RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 IL1R1P14778 569 aa20.92■□□□□ 0.94
KRT4-201ENST00000548097 GNL3LQ9NVN8 582 aaKnown RBP20.92■□□□□ 0.94
KRT4-201ENST00000548097 UQCRFS1P1P0C7P4 283 aa20.91■□□□□ 0.94
KRT4-201ENST00000548097 TTC22Q5TAA0 569 aa20.91■□□□□ 0.94
KRT4-201ENST00000548097 TBC1D9Q6ZT07 1266 aa20.91■□□□□ 0.94
KRT4-201ENST00000548097 SPATA5Q8NB90 893 aa20.91■□□□□ 0.94
KRT4-201ENST00000548097 MYH13Q9UKX3 1938 aa20.91■□□□□ 0.94
KRT4-201ENST00000548097 SCN9AQ15858 1988 aa20.9■□□□□ 0.94
KRT4-201ENST00000548097 ERC2O15083 957 aa20.9■□□□□ 0.94
KRT4-201ENST00000548097 GLRX3O76003 335 aaKnown RBP20.9■□□□□ 0.94
KRT4-201ENST00000548097 GTF2IP78347 998 aa20.9■□□□□ 0.94
KRT4-201ENST00000548097 MXD3Q9BW11 206 aa20.9■□□□□ 0.94
KRT4-201ENST00000548097 GOLIM4O00461 696 aa20.9■□□□□ 0.94
KRT4-201ENST00000548097 NIM1KQ8IY84 436 aa20.9■□□□□ 0.94
KRT4-201ENST00000548097 ZNF512BQ96KM6 892 aaPredicted RBP20.9■□□□□ 0.94
KRT4-201ENST00000548097 HAUS7Q99871 368 aa20.9■□□□□ 0.94
KRT4-201ENST00000548097 SBF1O95248 1867 aa20.89■□□□□ 0.94
KRT4-201ENST00000548097 CYP2E1P05181 493 aaPredicted RBP20.89■□□□□ 0.93
KRT4-201ENST00000548097 TRIM6-TRIM34B2RNG4 842 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 RAD17O75943 681 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 LMNB1P20700 586 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 JDP2Q8WYK2 163 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 RILPL2Q969X0 211 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 AOX1Q06278 1338 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 PODNQ7Z5L7 613 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 RNF181Q9P0P0 153 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 DENND2AQ9ULE3 1009 aa20.88■□□□□ 0.93
KRT4-201ENST00000548097 GRIN3BO60391 1043 aa20.87■□□□□ 0.93
KRT4-201ENST00000548097 CHGBP05060 677 aa20.87■□□□□ 0.93
KRT4-201ENST00000548097 GRIK5Q16478 980 aa20.87■□□□□ 0.93
KRT4-201ENST00000548097 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.87■□□□□ 0.93
KRT4-201ENST00000548097 VPS33BQ9H267 617 aa20.87■□□□□ 0.93
KRT4-201ENST00000548097 PIH1D3Q9NQM4 214 aaKnown RBP20.87■□□□□ 0.93
KRT4-201ENST00000548097 PAG1Q9NWQ8 432 aa20.87■□□□□ 0.93
KRT4-201ENST00000548097 ABCF2Q9UG63 623 aa20.87■□□□□ 0.93
KRT4-201ENST00000548097 MYO5AQ9Y4I1 1855 aaKnown RBP20.87■□□□□ 0.93
KRT4-201ENST00000548097 TTLL5Q6EMB2 1281 aa20.86■□□□□ 0.93
KRT4-201ENST00000548097 ZNRF3Q9ULT6 936 aa20.86■□□□□ 0.93
KRT4-201ENST00000548097 SDSP20132 328 aa20.85■□□□□ 0.93
KRT4-201ENST00000548097 C9orf131Q5VYM1 1079 aa20.85■□□□□ 0.93
KRT4-201ENST00000548097 SEMA3EO15041 775 aa20.85■□□□□ 0.93
KRT4-201ENST00000548097 SLFNL1Q499Z3 407 aa20.85■□□□□ 0.93
KRT4-201ENST00000548097 CERS5Q8N5B7 392 aa20.84■□□□□ 0.93
KRT4-201ENST00000548097 PSMD14O00487 310 aa20.83■□□□□ 0.93
KRT4-201ENST00000548097 PRDX5P30044 214 aa20.83■□□□□ 0.93
KRT4-201ENST00000548097 CXCL9Q07325 125 aa20.83■□□□□ 0.93
KRT4-201ENST00000548097 MFSD14BQ5SR56 506 aa20.83■□□□□ 0.93
KRT4-201ENST00000548097 ZBTB12Q9Y330 459 aaPredicted RBP20.83■□□□□ 0.93
KRT4-201ENST00000548097 ZNF541Q9H0D2 1346 aa20.83■□□□□ 0.92
KRT4-201ENST00000548097 ZNF646O15015 1829 aaPredicted RBP20.83■□□□□ 0.92
KRT4-201ENST00000548097 USP17L3A6NCW0 530 aa20.83■□□□□ 0.92
KRT4-201ENST00000548097 USP17L4A6NCW7 530 aa20.83■□□□□ 0.92
KRT4-201ENST00000548097 F8W031 263 aaPredicted RBP20.83■□□□□ 0.92
KRT4-201ENST00000548097 USP17L1Q7RTZ2 530 aa20.83■□□□□ 0.92
KRT4-201ENST00000548097 DICER1Q9UPY3 1922 aaKnown RBP20.82■□□□□ 0.92
KRT4-201ENST00000548097 FAM205AQ6ZU69 1335 aa20.82■□□□□ 0.92
KRT4-201ENST00000548097 IDH1O75874 414 aaKnown RBP20.82■□□□□ 0.92
KRT4-201ENST00000548097 DACT2Q5SW24 774 aa20.82■□□□□ 0.92
KRT4-201ENST00000548097 FZD9O00144 591 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 BMP2KLQ5H9B9 411 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 STRIP1Q5VSL9 837 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 CNTROBQ8N137 903 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 FSD1Q9BTV5 496 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 LRP2BPQ9P2M1 347 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 TIAM2Q8IVF5 1701 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 WDR66Q8TBY9 1149 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 EVI5LQ96CN4 794 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 GJA3Q9Y6H8 435 aa20.81■□□□□ 0.92
KRT4-201ENST00000548097 RAI14Q9P0K7 980 aa20.8■□□□□ 0.92
KRT4-201ENST00000548097 AK9Q5TCS8 1911 aa20.8■□□□□ 0.92
KRT4-201ENST00000548097 PDS5AQ29RF7 1337 aaKnown RBP20.79■□□□□ 0.92
KRT4-201ENST00000548097 EIF6P56537 245 aaKnown RBP20.79■□□□□ 0.92
KRT4-201ENST00000548097 CIAPIN1Q6FI81 312 aa20.79■□□□□ 0.92
KRT4-201ENST00000548097 KIAA0825Q8IV33 1275 aa20.79■□□□□ 0.92
KRT4-201ENST00000548097 KBTBD3Q8NAB2 608 aa20.79■□□□□ 0.92
KRT4-201ENST00000548097 TTF1Q15361 905 aaPredicted RBP20.78■□□□□ 0.92
KRT4-201ENST00000548097 ZNF384Q8TF68 577 aa20.78■□□□□ 0.92
KRT4-201ENST00000548097 PSME4Q14997 1843 aa20.78■□□□□ 0.92
KRT4-201ENST00000548097 VIL1P09327 827 aaKnown RBP20.78■□□□□ 0.92
KRT4-201ENST00000548097 ERICH6Q7L0X2 663 aa20.78■□□□□ 0.92
KRT4-201ENST00000548097 SALL1Q9NSC2 1324 aa20.77■□□□□ 0.92
KRT4-201ENST00000548097 DOCK2Q92608 1830 aa20.77■□□□□ 0.92
KRT4-201ENST00000548097 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
KRT4-201ENST00000548097 LDHBP07195 334 aaKnown RBP20.77■□□□□ 0.92
KRT4-201ENST00000548097 SCNN1DP51172 638 aa20.77■□□□□ 0.92
KRT4-201ENST00000548097 MECOMQ03112 1051 aa20.77■□□□□ 0.92
KRT4-201ENST00000548097 RSBN1LQ6PCB5 846 aaPredicted RBP20.77■□□□□ 0.92
KRT4-201ENST00000548097 TBC1D22AQ8WUA7 517 aa20.77■□□□□ 0.92
KRT4-201ENST00000548097 SHTN1A0MZ66 631 aa20.76■□□□□ 0.91
KRT4-201ENST00000548097 ZBTB22O15209 634 aa20.76■□□□□ 0.91
KRT4-201ENST00000548097 DIXDC1Q155Q3 683 aa20.76■□□□□ 0.91
KRT4-201ENST00000548097 SLC9C2Q5TAH2 1124 aa20.76■□□□□ 0.91
KRT4-201ENST00000548097 MAGEB6Q8N7X4 407 aa20.76■□□□□ 0.91
KRT4-201ENST00000548097 DDNO94850 711 aaPredicted RBP20.76■□□□□ 0.91
KRT4-201ENST00000548097 TTF2Q9UNY4 1162 aaKnown RBP20.76■□□□□ 0.91
KRT4-201ENST00000548097 TNIP1Q15025 636 aa20.75■□□□□ 0.91
KRT4-201ENST00000548097 ADGRA1Q86SQ6 560 aa20.75■□□□□ 0.91
KRT4-201ENST00000548097 ZGPATQ8N5A5 531 aaKnown RBP20.75■□□□□ 0.91
KRT4-201ENST00000548097 NSUN4Q96CB9 384 aaKnown RBP20.75■□□□□ 0.91
KRT4-201ENST00000548097 ADAMTSL1Q8N6G6 1762 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms