RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 MYO1BO43795 1136 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 RHOXF2BP0C7M4 288 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 GBP2P32456 591 aaPredicted RBP13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 FANCCQ00597 558 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 CCDC129Q6ZRS4 1044 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 CNGA4Q8IV77 575 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 RHOXF2Q9BQY4 288 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 AKR1B15C9JRZ8 316 aaPredicted RBP13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 NOP2P46087 812 aaKnown RBP13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 ANO1Q5XXA6 986 aa13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 NAA16Q6N069 864 aaPredicted RBP13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 RGS12O14924 1447 aa13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 MBD5Q9P267 1494 aa13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 ANKRD62A6NC57 917 aa13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 LRRC59Q96AG4 307 aaKnown RBP13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 LRRC27Q9C0I9 530 aa13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 GUCA1BQ9UMX6 200 aa13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 ME3Q16798 604 aa13.9□□□□□ -0.18
NPC1L1-204ENST00000546276 DTNBO60941 627 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 ZSCAN29Q8IWY8 852 aaPredicted RBP13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 DRC1Q96MC2 740 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 ERVK-7P63135 1459 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 ATP7AQ04656 1500 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 PHACTR2O75167 634 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 CETN2P41208 172 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 GTF2A1P52655 376 aaPredicted RBP13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 TMEM132AQ24JP5 1023 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 TNNI3KQ59H18 835 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 CDC5LQ99459 802 aaKnown RBP13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 MTMR6Q9Y217 621 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 FPGT-TNNI3KV9GXZ4 949 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 GPATCH11Q8N954 259 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 CARD6Q9BX69 1037 aa13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 IFI16Q16666 785 aaKnown RBP13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 NCOA5Q9HCD5 579 aaKnown RBP13.89□□□□□ -0.19
NPC1L1-204ENST00000546276 MPHOSPH10O00566 681 aaKnown RBP13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 CYP7A1P22680 504 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 JAK2O60674 1132 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 NLRP12P59046 1061 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 TRPM2O94759 1503 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 FAM135BQ49AJ0 1406 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 SSR1P43307 286 aaKnown RBP13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 UBXN1Q04323 297 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 TCERG1LQ5VWI1 586 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 SSH3Q8TE77 659 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 EBAG9O00559 213 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 RXRAP19793 462 aa13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
NPC1L1-204ENST00000546276 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 CCDC42Q96M95 316 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 DBNDD2Q9BQY9 259 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 CRNKL1Q9BZJ0 848 aaKnown RBP13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 KRT2P35908 639 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 TUBB2AQ13885 445 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 NFATC2IPQ8NCF5 419 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 TUBB2BQ9BVA1 445 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 RASSF4Q9H2L5 321 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 KCNH3Q9ULD8 1083 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 LUC7L2Q9Y383 392 aaKnown RBP13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 RTL9Q8NET4 1388 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 ZNF202O95125 648 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 IPO4Q8TEX9 1081 aaKnown RBP13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 GSTTP1A0A1W2PQM5 241 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 ARHGAP6O43182 974 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 KRBA2Q6ZNG9 492 aa13.87□□□□□ -0.19
NPC1L1-204ENST00000546276 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 GNAT2P19087 354 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 SPECC1LQ69YQ0 1117 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 C10orf67Q8IYJ2 551 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 IGSF22Q8N9C0 903 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 CALM1P0DP23 149 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 CALM2P0DP24 149 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 CALM3P0DP25 149 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 ASIC1P78348 528 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 RILPL1Q5EBL4 403 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 IP6K1Q92551 441 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 ANKIB1Q9P2G1 1089 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 CHMP4BP1P59074 171 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 OSBPL3Q9H4L5 887 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 VAT1LQ9HCJ6 419 aa13.86□□□□□ -0.19
NPC1L1-204ENST00000546276 TTC31Q49AM3 519 aaPredicted RBP13.85□□□□□ -0.19
NPC1L1-204ENST00000546276 GIGYF2Q6Y7W6 1299 aaKnown RBP13.85□□□□□ -0.19
NPC1L1-204ENST00000546276 KLHDC4Q8TBB5 520 aa13.85□□□□□ -0.19
NPC1L1-204ENST00000546276 ZSWIM6Q9HCJ5 1215 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms