RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RUSC1Q9BVN2 902 aa7.54□□□□□ -1.2
SCAF11-210ENST00000547654 OSGEPQ9NPF4 335 aa7.54□□□□□ -1.2
SCAF11-210ENST00000547654 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
SCAF11-210ENST00000547654 ADAMTS4O75173 837 aa7.53□□□□□ -1.2
SCAF11-210ENST00000547654 WNT11O96014 354 aa7.53□□□□□ -1.2
SCAF11-210ENST00000547654 RPLP1P05386 114 aaKnown RBP7.53□□□□□ -1.2
SCAF11-210ENST00000547654 PCSK2P16519 638 aa7.53□□□□□ -1.2
SCAF11-210ENST00000547654 CES1P23141 567 aa7.53□□□□□ -1.2
SCAF11-210ENST00000547654 ARL4DP49703 201 aa7.53□□□□□ -1.2
SCAF11-210ENST00000547654 TTC16Q8NEE8 873 aa7.53□□□□□ -1.2
SCAF11-210ENST00000547654 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
SCAF11-210ENST00000547654 HELQQ8TDG4 1101 aa7.52□□□□□ -1.21
SCAF11-210ENST00000547654 KRTAP4-11Q9BYQ6 195 aa7.52□□□□□ -1.21
SCAF11-210ENST00000547654 WDR64B1ANS9 1081 aa7.51□□□□□ -1.21
SCAF11-210ENST00000547654 PDE2AO00408 941 aaPredicted RBP7.51□□□□□ -1.21
SCAF11-210ENST00000547654 ACPPP15309 386 aa7.51□□□□□ -1.21
SCAF11-210ENST00000547654 ATCAYQ86WG3 371 aa7.51□□□□□ -1.21
SCAF11-210ENST00000547654 MFSD14AQ96MC6 490 aa7.51□□□□□ -1.21
SCAF11-210ENST00000547654 CNTN3Q9P232 1028 aa7.51□□□□□ -1.21
SCAF11-210ENST00000547654 DNM1Q05193 864 aaKnown RBP7.5□□□□□ -1.21
SCAF11-210ENST00000547654 C19orf57Q0VDD7 668 aa7.5□□□□□ -1.21
SCAF11-210ENST00000547654 EDEM1Q92611 657 aa7.5□□□□□ -1.21
SCAF11-210ENST00000547654 SALL4Q9UJQ4 1053 aa7.5□□□□□ -1.21
SCAF11-210ENST00000547654 ANGEL1Q9UNK9 670 aaKnown RBP7.5□□□□□ -1.21
SCAF11-210ENST00000547654 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
SCAF11-210ENST00000547654 MAP4P27816 1152 aaKnown RBP7.49□□□□□ -1.21
SCAF11-210ENST00000547654 RXRBP28702 533 aa7.49□□□□□ -1.21
SCAF11-210ENST00000547654 NUTM2GQ5VZR2 741 aa7.49□□□□□ -1.21
SCAF11-210ENST00000547654 C1orf127Q8N9H9 656 aa7.49□□□□□ -1.21
SCAF11-210ENST00000547654 USP26Q9BXU7 913 aa7.49□□□□□ -1.21
SCAF11-210ENST00000547654 ATG3Q9NT62 314 aa7.49□□□□□ -1.21
SCAF11-210ENST00000547654 DZANK1Q9NVP4 752 aa7.49□□□□□ -1.21
SCAF11-210ENST00000547654 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
SCAF11-210ENST00000547654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-210ENST00000547654 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
SCAF11-210ENST00000547654 SGO2Q562F6 1265 aa7.48□□□□□ -1.21
SCAF11-210ENST00000547654 FBXL6Q8N531 539 aa7.48□□□□□ -1.21
SCAF11-210ENST00000547654 GTF3C2Q8WUA4 911 aaPredicted RBP7.48□□□□□ -1.21
SCAF11-210ENST00000547654 SOX13Q9UN79 622 aa7.48□□□□□ -1.21
SCAF11-210ENST00000547654 LEMD3Q9Y2U8 911 aa7.48□□□□□ -1.21
SCAF11-210ENST00000547654 TRPA1O75762 1119 aa7.47□□□□□ -1.21
SCAF11-210ENST00000547654 MTMR3Q13615 1198 aa7.47□□□□□ -1.21
SCAF11-210ENST00000547654 IKBKEQ14164 716 aa7.47□□□□□ -1.21
SCAF11-210ENST00000547654 XKR5Q6UX68 686 aa7.47□□□□□ -1.21
SCAF11-210ENST00000547654 PMEPA1Q969W9 287 aa7.47□□□□□ -1.21
SCAF11-210ENST00000547654 HHIPQ96QV1 700 aa7.47□□□□□ -1.21
SCAF11-210ENST00000547654 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
SCAF11-210ENST00000547654 MEGF11A6BM72 1044 aa7.46□□□□□ -1.22
SCAF11-210ENST00000547654 NFKBIEO00221 500 aa7.46□□□□□ -1.22
SCAF11-210ENST00000547654 PDGFAP04085 211 aa7.46□□□□□ -1.22
SCAF11-210ENST00000547654 HOXA10P31260 410 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-210ENST00000547654 TMEM102Q8N9M5 508 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-210ENST00000547654 C12orf50Q8NA57 414 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-210ENST00000547654 BSNDQ8WZ55 320 aa7.46□□□□□ -1.22
SCAF11-210ENST00000547654 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
SCAF11-210ENST00000547654 GGNBP2Q9H3C7 697 aa7.46□□□□□ -1.22
SCAF11-210ENST00000547654 CYP4F12Q9HCS2 524 aa7.46□□□□□ -1.22
SCAF11-210ENST00000547654 A6NHS1 94 aa7.45□□□□□ -1.22
SCAF11-210ENST00000547654 FZD6O60353 706 aa7.45□□□□□ -1.22
SCAF11-210ENST00000547654 MPSTP25325 297 aa7.45□□□□□ -1.22
SCAF11-210ENST00000547654 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
SCAF11-210ENST00000547654 TXNDC2Q86VQ3 553 aa7.45□□□□□ -1.22
SCAF11-210ENST00000547654 OSMRQ99650 979 aa7.45□□□□□ -1.22
SCAF11-210ENST00000547654 ADGRE2Q9UHX3 823 aa7.45□□□□□ -1.22
SCAF11-210ENST00000547654 MZF1P28698 734 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-210ENST00000547654 EIF1AXP47813 144 aaKnown RBP7.44□□□□□ -1.22
SCAF11-210ENST00000547654 CPSF6Q16630 551 aaKnown RBP eCLIP7.44□□□□□ -1.22
SCAF11-210ENST00000547654 HGSNATQ68CP4 663 aa7.44□□□□□ -1.22
SCAF11-210ENST00000547654 PAOXQ6QHF9 649 aa7.44□□□□□ -1.22
SCAF11-210ENST00000547654 ABI1Q8IZP0 508 aa7.44□□□□□ -1.22
SCAF11-210ENST00000547654 RETREG2Q8NC44 543 aa7.44□□□□□ -1.22
SCAF11-210ENST00000547654 ARID3AQ99856 593 aa7.44□□□□□ -1.22
SCAF11-210ENST00000547654 ZKSCAN3Q9BRR0 538 aa7.44□□□□□ -1.22
SCAF11-210ENST00000547654 CHRDQ9H2X0 955 aa7.44□□□□□ -1.22
SCAF11-210ENST00000547654 LOC100289279A0A1B0GTE1 492 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 FAM95CA0A1B0GW59 222 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 PHACTR2O75167 634 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 EDN3P14138 238 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 FOSL1P15407 271 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 USP11P51784 963 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 SMG8Q8ND04 991 aaKnown RBP7.43□□□□□ -1.22
SCAF11-210ENST00000547654 ASAP3Q8TDY4 903 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 METTL22Q9BUU2 404 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-210ENST00000547654 TMPRSS13Q9BYE2 586 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 SUGCTQ9HAC7 445 aa7.43□□□□□ -1.22
SCAF11-210ENST00000547654 SOX1O00570 391 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-210ENST00000547654 TIAF1O95411 115 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 IGHA2P01877 340 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 F13BP05160 661 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 TRIM26Q12899 539 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-210ENST00000547654 NFKBIBQ15653 356 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 VN1R5Q7Z5H4 357 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 VSIG10LQ86VR7 867 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 NXPE3Q969Y0 559 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 YIPF2Q9BWQ6 316 aa7.42□□□□□ -1.22
SCAF11-210ENST00000547654 AAMPQ13685 434 aa7.41□□□□□ -1.22
SCAF11-210ENST00000547654 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
SCAF11-210ENST00000547654 SNX29Q8TEQ0 813 aa7.41□□□□□ -1.22
SCAF11-210ENST00000547654 SOX17Q9H6I2 414 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-210ENST00000547654 EGFL7Q9UHF1 273 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms