RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 OGFOD1Q8N543 542 aa23.23■■□□□ 1.31
PRPF40B-206ENST00000547764 IQSEC3Q9UPP2 1182 aaPredicted RBP23.23■■□□□ 1.31
PRPF40B-206ENST00000547764 FAM205AQ6ZU69 1335 aa23.23■■□□□ 1.31
PRPF40B-206ENST00000547764 FKBP1AP62942 108 aaKnown RBP23.22■■□□□ 1.31
PRPF40B-206ENST00000547764 TFCP2Q12800 502 aa23.22■■□□□ 1.31
PRPF40B-206ENST00000547764 G3BP1Q13283 466 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRPF40B-206ENST00000547764 CEP85Q6P2H3 762 aa23.22■■□□□ 1.31
PRPF40B-206ENST00000547764 CEP350Q5VT06 3117 aa23.22■■□□□ 1.31
PRPF40B-206ENST00000547764 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
PRPF40B-206ENST00000547764 TRAF5O00463 557 aa23.2■■□□□ 1.3
PRPF40B-206ENST00000547764 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
PRPF40B-206ENST00000547764 MMP14P50281 582 aa23.2■■□□□ 1.3
PRPF40B-206ENST00000547764 FMR1Q06787 632 aaKnown RBP eCLIP23.2■■□□□ 1.3
PRPF40B-206ENST00000547764 SCARF1Q14162 830 aa23.2■■□□□ 1.3
PRPF40B-206ENST00000547764 GLIS2Q9BZE0 524 aaPredicted RBP23.2■■□□□ 1.3
PRPF40B-206ENST00000547764 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
PRPF40B-206ENST00000547764 ASTN2O75129 1339 aaPredicted RBP23.19■■□□□ 1.3
PRPF40B-206ENST00000547764 TIMM10P62072 90 aa23.19■■□□□ 1.3
PRPF40B-206ENST00000547764 MFSD14BQ5SR56 506 aa23.19■■□□□ 1.3
PRPF40B-206ENST00000547764 CDC37L1Q7L3B6 337 aa23.19■■□□□ 1.3
PRPF40B-206ENST00000547764 HDAC9Q9UKV0 1011 aa23.19■■□□□ 1.3
PRPF40B-206ENST00000547764 F8W031 263 aaPredicted RBP23.18■■□□□ 1.3
PRPF40B-206ENST00000547764 SURF6O75683 361 aaKnown RBP23.18■■□□□ 1.3
PRPF40B-206ENST00000547764 CHAF1AQ13111 956 aaPredicted RBP23.18■■□□□ 1.3
PRPF40B-206ENST00000547764 DCPSQ96C86 337 aaKnown RBP23.18■■□□□ 1.3
PRPF40B-206ENST00000547764 CHMP4BQ9H444 224 aaKnown RBP23.18■■□□□ 1.3
PRPF40B-206ENST00000547764 AKAP2Q9Y2D5 859 aa23.18■■□□□ 1.3
PRPF40B-206ENST00000547764 ADORA1P30542 326 aa23.17■■□□□ 1.3
PRPF40B-206ENST00000547764 NBPF9Q3BBW0 867 aa23.17■■□□□ 1.3
PRPF40B-206ENST00000547764 USP48Q86UV5 1035 aa23.17■■□□□ 1.3
PRPF40B-206ENST00000547764 DNAJC5GQ8N7S2 189 aa23.17■■□□□ 1.3
PRPF40B-206ENST00000547764 CREBZFQ9NS37 354 aa23.17■■□□□ 1.3
PRPF40B-206ENST00000547764 GGA3Q9NZ52 723 aa23.17■■□□□ 1.3
PRPF40B-206ENST00000547764 NOP58Q9Y2X3 529 aaKnown RBP23.17■■□□□ 1.3
PRPF40B-206ENST00000547764 A0A1B0GUL7 405 aa23.16■■□□□ 1.3
PRPF40B-206ENST00000547764 TMEM88BA6NKF7 163 aa23.16■■□□□ 1.3
PRPF40B-206ENST00000547764 POLR2AP24928 1970 aaKnown RBP23.16■■□□□ 1.3
PRPF40B-206ENST00000547764 WNT10BO00744 389 aa23.15■■□□□ 1.3
PRPF40B-206ENST00000547764 PHKA1P46020 1223 aa23.15■■□□□ 1.3
PRPF40B-206ENST00000547764 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
PRPF40B-206ENST00000547764 ANGEL2Q5VTE6 544 aaKnown RBP23.15■■□□□ 1.3
PRPF40B-206ENST00000547764 KRT26Q7Z3Y9 468 aa23.15■■□□□ 1.3
PRPF40B-206ENST00000547764 RRP1P56182 461 aaKnown RBP23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 CCDC102BQ68D86 513 aa23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 DLK2Q6UY11 383 aa23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 RPAP2Q8IXW5 612 aaPredicted RBP23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 TBC1D22AQ8WUA7 517 aa23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 XAGE2Q96GT9 111 aa23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 ZBED3Q96IU2 234 aaPredicted RBP23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 NEUROD6Q96NK8 337 aa23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 GNL3LQ9NVN8 582 aaKnown RBP23.14■■□□□ 1.29
PRPF40B-206ENST00000547764 ADM5C9JUS6 153 aa23.13■■□□□ 1.29
PRPF40B-206ENST00000547764 GRIK5Q16478 980 aa23.13■■□□□ 1.29
PRPF40B-206ENST00000547764 CST9Q5W186 159 aa23.13■■□□□ 1.29
PRPF40B-206ENST00000547764 TTF2Q9UNY4 1162 aaKnown RBP23.13■■□□□ 1.29
PRPF40B-206ENST00000547764 DLGAP5Q15398 846 aa23.12■■□□□ 1.29
PRPF40B-206ENST00000547764 CFAP100Q494V2 611 aa23.12■■□□□ 1.29
PRPF40B-206ENST00000547764 SULF1Q8IWU6 871 aa23.12■■□□□ 1.29
PRPF40B-206ENST00000547764 SIRT2Q8IXJ6 389 aa23.12■■□□□ 1.29
PRPF40B-206ENST00000547764 MTMR14Q8NCE2 650 aa23.12■■□□□ 1.29
PRPF40B-206ENST00000547764 ARAP2Q8WZ64 1704 aa23.12■■□□□ 1.29
PRPF40B-206ENST00000547764 PCDHAC2Q9Y5I4 1007 aa23.12■■□□□ 1.29
PRPF40B-206ENST00000547764 COL1A1P02452 1464 aaPredicted RBP23.11■■□□□ 1.29
PRPF40B-206ENST00000547764 PITPNM2Q9BZ72 1349 aa23.11■■□□□ 1.29
PRPF40B-206ENST00000547764 CELF2O95319 508 aaKnown RBP23.11■■□□□ 1.29
PRPF40B-206ENST00000547764 WDR66Q8TBY9 1149 aa23.11■■□□□ 1.29
PRPF40B-206ENST00000547764 GPR108Q9NPR9 543 aa23.11■■□□□ 1.29
PRPF40B-206ENST00000547764 SEMA3EO15041 775 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 TNNI3KQ59H18 835 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 KLRG1Q96E93 195 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 ZNF408Q9H9D4 720 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 DENND2AQ9ULE3 1009 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 SCAF8Q9UPN6 1271 aaKnown RBP23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 EXOC6BQ9Y2D4 811 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 FPGT-TNNI3KV9GXZ4 949 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 TRPM7Q96QT4 1865 aa23.1■■□□□ 1.29
PRPF40B-206ENST00000547764 ZBTB22O15209 634 aa23.09■■□□□ 1.29
PRPF40B-206ENST00000547764 HMMRO75330 724 aa23.09■■□□□ 1.29
PRPF40B-206ENST00000547764 RBM5P52756 815 aaKnown RBP eCLIP23.09■■□□□ 1.29
PRPF40B-206ENST00000547764 PRMT6Q96LA8 375 aaPredicted RBP23.09■■□□□ 1.29
PRPF40B-206ENST00000547764 SERPINA10Q9UK55 444 aa23.09■■□□□ 1.29
PRPF40B-206ENST00000547764 MYH13Q9UKX3 1938 aa23.08■■□□□ 1.29
PRPF40B-206ENST00000547764 SPDYE2BA6NHP3 402 aa23.08■■□□□ 1.29
PRPF40B-206ENST00000547764 SPDYE6P0CI01 402 aa23.08■■□□□ 1.29
PRPF40B-206ENST00000547764 GORABQ5T7V8 394 aa23.08■■□□□ 1.29
PRPF40B-206ENST00000547764 ABT1Q9ULW3 272 aaKnown RBP23.08■■□□□ 1.29
PRPF40B-206ENST00000547764 SUGT1Q9Y2Z0 365 aa23.08■■□□□ 1.29
PRPF40B-206ENST00000547764 RASGRF1Q13972 1273 aa23.07■■□□□ 1.28
PRPF40B-206ENST00000547764 MKRN1Q9UHC7 482 aaKnown RBP23.07■■□□□ 1.28
PRPF40B-206ENST00000547764 CRKP46108 304 aa23.06■■□□□ 1.28
PRPF40B-206ENST00000547764 HSP90AB4PQ58FF6 505 aa23.06■■□□□ 1.28
PRPF40B-206ENST00000547764 ERC1Q8IUD2 1116 aa23.06■■□□□ 1.28
PRPF40B-206ENST00000547764 CDCA5Q96FF9 252 aa23.06■■□□□ 1.28
PRPF40B-206ENST00000547764 AOX1Q06278 1338 aa23.06■■□□□ 1.28
PRPF40B-206ENST00000547764 MYO1BO43795 1136 aa23.05■■□□□ 1.28
PRPF40B-206ENST00000547764 HDLBPQ00341 1268 aaKnown RBP23.05■■□□□ 1.28
PRPF40B-206ENST00000547764 DBNDD2Q9BQY9 259 aa23.05■■□□□ 1.28
PRPF40B-206ENST00000547764 SALL1Q9NSC2 1324 aa23.05■■□□□ 1.28
PRPF40B-206ENST00000547764 CNTNAP1P78357 1384 aa23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 CLRN2A0PK11 232 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms