RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 MS4A1P11836 297 aa20.79■□□□□ 0.92
R3HDM2-209ENST00000546843 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
R3HDM2-209ENST00000546843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.79■□□□□ 0.92
R3HDM2-209ENST00000546843 ADM5C9JUS6 153 aa20.78■□□□□ 0.92
R3HDM2-209ENST00000546843 SASH1O94885 1247 aa20.78■□□□□ 0.92
R3HDM2-209ENST00000546843 TFCP2Q12800 502 aa20.78■□□□□ 0.92
R3HDM2-209ENST00000546843 SCARF1Q14162 830 aa20.78■□□□□ 0.92
R3HDM2-209ENST00000546843 USP48Q86UV5 1035 aa20.78■□□□□ 0.92
R3HDM2-209ENST00000546843 OGFOD1Q8N543 542 aa20.78■□□□□ 0.92
R3HDM2-209ENST00000546843 CREBZFQ9NS37 354 aa20.78■□□□□ 0.92
R3HDM2-209ENST00000546843 TMEM88BA6NKF7 163 aa20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 FRAT2O75474 233 aaPredicted RBP20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 ADORA1P30542 326 aa20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 POLA2Q14181 598 aa20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 KRT26Q7Z3Y9 468 aa20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 DNAJC5GQ8N7S2 189 aa20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 ZNF408Q9H9D4 720 aa20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 HDAC9Q9UKV0 1011 aa20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 SCAF8Q9UPN6 1271 aaKnown RBP20.77■□□□□ 0.92
R3HDM2-209ENST00000546843 FAM205AQ6ZU69 1335 aa20.77■□□□□ 0.91
R3HDM2-209ENST00000546843 ATP8B2P98198 1209 aa20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 NBPF9Q3BBW0 867 aa20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 MFSD14BQ5SR56 506 aa20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 ANGEL2Q5VTE6 544 aaKnown RBP20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 CEP85Q6P2H3 762 aa20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 CDC37L1Q7L3B6 337 aa20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 DCPSQ96C86 337 aaKnown RBP20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 PCDHAC2Q9Y5I4 1007 aa20.76■□□□□ 0.91
R3HDM2-209ENST00000546843 COL1A1P02452 1464 aaPredicted RBP20.75■□□□□ 0.91
R3HDM2-209ENST00000546843 GRIK5Q16478 980 aa20.75■□□□□ 0.91
R3HDM2-209ENST00000546843 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.75■□□□□ 0.91
R3HDM2-209ENST00000546843 SSH3Q8TE77 659 aa20.75■□□□□ 0.91
R3HDM2-209ENST00000546843 KLRG1Q96E93 195 aa20.75■□□□□ 0.91
R3HDM2-209ENST00000546843 MKRN1Q9UHC7 482 aaKnown RBP20.75■□□□□ 0.91
R3HDM2-209ENST00000546843 WNT10BO00744 389 aa20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 CELF2O95319 508 aaKnown RBP20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 PHKA1P46020 1223 aa20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 TIMM10P62072 90 aa20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 FKBP1AP62942 108 aaKnown RBP20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 G3BP1Q13283 466 aaKnown RBP eCLIP20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 CST9Q5W186 159 aa20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 DDX19BQ9UMR2 479 aa20.74■□□□□ 0.91
R3HDM2-209ENST00000546843 A0A1B0GUL7 405 aa20.73■□□□□ 0.91
R3HDM2-209ENST00000546843 OS9Q13438 667 aaPredicted RBP20.73■□□□□ 0.91
R3HDM2-209ENST00000546843 SULF1Q8IWU6 871 aa20.73■□□□□ 0.91
R3HDM2-209ENST00000546843 ABT1Q9ULW3 272 aaKnown RBP20.73■□□□□ 0.91
R3HDM2-209ENST00000546843 SURF6O75683 361 aaKnown RBP20.72■□□□□ 0.91
R3HDM2-209ENST00000546843 TTF2Q9UNY4 1162 aaKnown RBP20.72■□□□□ 0.91
R3HDM2-209ENST00000546843 CEP350Q5VT06 3117 aa20.71■□□□□ 0.91
R3HDM2-209ENST00000546843 DLGAP5Q15398 846 aa20.71■□□□□ 0.91
R3HDM2-209ENST00000546843 CFAP100Q494V2 611 aa20.71■□□□□ 0.91
R3HDM2-209ENST00000546843 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
R3HDM2-209ENST00000546843 AOX1Q06278 1338 aa20.71■□□□□ 0.91
R3HDM2-209ENST00000546843 ARAP2Q8WZ64 1704 aa20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 RBM5P52756 815 aaKnown RBP eCLIP20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 PDE3AQ14432 1141 aa20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 XAGE2Q96GT9 111 aa20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 ZBED3Q96IU2 234 aaPredicted RBP20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 NEUROD6Q96NK8 337 aa20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 AKAP2Q9Y2D5 859 aa20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 CNTNAP1P78357 1384 aa20.7■□□□□ 0.9
R3HDM2-209ENST00000546843 TBC1D22AQ8WUA7 517 aa20.69■□□□□ 0.9
R3HDM2-209ENST00000546843 CDCA5Q96FF9 252 aa20.69■□□□□ 0.9
R3HDM2-209ENST00000546843 PITPNM2Q9BZ72 1349 aa20.69■□□□□ 0.9
R3HDM2-209ENST00000546843 CLRN2A0PK11 232 aa20.68■□□□□ 0.9
R3HDM2-209ENST00000546843 MMP14P50281 582 aa20.68■□□□□ 0.9
R3HDM2-209ENST00000546843 PRAMEF18Q5VWM3 479 aa20.68■□□□□ 0.9
R3HDM2-209ENST00000546843 GNL3LQ9NVN8 582 aaKnown RBP20.68■□□□□ 0.9
R3HDM2-209ENST00000546843 EXOC6BQ9Y2D4 811 aa20.68■□□□□ 0.9
R3HDM2-209ENST00000546843 SPDYE2BA6NHP3 402 aa20.67■□□□□ 0.9
R3HDM2-209ENST00000546843 SPDYE6P0CI01 402 aa20.67■□□□□ 0.9
R3HDM2-209ENST00000546843 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
R3HDM2-209ENST00000546843 PAXIP1Q6ZW49 1069 aaPredicted RBP20.67■□□□□ 0.9
R3HDM2-209ENST00000546843 PRMT6Q96LA8 375 aaPredicted RBP20.67■□□□□ 0.9
R3HDM2-209ENST00000546843 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
R3HDM2-209ENST00000546843 RASSF10A6NK89 507 aa20.66■□□□□ 0.9
R3HDM2-209ENST00000546843 CRKP46108 304 aa20.66■□□□□ 0.9
R3HDM2-209ENST00000546843 RASGRF1Q13972 1273 aa20.66■□□□□ 0.9
R3HDM2-209ENST00000546843 SIRT2Q8IXJ6 389 aa20.66■□□□□ 0.9
R3HDM2-209ENST00000546843 MTMR14Q8NCE2 650 aa20.66■□□□□ 0.9
R3HDM2-209ENST00000546843 TLL2Q9Y6L7 1015 aa20.66■□□□□ 0.9
R3HDM2-209ENST00000546843 TRPM7Q96QT4 1865 aa20.66■□□□□ 0.9
R3HDM2-209ENST00000546843 VEGFBP49765 207 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 GRM1Q13255 1194 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 TNNI3KQ59H18 835 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 GORABQ5T7V8 394 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 WDR66Q8TBY9 1149 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 VEZTQ9HBM0 779 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 SERPINA10Q9UK55 444 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 DENND2AQ9ULE3 1009 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 FPGT-TNNI3KV9GXZ4 949 aa20.65■□□□□ 0.9
R3HDM2-209ENST00000546843 PRDX5P30044 214 aa20.64■□□□□ 0.89
R3HDM2-209ENST00000546843 DEFB115Q30KQ5 88 aa20.64■□□□□ 0.89
R3HDM2-209ENST00000546843 APOBEC3FQ8IUX4 373 aaKnown RBP20.64■□□□□ 0.89
R3HDM2-209ENST00000546843 GBA2Q9HCG7 927 aaPredicted RBP20.64■□□□□ 0.89
R3HDM2-209ENST00000546843 APBB1O00213 710 aa20.63■□□□□ 0.89
R3HDM2-209ENST00000546843 SEMA3EO15041 775 aa20.63■□□□□ 0.89
R3HDM2-209ENST00000546843 MYO1BO43795 1136 aa20.63■□□□□ 0.89
R3HDM2-209ENST00000546843 CYP4F22Q6NT55 531 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms