RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 BCAMP50895 628 aa14.68□□□□□ -0.06
RAB5C-204ENST00000547517 MVPQ14764 893 aaKnown RBP14.68□□□□□ -0.06
RAB5C-204ENST00000547517 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
RAB5C-204ENST00000547517 FBXO33Q7Z6M2 555 aa14.68□□□□□ -0.06
RAB5C-204ENST00000547517 PGAP2Q9UHJ9 254 aa14.68□□□□□ -0.06
RAB5C-204ENST00000547517 HDAC9Q9UKV0 1011 aa14.68□□□□□ -0.06
RAB5C-204ENST00000547517 COG6Q9Y2V7 657 aa14.68□□□□□ -0.06
RAB5C-204ENST00000547517 TMEM88BA6NKF7 163 aa14.67□□□□□ -0.06
RAB5C-204ENST00000547517 SASH1O94885 1247 aa14.67□□□□□ -0.06
RAB5C-204ENST00000547517 CHAF1AQ13111 956 aaPredicted RBP14.67□□□□□ -0.06
RAB5C-204ENST00000547517 SCARF1Q14162 830 aa14.67□□□□□ -0.06
RAB5C-204ENST00000547517 DCPSQ96C86 337 aaKnown RBP14.67□□□□□ -0.06
RAB5C-204ENST00000547517 FAM205AQ6ZU69 1335 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 ADM5C9JUS6 153 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 FKBP1AP62942 108 aaKnown RBP14.66□□□□□ -0.06
RAB5C-204ENST00000547517 TFCP2Q12800 502 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 MFSD14BQ5SR56 506 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 ANGEL2Q5VTE6 544 aaKnown RBP14.66□□□□□ -0.06
RAB5C-204ENST00000547517 CDC37L1Q7L3B6 337 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 KRT26Q7Z3Y9 468 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.66□□□□□ -0.06
RAB5C-204ENST00000547517 ZNF408Q9H9D4 720 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 DDX19BQ9UMR2 479 aa14.66□□□□□ -0.06
RAB5C-204ENST00000547517 TRPM7Q96QT4 1865 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 COL1A1P02452 1464 aaPredicted RBP14.65□□□□□ -0.06
RAB5C-204ENST00000547517 MYH13Q9UKX3 1938 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 CAPN15O75808 1086 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 ADORA1P30542 326 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 ATP8B2P98198 1209 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 POLA2Q14181 598 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 NBPF9Q3BBW0 867 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 C20orf194Q5TEA3 1177 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 CEP85Q6P2H3 762 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 DLK2Q6UY11 383 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 USP48Q86UV5 1035 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 SULF1Q8IWU6 871 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 DNAJC5GQ8N7S2 189 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 KLRG1Q96E93 195 aa14.65□□□□□ -0.06
RAB5C-204ENST00000547517 MKRN1Q9UHC7 482 aaKnown RBP14.65□□□□□ -0.06
RAB5C-204ENST00000547517 ABT1Q9ULW3 272 aaKnown RBP14.65□□□□□ -0.06
RAB5C-204ENST00000547517 WNT10BO00744 389 aa14.64□□□□□ -0.07
RAB5C-204ENST00000547517 CELF2O95319 508 aaKnown RBP14.64□□□□□ -0.07
RAB5C-204ENST00000547517 G3BP1Q13283 466 aaKnown RBP eCLIP14.64□□□□□ -0.073e-6■■□□□ 13.8
RAB5C-204ENST00000547517 OS9Q13438 667 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-204ENST00000547517 SSH3Q8TE77 659 aa14.64□□□□□ -0.07
RAB5C-204ENST00000547517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-204ENST00000547517 A0A1B0GUL7 405 aa14.63□□□□□ -0.07
RAB5C-204ENST00000547517 PHKA1P46020 1223 aa14.63□□□□□ -0.07
RAB5C-204ENST00000547517 MMP14P50281 582 aa14.63□□□□□ -0.07
RAB5C-204ENST00000547517 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
RAB5C-204ENST00000547517 SCAF8Q9UPN6 1271 aaKnown RBP14.63□□□□□ -0.07
RAB5C-204ENST00000547517 AKAP2Q9Y2D5 859 aa14.63□□□□□ -0.07
RAB5C-204ENST00000547517 PCDHAC2Q9Y5I4 1007 aa14.63□□□□□ -0.07
RAB5C-204ENST00000547517 PITPNM2Q9BZ72 1349 aa14.63□□□□□ -0.07
RAB5C-204ENST00000547517 CNTNAP1P78357 1384 aa14.62□□□□□ -0.07
RAB5C-204ENST00000547517 SURF6O75683 361 aaKnown RBP14.62□□□□□ -0.07
RAB5C-204ENST00000547517 RBM5P52756 815 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB5C-204ENST00000547517 TIMM10P62072 90 aa14.62□□□□□ -0.07
RAB5C-204ENST00000547517 PDE3AQ14432 1141 aa14.62□□□□□ -0.07
RAB5C-204ENST00000547517 DLGAP5Q15398 846 aa14.62□□□□□ -0.07
RAB5C-204ENST00000547517 CFAP100Q494V2 611 aa14.62□□□□□ -0.07
RAB5C-204ENST00000547517 CST9Q5W186 159 aa14.62□□□□□ -0.07
RAB5C-204ENST00000547517 TBC1D22AQ8WUA7 517 aa14.62□□□□□ -0.07
RAB5C-204ENST00000547517 GNL3LQ9NVN8 582 aaKnown RBP14.62□□□□□ -0.07
RAB5C-204ENST00000547517 TTF2Q9UNY4 1162 aaKnown RBP14.62□□□□□ -0.07
RAB5C-204ENST00000547517 GRIK5Q16478 980 aa14.61□□□□□ -0.07
RAB5C-204ENST00000547517 CCDC102BQ68D86 513 aa14.61□□□□□ -0.07
RAB5C-204ENST00000547517 XAGE2Q96GT9 111 aa14.61□□□□□ -0.07
RAB5C-204ENST00000547517 ZBED3Q96IU2 234 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-204ENST00000547517 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
RAB5C-204ENST00000547517 ZBTB40Q9NUA8 1239 aa14.61□□□□□ -0.07
RAB5C-204ENST00000547517 POLR2AP24928 1970 aaKnown RBP14.6□□□□□ -0.07
RAB5C-204ENST00000547517 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
RAB5C-204ENST00000547517 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
RAB5C-204ENST00000547517 PAXIP1Q6ZW49 1069 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-204ENST00000547517 CDCA5Q96FF9 252 aa14.6□□□□□ -0.07
RAB5C-204ENST00000547517 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
RAB5C-204ENST00000547517 ECM29Q5VYK3 1845 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 CLRN2A0PK11 232 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 CRKP46108 304 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
RAB5C-204ENST00000547517 RASGRF1Q13972 1273 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 APOBEC3FQ8IUX4 373 aaKnown RBP14.59□□□□□ -0.07
RAB5C-204ENST00000547517 MTMR14Q8NCE2 650 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 EXOC6BQ9Y2D4 811 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 NOP58Q9Y2X3 529 aaKnown RBP14.59□□□□□ -0.07
RAB5C-204ENST00000547517 TLL2Q9Y6L7 1015 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 AOX1Q06278 1338 aa14.59□□□□□ -0.07
RAB5C-204ENST00000547517 SEMA3EO15041 775 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 MYO1BO43795 1136 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 GRM1Q13255 1194 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 TNNI3KQ59H18 835 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 GORABQ5T7V8 394 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 PRMT6Q96LA8 375 aaPredicted RBP14.58□□□□□ -0.08
RAB5C-204ENST00000547517 VEZTQ9HBM0 779 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 DENND2AQ9ULE3 1009 aa14.58□□□□□ -0.08
RAB5C-204ENST00000547517 FPGT-TNNI3KV9GXZ4 949 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms