RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
SVOP-202ENST00000548229 ZNF646O15015 1829 aaPredicted RBP20.31■□□□□ 0.84
SVOP-202ENST00000548229 MYH3P11055 1940 aa20.3■□□□□ 0.84
SVOP-202ENST00000548229 PI4KAP2A4QPH2 592 aa20.3■□□□□ 0.84
SVOP-202ENST00000548229 PI4KAP1Q8N8J0 262 aa20.3■□□□□ 0.84
SVOP-202ENST00000548229 FKBP1AP62942 108 aaKnown RBP20.29■□□□□ 0.84
SVOP-202ENST00000548229 ZNF333Q96JL9 665 aa20.29■□□□□ 0.84
SVOP-202ENST00000548229 LAMB1P07942 1786 aa20.29■□□□□ 0.84
SVOP-202ENST00000548229 SPDYE2BA6NHP3 402 aa20.28■□□□□ 0.84
SVOP-202ENST00000548229 H7C1W4 665 aa20.28■□□□□ 0.84
SVOP-202ENST00000548229 WDHD1O75717 1129 aaPredicted RBP20.28■□□□□ 0.84
SVOP-202ENST00000548229 SPDYE6P0CI01 402 aa20.28■□□□□ 0.84
SVOP-202ENST00000548229 ITGA6P23229 1130 aa20.28■□□□□ 0.84
SVOP-202ENST00000548229 SLC9C1Q4G0N8 1177 aa20.28■□□□□ 0.84
SVOP-202ENST00000548229 C8orf58Q8NAV2 365 aa20.28■□□□□ 0.84
SVOP-202ENST00000548229 PLA2G12BQ9BX93 195 aa20.28■□□□□ 0.84
SVOP-202ENST00000548229 NEURL1BA8MQ27 555 aa20.27■□□□□ 0.84
SVOP-202ENST00000548229 USP2O75604 605 aaPredicted RBP20.27■□□□□ 0.84
SVOP-202ENST00000548229 TNFAIP1Q13829 316 aa20.27■□□□□ 0.84
SVOP-202ENST00000548229 SLC4A8Q2Y0W8 1093 aa20.27■□□□□ 0.84
SVOP-202ENST00000548229 CFAP100Q494V2 611 aa20.27■□□□□ 0.84
SVOP-202ENST00000548229 NBPF12Q5TAG4 269 aaPredicted RBP20.27■□□□□ 0.84
SVOP-202ENST00000548229 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
SVOP-202ENST00000548229 UBE3BQ7Z3V4 1068 aa20.27■□□□□ 0.84
SVOP-202ENST00000548229 STK31Q9BXU1 1019 aa20.27■□□□□ 0.84
SVOP-202ENST00000548229 VEZTQ9HBM0 779 aa20.27■□□□□ 0.84
SVOP-202ENST00000548229 SSC5DA1L4H1 1573 aa20.26■□□□□ 0.83
SVOP-202ENST00000548229 SZT2Q5T011 3432 aa20.26■□□□□ 0.83
SVOP-202ENST00000548229 KLRK1P26718 216 aa20.26■□□□□ 0.83
SVOP-202ENST00000548229 CHRNDQ07001 517 aa20.26■□□□□ 0.83
SVOP-202ENST00000548229 ZNF804AQ7Z570 1209 aa20.26■□□□□ 0.83
SVOP-202ENST00000548229 PTPN18Q99952 460 aa20.26■□□□□ 0.83
SVOP-202ENST00000548229 ZFYVE28Q9HCC9 887 aa20.26■□□□□ 0.83
SVOP-202ENST00000548229 COLQQ9Y215 455 aaPredicted RBP20.26■□□□□ 0.83
SVOP-202ENST00000548229 SPEF2Q9C093 1822 aa20.25■□□□□ 0.83
SVOP-202ENST00000548229 CLRN2A0PK11 232 aa20.25■□□□□ 0.83
SVOP-202ENST00000548229 RASA3Q14644 834 aa20.25■□□□□ 0.83
SVOP-202ENST00000548229 CWF19L2Q2TBE0 894 aaKnown RBP20.25■□□□□ 0.83
SVOP-202ENST00000548229 CERS5Q8N5B7 392 aa20.25■□□□□ 0.83
SVOP-202ENST00000548229 PRMT6Q96LA8 375 aaPredicted RBP20.25■□□□□ 0.83
SVOP-202ENST00000548229 CSF1RP07333 972 aa20.24■□□□□ 0.83
SVOP-202ENST00000548229 IL1R1P14778 569 aa20.24■□□□□ 0.83
SVOP-202ENST00000548229 GJA5P36382 358 aa20.24■□□□□ 0.83
SVOP-202ENST00000548229 GTF2A2P52657 109 aa20.24■□□□□ 0.83
SVOP-202ENST00000548229 RBM5P52756 815 aaKnown RBP eCLIP20.24■□□□□ 0.83
SVOP-202ENST00000548229 OPTNQ96CV9 577 aa20.24■□□□□ 0.83
SVOP-202ENST00000548229 MYH16Q9H6N6 1097 aa20.24■□□□□ 0.83
SVOP-202ENST00000548229 TRIOBPQ9H2D6 2365 aa20.24■□□□□ 0.83
SVOP-202ENST00000548229 RANBP2P49792 3224 aaKnown RBP20.23■□□□□ 0.83
SVOP-202ENST00000548229 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
SVOP-202ENST00000548229 ANKRD18BA2A2Z9 1011 aa20.23■□□□□ 0.83
SVOP-202ENST00000548229 F8W031 263 aaPredicted RBP20.23■□□□□ 0.83
SVOP-202ENST00000548229 TAF1CQ15572 869 aaPredicted RBP20.23■□□□□ 0.83
SVOP-202ENST00000548229 MS4A4AQ96JQ5 239 aa20.23■□□□□ 0.83
SVOP-202ENST00000548229 APAF1O14727 1248 aa20.22■□□□□ 0.83
SVOP-202ENST00000548229 GCKRQ14397 625 aa20.22■□□□□ 0.83
SVOP-202ENST00000548229 KIF22Q14807 665 aa20.22■□□□□ 0.83
SVOP-202ENST00000548229 ELP3Q9H9T3 547 aa20.22■□□□□ 0.83
SVOP-202ENST00000548229 PTCH2Q9Y6C5 1203 aa20.22■□□□□ 0.83
SVOP-202ENST00000548229 GNRH1P01148 92 aa20.21■□□□□ 0.83
SVOP-202ENST00000548229 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
SVOP-202ENST00000548229 CSADQ9Y600 493 aa20.2■□□□□ 0.82
SVOP-202ENST00000548229 CCL15-CCL14A0A0B4J2E2 113 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 TNNI2P48788 182 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 PRMT2P55345 433 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 MAP3K9P80192 1104 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 IFIT5Q13325 482 aaKnown RBP20.19■□□□□ 0.82
SVOP-202ENST00000548229 CCL15Q16663 113 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 SPDYE2Q495Y8 402 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 BRI3BPQ8WY22 251 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 OTUD5Q96G74 571 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 ZCCHC17Q9NP64 241 aaKnown RBP20.19■□□□□ 0.82
SVOP-202ENST00000548229 SERPINA10Q9UK55 444 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 IRS2Q9Y4H2 1338 aa20.19■□□□□ 0.82
SVOP-202ENST00000548229 H0YGN5 161 aa20.18■□□□□ 0.82
SVOP-202ENST00000548229 TAF5LO75529 589 aa20.18■□□□□ 0.82
SVOP-202ENST00000548229 CAP1Q01518 475 aa20.18■□□□□ 0.82
SVOP-202ENST00000548229 TSPYL6Q8N831 410 aa20.18■□□□□ 0.82
SVOP-202ENST00000548229 ZNF70Q9UC06 446 aaPredicted RBP20.18■□□□□ 0.82
SVOP-202ENST00000548229 A0A0C4DFX4 3053 aa20.18■□□□□ 0.82
SVOP-202ENST00000548229 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
SVOP-202ENST00000548229 CASP7P55210 303 aa20.17■□□□□ 0.82
SVOP-202ENST00000548229 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
SVOP-202ENST00000548229 LINS1Q8NG48 757 aa20.17■□□□□ 0.82
SVOP-202ENST00000548229 TLR2O60603 784 aa20.16■□□□□ 0.82
SVOP-202ENST00000548229 CETPP11597 493 aa20.16■□□□□ 0.82
SVOP-202ENST00000548229 HELBQ8NG08 1087 aaPredicted RBP20.16■□□□□ 0.82
SVOP-202ENST00000548229 FAM205AQ6ZU69 1335 aa20.16■□□□□ 0.82
SVOP-202ENST00000548229 SNAP23O00161 211 aa20.15■□□□□ 0.82
SVOP-202ENST00000548229 VGLL4Q14135 290 aa20.15■□□□□ 0.82
SVOP-202ENST00000548229 NKX2-3Q8TAU0 364 aa20.15■□□□□ 0.82
SVOP-202ENST00000548229 DNAAF4Q8WXU2 420 aa20.15■□□□□ 0.82
SVOP-202ENST00000548229 TTF2Q9UNY4 1162 aaKnown RBP20.15■□□□□ 0.82
SVOP-202ENST00000548229 LACTBP83111 547 aaPredicted RBP20.14■□□□□ 0.81
SVOP-202ENST00000548229 MFSD14BQ5SR56 506 aa20.14■□□□□ 0.81
SVOP-202ENST00000548229 FAM43AQ8N2R8 423 aa20.14■□□□□ 0.81
SVOP-202ENST00000548229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.14■□□□□ 0.81
SVOP-202ENST00000548229 HOOK2Q96ED9 719 aa20.14■□□□□ 0.81
SVOP-202ENST00000548229 TEPSINQ96N21 525 aa20.14■□□□□ 0.81
SVOP-202ENST00000548229 TDRD3Q9H7E2 651 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms