBP7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 DCAF11Q8TEB1 546 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 SYTL4Q96C24 671 aaPredicted RBP7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 MRS2Q9HD23 443 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 MBIPQ9NS73 344 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 PCDHGA11Q9Y5H2 935 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 C5P01031 1676 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 KCPQ6ZWJ8 1503 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 USP31Q70CQ4 1352 aa7.05□□□□□ -1.28
NPIPB12-203ENST00000548346 TOGARAM1Q9Y4F4 1720 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 KDM2BQ8NHM5 1336 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 SMG6Q86US8 1419 aaKnown RBP7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 NSD3Q9BZ95 1437 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 SOX11P35716 441 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 TGFB2P61812 414 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 IRX6P78412 446 aaPredicted RBP7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 TLR1Q15399 786 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 MAP7D1Q3KQU3 841 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 C9orf131Q5VYM1 1079 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 ERICH6BQ5W0A0 696 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 AMIGO3Q86WK7 504 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 NUCKS1Q9H1E3 243 aaKnown RBP7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 RUBCNLQ9H714 662 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 HCN2Q9UL51 889 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 RBM19Q9Y4C8 960 aaKnown RBP7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 ROCK2O75116 1388 aaKnown RBP7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 KIF13BQ9NQT8 1826 aa7.04□□□□□ -1.28
NPIPB12-203ENST00000548346 CENPJQ9HC77 1338 aaPredicted RBP7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 TNRC6CQ9HCJ0 1690 aaKnown RBP7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 A0A1B0GTH6 734 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 SSFA2P28290 1259 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 MSX1P28360 303 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 TMEM214Q6NUQ4 689 aaKnown RBP7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 FAM9BQ8IZU0 186 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 RHBDD1Q8TEB9 315 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 ACDQ96AP0 544 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 IQSEC3Q9UPP2 1182 aaPredicted RBP7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 KAT6BQ8WYB5 2073 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 KIAA1210Q9ULL0 1709 aa7.03□□□□□ -1.28
NPIPB12-203ENST00000548346 RNF123Q5XPI4 1314 aa7.02□□□□□ -1.28
NPIPB12-203ENST00000548346 C4BP0C0L5 1744 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 PKD1L3Q7Z443 1732 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 H7C1W4 665 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 ATP4AP20648 1035 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 RGS19P49795 217 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 ARHGAP27Q6ZUM4 889 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 UCN2Q96RP3 112 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 RRAGCQ9HB90 399 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 DNAAF2Q9NVR5 837 aaKnown RBP7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 PALLDQ8WX93 1383 aa7.02□□□□□ -1.29
NPIPB12-203ENST00000548346 TAF1LQ8IZX4 1826 aa7.01□□□□□ -1.29
NPIPB12-203ENST00000548346 UBR3Q6ZT12 1888 aa7.01□□□□□ -1.29
NPIPB12-203ENST00000548346 FAM208AQ9UK61 1670 aaKnown RBP7.01□□□□□ -1.29
NPIPB12-203ENST00000548346 FOXN1O15353 648 aa7.01□□□□□ -1.29
NPIPB12-203ENST00000548346 GNASQ5JWF2 1037 aa7.01□□□□□ -1.29
NPIPB12-203ENST00000548346 PNISRQ8TF01 805 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms