RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 TMOD3Q9NYL9 352 aa17.07■□□□□ 0.32
LETMD1-209ENST00000547318 SNW1Q13573 536 aaKnown RBP17.06■□□□□ 0.32
LETMD1-209ENST00000547318 SYCP1Q15431 976 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 RALYLQ86SE5 291 aaKnown RBP17.06■□□□□ 0.32
LETMD1-209ENST00000547318 MB21D2Q8IYB1 491 aaPredicted RBP17.06■□□□□ 0.32
LETMD1-209ENST00000547318 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 BPIFA3Q9BQP9 254 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 PYCARDQ9ULZ3 195 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 CDKL5O76039 1030 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 PTGS1P23219 599 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 ZMYM6O95789 1325 aa17.06■□□□□ 0.32
LETMD1-209ENST00000547318 CHGBP05060 677 aa17.05■□□□□ 0.32
LETMD1-209ENST00000547318 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
LETMD1-209ENST00000547318 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
LETMD1-209ENST00000547318 CCDC186Q7Z3E2 898 aa17.05■□□□□ 0.32
LETMD1-209ENST00000547318 ZNF594Q96JF6 807 aaPredicted RBP17.05■□□□□ 0.32
LETMD1-209ENST00000547318 C8orf76Q96K31 380 aa17.05■□□□□ 0.32
LETMD1-209ENST00000547318 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
LETMD1-209ENST00000547318 RIC1Q4ADV7 1423 aa17.05■□□□□ 0.32
LETMD1-209ENST00000547318 BECN2A8MW95 431 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 ZNF213O14771 459 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 DTNBO60941 627 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 ME1P48163 572 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 GIGYF2Q6Y7W6 1299 aaKnown RBP17.04■□□□□ 0.32
LETMD1-209ENST00000547318 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 PAXBP1Q9Y5B6 917 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 MYH3P11055 1940 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 ARAP2Q8WZ64 1704 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 PRC1O43663 620 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
LETMD1-209ENST00000547318 TRDNQ13061 729 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 AK7Q96M32 723 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
LETMD1-209ENST00000547318 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
LETMD1-209ENST00000547318 LRP5O75197 1615 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 FGAP02671 866 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 UQCRFS1P1P0C7P4 283 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 GSDMDP57764 484 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 UBE3CQ15386 1083 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 CPLX2Q6PUV4 134 aaKnown RBP17.03■□□□□ 0.32
LETMD1-209ENST00000547318 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
LETMD1-209ENST00000547318 CPLX1O14810 134 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 FDPSP14324 419 aaKnown RBP17.03■□□□□ 0.32
LETMD1-209ENST00000547318 LINC00301Q8NCQ3 95 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 KCND1Q9NSA2 647 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 IMPACTQ9P2X3 320 aa17.03■□□□□ 0.32
LETMD1-209ENST00000547318 ANKRD18BA2A2Z9 1011 aa17.02■□□□□ 0.32
LETMD1-209ENST00000547318 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
LETMD1-209ENST00000547318 STK38Q15208 465 aa17.02■□□□□ 0.32
LETMD1-209ENST00000547318 ZRSR1Q15695 479 aaKnown RBP17.02■□□□□ 0.32
LETMD1-209ENST00000547318 ILDR1Q86SU0 546 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-209ENST00000547318 GOLPH3LQ9H4A5 285 aa17.02■□□□□ 0.32
LETMD1-209ENST00000547318 NCOA5Q9HCD5 579 aaKnown RBP17.02■□□□□ 0.32
LETMD1-209ENST00000547318 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-209ENST00000547318 NAP1L2Q9ULW6 460 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-209ENST00000547318 RIPOR2Q9Y4F9 1068 aa17.02■□□□□ 0.32
LETMD1-209ENST00000547318 NHSL1Q5SYE7 1610 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 KLF18A0A0U1RQI7 1052 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 FOXP2O15409 715 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 GPAA1O43292 621 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 CTIFO43310 598 aaKnown RBP17.01■□□□□ 0.31
LETMD1-209ENST00000547318 ADD2P35612 726 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 TPM4P67936 248 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 SF3A1Q15459 793 aaKnown RBP17.01■□□□□ 0.31
LETMD1-209ENST00000547318 MPNDQ8N594 471 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 TMEM87BQ96K49 555 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 TIGD1Q96MW7 591 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
LETMD1-209ENST00000547318 ZAP70P43403 619 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 ALX1Q15699 326 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
LETMD1-209ENST00000547318 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
LETMD1-209ENST00000547318 AKAP11Q9UKA4 1901 aa17■□□□□ 0.31
LETMD1-209ENST00000547318 KIF2AO00139 706 aaPredicted RBP17■□□□□ 0.31
LETMD1-209ENST00000547318 MYSM1Q5VVJ2 828 aa17■□□□□ 0.31
LETMD1-209ENST00000547318 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
LETMD1-209ENST00000547318 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
LETMD1-209ENST00000547318 ANGEL1Q9UNK9 670 aaKnown RBP17■□□□□ 0.31
LETMD1-209ENST00000547318 TBC1D2BQ9UPU7 963 aa17■□□□□ 0.31
LETMD1-209ENST00000547318 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
LETMD1-209ENST00000547318 ERVV-1B6SEH8 477 aa16.99■□□□□ 0.31
LETMD1-209ENST00000547318 SPTLC2O15270 562 aa16.99■□□□□ 0.31
LETMD1-209ENST00000547318 MYO1BO43795 1136 aa16.99■□□□□ 0.31
LETMD1-209ENST00000547318 ARID4AP29374 1257 aaPredicted RBP16.99■□□□□ 0.31
LETMD1-209ENST00000547318 ADORA1P30542 326 aa16.99■□□□□ 0.31
LETMD1-209ENST00000547318 CTSWP56202 376 aa16.99■□□□□ 0.31
LETMD1-209ENST00000547318 EVA1CP58658 441 aa16.99■□□□□ 0.31
LETMD1-209ENST00000547318 CEBPZQ03701 1054 aaKnown RBP16.99■□□□□ 0.31
LETMD1-209ENST00000547318 C11orf57Q6ZUT1 292 aaPredicted RBP16.99■□□□□ 0.31
LETMD1-209ENST00000547318 C17orf53Q8N3J3 647 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms