RNA–Protein interactions for RNA: ENST00000546618.2

SVOP-201, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-201ENST00000546618 DOK7Q18PE1 504 aa20.41■□□□□ 0.86
SVOP-201ENST00000546618 CNTROBQ8N137 903 aa20.41■□□□□ 0.86
SVOP-201ENST00000546618 EVI5LQ96CN4 794 aa20.41■□□□□ 0.86
SVOP-201ENST00000546618 DNAJC2Q99543 621 aaKnown RBP20.41■□□□□ 0.86
SVOP-201ENST00000546618 SNRKQ9NRH2 765 aa20.41■□□□□ 0.86
SVOP-201ENST00000546618 IQSEC3Q9UPP2 1182 aaPredicted RBP20.41■□□□□ 0.86
SVOP-201ENST00000546618 TRIM6-TRIM34B2RNG4 842 aa20.4■□□□□ 0.86
SVOP-201ENST00000546618 ZAP70P43403 619 aa20.4■□□□□ 0.86
SVOP-201ENST00000546618 TTF1Q15361 905 aaPredicted RBP20.4■□□□□ 0.86
SVOP-201ENST00000546618 TICAM2Q86XR7 235 aa20.4■□□□□ 0.86
SVOP-201ENST00000546618 WDR66Q8TBY9 1149 aa20.4■□□□□ 0.86
SVOP-201ENST00000546618 ZNF526Q8TF50 670 aaPredicted RBP20.4■□□□□ 0.86
SVOP-201ENST00000546618 PAG1Q9NWQ8 432 aa20.4■□□□□ 0.86
SVOP-201ENST00000546618 ARFGEF1Q9Y6D6 1849 aa20.39■□□□□ 0.86
SVOP-201ENST00000546618 SDSP20132 328 aa20.39■□□□□ 0.85
SVOP-201ENST00000546618 FAM205AQ6ZU69 1335 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 GOLIM4O00461 696 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 ECE2O60344 883 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 MAP4K4O95819 1239 aaPredicted RBP20.38■□□□□ 0.85
SVOP-201ENST00000546618 CYP2E1P05181 493 aaPredicted RBP20.38■□□□□ 0.85
SVOP-201ENST00000546618 PI16Q6UXB8 463 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 NIM1KQ8IY84 436 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 JDP2Q8WYK2 163 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 RILPL2Q969X0 211 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 DBNDD1Q9H9R9 158 aa20.38■□□□□ 0.85
SVOP-201ENST00000546618 IGSF3O75054 1194 aa20.37■□□□□ 0.85
SVOP-201ENST00000546618 HSPA6P17066 643 aa20.37■□□□□ 0.85
SVOP-201ENST00000546618 LMNB1P20700 586 aa20.37■□□□□ 0.85
SVOP-201ENST00000546618 RASSF7Q02833 373 aa20.37■□□□□ 0.85
SVOP-201ENST00000546618 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
SVOP-201ENST00000546618 TBC1D22AQ8WUA7 517 aa20.37■□□□□ 0.85
SVOP-201ENST00000546618 ZNRF3Q9ULT6 936 aa20.37■□□□□ 0.85
SVOP-201ENST00000546618 SALL1Q9NSC2 1324 aa20.36■□□□□ 0.85
SVOP-201ENST00000546618 KIF3CO14782 793 aa20.36■□□□□ 0.85
SVOP-201ENST00000546618 CHAF1AQ13111 956 aaPredicted RBP20.36■□□□□ 0.85
SVOP-201ENST00000546618 TTLL5Q6EMB2 1281 aa20.36■□□□□ 0.85
SVOP-201ENST00000546618 KBTBD3Q8NAB2 608 aa20.36■□□□□ 0.85
SVOP-201ENST00000546618 NDUFB9Q9Y6M9 179 aa20.36■□□□□ 0.85
SVOP-201ENST00000546618 FER1L6Q2WGJ9 1857 aa20.36■□□□□ 0.85
SVOP-201ENST00000546618 GTF2IP78347 998 aa20.35■□□□□ 0.85
SVOP-201ENST00000546618 LRRFIP1Q32MZ4 808 aaKnown RBP20.35■□□□□ 0.85
SVOP-201ENST00000546618 STRIP1Q5VSL9 837 aa20.35■□□□□ 0.85
SVOP-201ENST00000546618 SPTY2D1Q68D10 685 aaPredicted RBP20.35■□□□□ 0.85
SVOP-201ENST00000546618 EDC3Q96F86 508 aaKnown RBP20.35■□□□□ 0.85
SVOP-201ENST00000546618 ANTXR1Q9H6X2 564 aa20.35■□□□□ 0.85
SVOP-201ENST00000546618 USP17L3A6NCW0 530 aa20.34■□□□□ 0.85
SVOP-201ENST00000546618 USP17L4A6NCW7 530 aa20.34■□□□□ 0.85
SVOP-201ENST00000546618 FKBP1AP62942 108 aaKnown RBP20.34■□□□□ 0.85
SVOP-201ENST00000546618 USP17L1Q7RTZ2 530 aa20.34■□□□□ 0.85
SVOP-201ENST00000546618 FSD1Q9BTV5 496 aa20.34■□□□□ 0.85
SVOP-201ENST00000546618 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.34■□□□□ 0.85
SVOP-201ENST00000546618 COL1A1P02452 1464 aaPredicted RBP20.33■□□□□ 0.85
SVOP-201ENST00000546618 YDJCA8MPS7 323 aa20.33■□□□□ 0.85
SVOP-201ENST00000546618 PRELPP51888 382 aa20.33■□□□□ 0.85
SVOP-201ENST00000546618 MAP3K12Q12852 859 aa20.33■□□□□ 0.85
SVOP-201ENST00000546618 ZSCAN25Q6NSZ9 544 aa20.33■□□□□ 0.85
SVOP-201ENST00000546618 TBC1D9Q6ZT07 1266 aa20.33■□□□□ 0.85
SVOP-201ENST00000546618 PIH1D3Q9NQM4 214 aaKnown RBP20.33■□□□□ 0.85
SVOP-201ENST00000546618 LRP2BPQ9P2M1 347 aa20.33■□□□□ 0.85
SVOP-201ENST00000546618 SUGT1Q9Y2Z0 365 aa20.33■□□□□ 0.85
SVOP-201ENST00000546618 HIP1O00291 1037 aa20.32■□□□□ 0.84
SVOP-201ENST00000546618 ZFYP08048 801 aaPredicted RBP20.32■□□□□ 0.84
SVOP-201ENST00000546618 TMED8Q6PL24 325 aaPredicted RBP20.32■□□□□ 0.84
SVOP-201ENST00000546618 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
SVOP-201ENST00000546618 KCNQ5Q9NR82 932 aa20.32■□□□□ 0.84
SVOP-201ENST00000546618 ABCF2Q9UG63 623 aa20.32■□□□□ 0.84
SVOP-201ENST00000546618 FZD9O00144 591 aa20.31■□□□□ 0.84
SVOP-201ENST00000546618 IDH1O75874 414 aaKnown RBP20.31■□□□□ 0.84
SVOP-201ENST00000546618 MFSD14BQ5SR56 506 aa20.31■□□□□ 0.84
SVOP-201ENST00000546618 DACT2Q5SW24 774 aa20.31■□□□□ 0.84
SVOP-201ENST00000546618 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
SVOP-201ENST00000546618 JAG2Q9Y219 1238 aa20.31■□□□□ 0.84
SVOP-201ENST00000546618 RFX7Q2KHR2 1363 aa20.31■□□□□ 0.84
SVOP-201ENST00000546618 CDC45O75419 566 aa20.3■□□□□ 0.84
SVOP-201ENST00000546618 LDHBP07195 334 aaKnown RBP20.3■□□□□ 0.84
SVOP-201ENST00000546618 TNIP1Q15025 636 aa20.3■□□□□ 0.84
SVOP-201ENST00000546618 CASC1Q6TDU7 716 aa20.3■□□□□ 0.84
SVOP-201ENST00000546618 RAI14Q9P0K7 980 aa20.3■□□□□ 0.84
SVOP-201ENST00000546618 VIL1P09327 827 aaKnown RBP20.29■□□□□ 0.84
SVOP-201ENST00000546618 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
SVOP-201ENST00000546618 CXCL9Q07325 125 aa20.29■□□□□ 0.84
SVOP-201ENST00000546618 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
SVOP-201ENST00000546618 CIAPIN1Q6FI81 312 aa20.29■□□□□ 0.84
SVOP-201ENST00000546618 AKAP11Q9UKA4 1901 aa20.29■□□□□ 0.84
SVOP-201ENST00000546618 COL4A5P29400 1685 aa20.29■□□□□ 0.84
SVOP-201ENST00000546618 MYO3BQ8WXR4 1341 aa20.28■□□□□ 0.84
SVOP-201ENST00000546618 RNF113AO15541 343 aaKnown RBP20.28■□□□□ 0.84
SVOP-201ENST00000546618 RAD17O75943 681 aa20.28■□□□□ 0.84
SVOP-201ENST00000546618 TOMM70O94826 608 aa20.28■□□□□ 0.84
SVOP-201ENST00000546618 CHMLP26374 656 aa20.28■□□□□ 0.84
SVOP-201ENST00000546618 UBE3CQ15386 1083 aa20.28■□□□□ 0.84
SVOP-201ENST00000546618 PSMD14O00487 310 aa20.27■□□□□ 0.84
SVOP-201ENST00000546618 PRDX5P30044 214 aa20.27■□□□□ 0.84
SVOP-201ENST00000546618 ADD2P35612 726 aa20.27■□□□□ 0.84
SVOP-201ENST00000546618 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
SVOP-201ENST00000546618 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.84
SVOP-201ENST00000546618 CERS5Q8N5B7 392 aa20.27■□□□□ 0.84
SVOP-201ENST00000546618 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
SVOP-201ENST00000546618 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
SVOP-201ENST00000546618 PDE6AP16499 860 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms