RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 MDFIQ99750 246 aa9.93□□□□□ -0.82
NPAS3-204ENST00000546849 GPN3Q9UHW5 284 aaPredicted RBP9.93□□□□□ -0.82
NPAS3-204ENST00000546849 PTPN12Q05209 780 aaKnown RBP9.92□□□□□ -0.82
NPAS3-204ENST00000546849 WFDC8Q8IUA0 241 aa9.92□□□□□ -0.82
NPAS3-204ENST00000546849 DDX54Q8TDD1 881 aaKnown RBP9.92□□□□□ -0.82
NPAS3-204ENST00000546849 TTC9Q92623 222 aa9.92□□□□□ -0.82
NPAS3-204ENST00000546849 CEP44Q9C0F1 390 aa9.92□□□□□ -0.82
NPAS3-204ENST00000546849 CNTNAP5Q8WYK1 1306 aa9.91□□□□□ -0.82
NPAS3-204ENST00000546849 CDC25BP30305 580 aa9.91□□□□□ -0.82
NPAS3-204ENST00000546849 CCDC85BQ15834 202 aaPredicted RBP9.91□□□□□ -0.82
NPAS3-204ENST00000546849 MEI1Q5TIA1 1274 aa9.91□□□□□ -0.82
NPAS3-204ENST00000546849 GPAT2Q6NUI2 795 aa9.91□□□□□ -0.82
NPAS3-204ENST00000546849 C1orf229Q6ZS94 237 aaPredicted RBP9.91□□□□□ -0.82
NPAS3-204ENST00000546849 IL22RA1Q8N6P7 574 aa9.91□□□□□ -0.82
NPAS3-204ENST00000546849 RNF34Q969K3 372 aa9.91□□□□□ -0.82
NPAS3-204ENST00000546849 CLEC4MQ9H2X3 399 aaPredicted RBP9.91□□□□□ -0.82
NPAS3-204ENST00000546849 METTL5Q9NRN9 209 aaKnown RBP9.91□□□□□ -0.82
NPAS3-204ENST00000546849 STARD13Q9Y3M8 1113 aa9.91□□□□□ -0.82
NPAS3-204ENST00000546849 SHISA8B8ZZ34 492 aa9.9□□□□□ -0.82
NPAS3-204ENST00000546849 CTSHP09668 335 aa9.9□□□□□ -0.82
NPAS3-204ENST00000546849 ITPKAP23677 461 aa9.9□□□□□ -0.82
NPAS3-204ENST00000546849 ST13P50502 369 aaKnown RBP9.9□□□□□ -0.82
NPAS3-204ENST00000546849 PPP2R3AQ06190 1150 aa9.9□□□□□ -0.82
NPAS3-204ENST00000546849 TPTE2Q6XPS3 522 aa9.9□□□□□ -0.82
NPAS3-204ENST00000546849 MUC3BQ9H195 1237 aa9.9□□□□□ -0.82
NPAS3-204ENST00000546849 ZNF576Q9H609 170 aa9.9□□□□□ -0.82
NPAS3-204ENST00000546849 IGHA1P01876 353 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 ARL4DP49703 201 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 PCDH1Q08174 1060 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 IKBKEQ14164 716 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 RPS26P11Q5JNZ5 115 aaPredicted RBP9.89□□□□□ -0.83
NPAS3-204ENST00000546849 HS2ST1Q7LGA3 356 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 C3orf58Q8NDZ4 430 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 ADAM19Q9H013 955 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 SH2B1Q9NRF2 756 aaPredicted RBP9.89□□□□□ -0.83
NPAS3-204ENST00000546849 PPME1Q9Y570 386 aa9.89□□□□□ -0.83
NPAS3-204ENST00000546849 H3BRJ5 948 aa9.88□□□□□ -0.83
NPAS3-204ENST00000546849 FBXO24O75426 580 aa9.88□□□□□ -0.83
NPAS3-204ENST00000546849 AFF1P51825 1210 aaKnown RBP9.88□□□□□ -0.83
NPAS3-204ENST00000546849 GGT7Q9UJ14 662 aa9.88□□□□□ -0.83
NPAS3-204ENST00000546849 SOX13Q9UN79 622 aa9.88□□□□□ -0.83
NPAS3-204ENST00000546849 USP31Q70CQ4 1352 aa9.88□□□□□ -0.83
NPAS3-204ENST00000546849 PIK3R2O00459 728 aa9.87□□□□□ -0.83
NPAS3-204ENST00000546849 LMNB1P20700 586 aa9.87□□□□□ -0.83
NPAS3-204ENST00000546849 C20orf204Q6ZNR8 217 aa9.87□□□□□ -0.83
NPAS3-204ENST00000546849 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
NPAS3-204ENST00000546849 BEND7Q8N7W2 519 aaPredicted RBP9.87□□□□□ -0.83
NPAS3-204ENST00000546849 SLC7A3Q8WY07 619 aa9.87□□□□□ -0.83
NPAS3-204ENST00000546849 SAMM50Q9Y512 469 aa9.87□□□□□ -0.83
NPAS3-204ENST00000546849 EPHA1P21709 976 aa9.86□□□□□ -0.83
NPAS3-204ENST00000546849 ERCC5P28715 1186 aaPredicted RBP9.86□□□□□ -0.83
NPAS3-204ENST00000546849 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
NPAS3-204ENST00000546849 RLBP1P12271 317 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 ZNF157P51786 506 aaPredicted RBP9.85□□□□□ -0.83
NPAS3-204ENST00000546849 FANCCQ00597 558 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 C9orf131Q5VYM1 1079 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 MSL1Q68DK7 614 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 TXNDC11Q6PKC3 985 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 SV2BQ7L1I2 683 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 PODNQ7Z5L7 613 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 DCAF5Q96JK2 942 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
NPAS3-204ENST00000546849 SPDYE3A6NKU9 549 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 LINC01387J3KSC0 135 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 ITGB2P05107 769 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 HDLBPQ00341 1268 aaKnown RBP9.84□□□□□ -0.83
NPAS3-204ENST00000546849 PWP1Q13610 501 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 DIEXFQ68CQ4 756 aaKnown RBP9.84□□□□□ -0.83
NPAS3-204ENST00000546849 VN1R5Q7Z5H4 357 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 NOC4LQ9BVI4 516 aaKnown RBP9.84□□□□□ -0.83
NPAS3-204ENST00000546849 SEC31BQ9NQW1 1179 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 PRDM6Q9NQX0 595 aa9.84□□□□□ -0.83
NPAS3-204ENST00000546849 PIP4K2BP78356 416 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 GRIK5Q16478 980 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 MAP3K11Q16584 847 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 PLA2G4EQ3MJ16 856 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 NT5DC4Q86YG4 428 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 RELL1Q8IUW5 271 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 DMRTC2Q8IXT2 367 aaPredicted RBP9.83□□□□□ -0.84
NPAS3-204ENST00000546849 DCAF11Q8TEB1 546 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 CCSER2Q9H7U1 834 aa9.83□□□□□ -0.84
NPAS3-204ENST00000546849 B3GALT4O96024 378 aa9.82□□□□□ -0.84
NPAS3-204ENST00000546849 ESRRAP11474 423 aaPredicted RBP9.82□□□□□ -0.84
NPAS3-204ENST00000546849 DGKGP49619 791 aa9.82□□□□□ -0.84
NPAS3-204ENST00000546849 RAC1P63000 192 aa9.82□□□□□ -0.84
NPAS3-204ENST00000546849 HNRNPUQ00839 825 aaKnown RBP eCLIP9.82□□□□□ -0.84
NPAS3-204ENST00000546849 GSTM4Q03013 218 aa9.82□□□□□ -0.84
NPAS3-204ENST00000546849 C19orf57Q0VDD7 668 aa9.82□□□□□ -0.84
NPAS3-204ENST00000546849 ANKRD24Q8TF21 1146 aa9.82□□□□□ -0.84
NPAS3-204ENST00000546849 WNT8BQ93098 351 aa9.82□□□□□ -0.84
NPAS3-204ENST00000546849 CELA3AP09093 270 aa9.81□□□□□ -0.84
NPAS3-204ENST00000546849 FAAP100Q0VG06 881 aa9.81□□□□□ -0.84
NPAS3-204ENST00000546849 LDLRAD1Q5T700 205 aa9.81□□□□□ -0.84
NPAS3-204ENST00000546849 USP48Q86UV5 1035 aa9.81□□□□□ -0.84
NPAS3-204ENST00000546849 MAP4K3Q8IVH8 894 aa9.81□□□□□ -0.84
NPAS3-204ENST00000546849 CBX8Q9HC52 389 aa9.81□□□□□ -0.84
NPAS3-204ENST00000546849 SRA1Q9HD15 236 aaKnown RBP9.81□□□□□ -0.84
NPAS3-204ENST00000546849 MKL2Q9ULH7 1088 aa9.81□□□□□ -0.84
NPAS3-204ENST00000546849 SNRPNP63162 240 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms