RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 FOXD4L6Q3SYB3 417 aaPredicted RBP10.52□□□□□ -0.73
CPNE8-204ENST00000546603 FOXD4L3Q6VB84 417 aaPredicted RBP10.52□□□□□ -0.73
CPNE8-204ENST00000546603 SLC7A3Q8WY07 619 aa10.52□□□□□ -0.73
CPNE8-204ENST00000546603 EHD4Q9H223 541 aa10.52□□□□□ -0.73
CPNE8-204ENST00000546603 A0A096LPE4 126 aa10.51□□□□□ -0.73
CPNE8-204ENST00000546603 A0A1W2PPZ6 126 aa10.51□□□□□ -0.73
CPNE8-204ENST00000546603 K7ELQ4 463 aaPredicted RBP10.51□□□□□ -0.73
CPNE8-204ENST00000546603 EIF4EBP3O60516 100 aaPredicted RBP10.51□□□□□ -0.73
CPNE8-204ENST00000546603 C19orf57Q0VDD7 668 aa10.51□□□□□ -0.73
CPNE8-204ENST00000546603 KCNK4Q9NYG8 393 aa10.51□□□□□ -0.73
CPNE8-204ENST00000546603 METTL12A8MUP2 240 aa10.5□□□□□ -0.73
CPNE8-204ENST00000546603 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
CPNE8-204ENST00000546603 GADD45BO75293 160 aaPredicted RBP10.5□□□□□ -0.73
CPNE8-204ENST00000546603 DUOXA2Q1HG44 320 aa10.5□□□□□ -0.73
CPNE8-204ENST00000546603 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.5□□□□□ -0.73
CPNE8-204ENST00000546603 ASB16Q96NS5 453 aa10.5□□□□□ -0.73
CPNE8-204ENST00000546603 SSBP4Q9BWG4 385 aaPredicted RBP10.5□□□□□ -0.73
CPNE8-204ENST00000546603 ADAM23O75077 832 aa10.49□□□□□ -0.73
CPNE8-204ENST00000546603 ALX3O95076 343 aa10.49□□□□□ -0.73
CPNE8-204ENST00000546603 GRIA4P48058 902 aa10.49□□□□□ -0.73
CPNE8-204ENST00000546603 SOX17Q9H6I2 414 aaPredicted RBP10.49□□□□□ -0.73
CPNE8-204ENST00000546603 ESRRAP11474 423 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-204ENST00000546603 RSPO4Q2I0M5 234 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-204ENST00000546603 SPRED3Q2MJR0 410 aa10.48□□□□□ -0.73
CPNE8-204ENST00000546603 NKAPLQ5M9Q1 402 aa10.48□□□□□ -0.73
CPNE8-204ENST00000546603 ACAD11Q709F0 780 aa10.48□□□□□ -0.73
CPNE8-204ENST00000546603 TP53INP1Q96A56 240 aa10.48□□□□□ -0.73
CPNE8-204ENST00000546603 CLEC4MQ9H2X3 399 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-204ENST00000546603 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
CPNE8-204ENST00000546603 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
CPNE8-204ENST00000546603 DDX3YO15523 660 aaKnown RBP10.47□□□□□ -0.73
CPNE8-204ENST00000546603 ADAM11O75078 769 aa10.47□□□□□ -0.73
CPNE8-204ENST00000546603 WISP1O95388 367 aa10.47□□□□□ -0.73
CPNE8-204ENST00000546603 ENOX2Q16206 610 aaKnown RBP10.47□□□□□ -0.73
CPNE8-204ENST00000546603 DZIP1LQ8IYY4 767 aaKnown RBP10.47□□□□□ -0.73
CPNE8-204ENST00000546603 EPS8L3Q8TE67 593 aaKnown RBP10.47□□□□□ -0.73
CPNE8-204ENST00000546603 FOXD4L4Q8WXT5 416 aaPredicted RBP10.47□□□□□ -0.73
CPNE8-204ENST00000546603 MEGF10Q96KG7 1140 aa10.47□□□□□ -0.73
CPNE8-204ENST00000546603 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 H2AFB1P0C5Y9 115 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 NLRP12P59046 1061 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 PCDH1Q08174 1060 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 HGSNATQ68CP4 663 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 PRPF40BQ6NWY9 871 aaKnown RBP10.46□□□□□ -0.73
CPNE8-204ENST00000546603 Q6ZS46 218 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 KIAA1211Q6ZU35 1233 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 SND1Q7KZF4 910 aaKnown RBP eCLIP10.46□□□□□ -0.73
CPNE8-204ENST00000546603 AGGF1Q8N302 714 aaeCLIP10.46□□□□□ -0.73
CPNE8-204ENST00000546603 PPP4R2Q9NY27 417 aa10.46□□□□□ -0.73
CPNE8-204ENST00000546603 GLB1P16278 677 aa10.45□□□□□ -0.74
CPNE8-204ENST00000546603 ITPKAP23677 461 aa10.45□□□□□ -0.74
CPNE8-204ENST00000546603 PTPN12Q05209 780 aaKnown RBP10.45□□□□□ -0.74
CPNE8-204ENST00000546603 CEP41Q9BYV8 373 aa10.45□□□□□ -0.74
CPNE8-204ENST00000546603 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
CPNE8-204ENST00000546603 FMR1Q06787 632 aaKnown RBP eCLIP10.44□□□□□ -0.74
CPNE8-204ENST00000546603 UBASH3BQ8TF42 649 aa10.44□□□□□ -0.74
CPNE8-204ENST00000546603 TMEM238LA0A1B0GVL6 79 aa10.43□□□□□ -0.74
CPNE8-204ENST00000546603 GSTM4Q03013 218 aa10.43□□□□□ -0.74
CPNE8-204ENST00000546603 GRM2Q14416 872 aa10.43□□□□□ -0.74
CPNE8-204ENST00000546603 ZNF423Q2M1K9 1284 aa10.43□□□□□ -0.74
CPNE8-204ENST00000546603 DDX54Q8TDD1 881 aaKnown RBP10.43□□□□□ -0.74
CPNE8-204ENST00000546603 ABCB6Q9NP58 842 aa10.43□□□□□ -0.74
CPNE8-204ENST00000546603 DYRK3O43781 588 aa10.42□□□□□ -0.74
CPNE8-204ENST00000546603 MAPK8P45983 427 aa10.42□□□□□ -0.74
CPNE8-204ENST00000546603 FBF1Q8TES7 1133 aa10.42□□□□□ -0.74
CPNE8-204ENST00000546603 RNF208Q9H0X6 261 aa10.42□□□□□ -0.74
CPNE8-204ENST00000546603 ZNF576Q9H609 170 aa10.42□□□□□ -0.74
CPNE8-204ENST00000546603 ZFYVE1Q9HBF4 777 aa10.42□□□□□ -0.74
CPNE8-204ENST00000546603 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.41□□□□□ -0.74
CPNE8-204ENST00000546603 RPS26P11Q5JNZ5 115 aaPredicted RBP10.41□□□□□ -0.74
CPNE8-204ENST00000546603 ALG1LQ6GMV1 187 aa10.41□□□□□ -0.74
CPNE8-204ENST00000546603 RUSC1Q9BVN2 902 aa10.41□□□□□ -0.74
CPNE8-204ENST00000546603 MEGF11A6BM72 1044 aa10.4□□□□□ -0.74
CPNE8-204ENST00000546603 B3GALT4O96024 378 aa10.4□□□□□ -0.74
CPNE8-204ENST00000546603 ATP2B2Q01814 1243 aa10.4□□□□□ -0.74
CPNE8-204ENST00000546603 GLIS3Q8NEA6 775 aa10.4□□□□□ -0.74
CPNE8-204ENST00000546603 USP26Q9BXU7 913 aa10.4□□□□□ -0.74
CPNE8-204ENST00000546603 BCO2Q9BYV7 579 aa10.4□□□□□ -0.74
CPNE8-204ENST00000546603 CYP11A1P05108 521 aa10.39□□□□□ -0.75
CPNE8-204ENST00000546603 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
CPNE8-204ENST00000546603 ANKRD34AQ69YU3 496 aa10.39□□□□□ -0.75
CPNE8-204ENST00000546603 PI16Q6UXB8 463 aa10.39□□□□□ -0.75
CPNE8-204ENST00000546603 UBL7Q96S82 380 aaPredicted RBP10.39□□□□□ -0.75
CPNE8-204ENST00000546603 LOC100289279A0A1B0GTE1 492 aa10.38□□□□□ -0.75
CPNE8-204ENST00000546603 UVSSAQ2YD98 709 aa10.38□□□□□ -0.75
CPNE8-204ENST00000546603 DTHD1Q6ZMT9 781 aa10.38□□□□□ -0.75
CPNE8-204ENST00000546603 SART1O43290 800 aaKnown RBP10.37□□□□□ -0.75
CPNE8-204ENST00000546603 FCGRTP55899 365 aa10.37□□□□□ -0.75
CPNE8-204ENST00000546603 NUTM2GQ5VZR2 741 aa10.37□□□□□ -0.75
CPNE8-204ENST00000546603 PRR23CQ6ZRP0 262 aa10.37□□□□□ -0.75
CPNE8-204ENST00000546603 GIPC1O14908 333 aa10.36□□□□□ -0.75
CPNE8-204ENST00000546603 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
CPNE8-204ENST00000546603 HP1BP3Q5SSJ5 553 aaPredicted RBP10.36□□□□□ -0.75
CPNE8-204ENST00000546603 FDX2Q6P4F2 183 aa10.36□□□□□ -0.75
CPNE8-204ENST00000546603 NXPE4Q6UWF7 544 aa10.36□□□□□ -0.75
CPNE8-204ENST00000546603 FAM46AQ96IP4 442 aaKnown RBP10.36□□□□□ -0.75
CPNE8-204ENST00000546603 TMPRSS13Q9BYE2 586 aa10.36□□□□□ -0.75
CPNE8-204ENST00000546603 NRSN2Q9GZP1 204 aa10.36□□□□□ -0.75
CPNE8-204ENST00000546603 P4HBP07237 508 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms