RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ARFGEF2Q9Y6D5 1785 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 A0A0D9SFI3 127 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 SASH3O75995 380 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 ZRANB2O95218 330 aaKnown RBP eCLIP9.13□□□□□ -0.95
UBR1-202ENST00000546274 IVLP07476 585 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 IFIT2P09913 472 aaKnown RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 NAIF1Q69YI7 327 aaPredicted RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 ERC1Q8IUD2 1116 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 SUGP1Q8IWZ8 645 aaKnown RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 CCDC196A0A1B0GTZ2 297 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 SLC27A2O14975 620 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 PLEKHO1Q53GL0 409 aaPredicted RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 CKAP2LQ8IYA6 745 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 KCNH5Q8NCM2 988 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 ATP6V1DQ9Y5K8 247 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 COL16A1Q07092 1604 aaPredicted RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 COL15A1P39059 1388 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 GRM8O00222 908 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 IGKV5-2P06315 115 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 MAP9Q49MG5 647 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 AMOTQ4VCS5 1084 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 CDC37L1Q7L3B6 337 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 LINS1Q8NG48 757 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 CEP89Q96ST8 783 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 VPS18Q9P253 973 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 GNL2Q13823 731 aaKnown RBP9.12□□□□□ -0.95
UBR1-202ENST00000546274 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 ARHGEF25Q86VW2 580 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 GLI3P10071 1580 aa9.12□□□□□ -0.95
UBR1-202ENST00000546274 TPM1P09493 284 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 CALRP27797 417 aaKnown RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 HSPA1LP34931 641 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 SSR1P43307 286 aaKnown RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 ZNF75DP51815 510 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 TOB2Q14106 344 aaPredicted RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 DHX8Q14562 1220 aaKnown RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 GIMAP7Q8NHV1 300 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 EXOC4Q96A65 974 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 GPATCH3Q96I76 525 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 CCDC8Q9H0W5 538 aaPredicted RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 KIF2AO00139 706 aaPredicted RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 SMC2O95347 1197 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 CORO7P57737 925 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 ZNF589Q86UQ0 364 aaPredicted RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 ALS2Q96Q42 1657 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 VPS37CA5D8V6 355 aaPredicted RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 GCP02774 474 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 LRRC8AQ8IWT6 810 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
UBR1-202ENST00000546274 ALDH8A1Q9H2A2 487 aaPredicted RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 RBM28Q9NW13 759 aaKnown RBP9.11□□□□□ -0.95
UBR1-202ENST00000546274 TBC1D8O95759 1140 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 ZKSCAN1P17029 563 aaPredicted RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 ARID4AP29374 1257 aaPredicted RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 PSME1Q06323 249 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 SNW1Q13573 536 aaKnown RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 C1orf141Q5JVX7 400 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 EPHA10Q5JZY3 1008 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 FAM173BQ6P4H8 233 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 TCEANC2Q96MN5 208 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 JPH2Q9BR39 696 aaPredicted RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 SRRTQ9BXP5 876 aaKnown RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 ZSCAN16Q9H4T2 348 aaPredicted RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
UBR1-202ENST00000546274 ELP1O95163 1332 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 KDM6AO15550 1401 aaPredicted RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 LIG3P49916 1009 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 BRINP3Q76B58 766 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 ANKRD24Q8TF21 1146 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 CBX8Q9HC52 389 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 ORC3Q9UBD5 711 aaPredicted RBP9.1□□□□□ -0.95
UBR1-202ENST00000546274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.1□□□□□ -0.957e-7■□□□□ 8.4
UBR1-202ENST00000546274 LIG1P18858 919 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 RPS6KB1P23443 525 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 ISM2Q6H9L7 571 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 HOMER1Q86YM7 354 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 BOLA2Q9H3K6 86 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 LAMB4A4D0S4 1761 aa9.1□□□□□ -0.95
UBR1-202ENST00000546274 COL18A1P39060 1754 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 H3BQF6 201 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 HIP1O00291 1037 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 PAX7P23759 505 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 TYRO3Q06418 890 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 LARP1BQ659C4 914 aaKnown RBP9.09□□□□□ -0.95
UBR1-202ENST00000546274 LRP10Q7Z4F1 713 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 TADA2BQ86TJ2 420 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 ZNF513Q8N8E2 541 aaPredicted RBP9.09□□□□□ -0.95
UBR1-202ENST00000546274 SIL1Q9H173 461 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 USP16Q9Y5T5 823 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 NEURL1BA8MQ27 555 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
UBR1-202ENST00000546274 USPL1Q5W0Q7 1092 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 FBXW10Q5XX13 1052 aa9.09□□□□□ -0.95
UBR1-202ENST00000546274 GBP6Q6ZN66 633 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms