RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
LINC00939-203ENST00000545784 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
LINC00939-203ENST00000545784 RAD17O75943 681 aa12.59□□□□□ -0.39
LINC00939-203ENST00000545784 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.39
LINC00939-203ENST00000545784 G3V3G9 751 aa12.58□□□□□ -0.39
LINC00939-203ENST00000545784 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.39
LINC00939-203ENST00000545784 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.39
LINC00939-203ENST00000545784 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.39
LINC00939-203ENST00000545784 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.39
LINC00939-203ENST00000545784 VPS37DQ86XT2 251 aa12.58□□□□□ -0.39
LINC00939-203ENST00000545784 OTUD7AQ8TE49 926 aaPredicted RBP12.58□□□□□ -0.39
LINC00939-203ENST00000545784 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.39
LINC00939-203ENST00000545784 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.39
LINC00939-203ENST00000545784 FAM205AQ6ZU69 1335 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 GOLGA6L3A6NEY3 463 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 PSMD14O00487 310 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 ARID4AP29374 1257 aaPredicted RBP12.58□□□□□ -0.4
LINC00939-203ENST00000545784 MCM4P33991 863 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 STRIP1Q5VSL9 837 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 CHD1LQ86WJ1 897 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 SALL3Q9BXA9 1300 aa12.58□□□□□ -0.4
LINC00939-203ENST00000545784 PTMSP20962 102 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
LINC00939-203ENST00000545784 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 SCARF1Q14162 830 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 DACT2Q5SW24 774 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
LINC00939-203ENST00000545784 CCDC88AQ3V6T2 1871 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 GTF2IP78347 998 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 TNIP1Q15025 636 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 CIAPIN1Q6FI81 312 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 GMLQ99445 158 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 MXD3Q9BW11 206 aa12.57□□□□□ -0.4
LINC00939-203ENST00000545784 DICER1Q9UPY3 1922 aaKnown RBP12.56□□□□□ -0.4
LINC00939-203ENST00000545784 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
LINC00939-203ENST00000545784 FSD2A1L4K1 749 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 SEMA3EO15041 775 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 DDNO94850 711 aaPredicted RBP12.56□□□□□ -0.4
LINC00939-203ENST00000545784 MCAMP43121 646 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 GPC2Q8N158 579 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 CERS5Q8N5B7 392 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 HMG20BQ9P0W2 317 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 CHD4Q14839 1912 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 SCN9AQ15858 1988 aa12.56□□□□□ -0.4
LINC00939-203ENST00000545784 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
LINC00939-203ENST00000545784 PI16Q6UXB8 463 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 DENND2AQ9ULE3 1009 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
LINC00939-203ENST00000545784 JAG2Q9Y219 1238 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 ARAP2Q8WZ64 1704 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 PDS5AQ29RF7 1337 aaKnown RBP12.55□□□□□ -0.4
LINC00939-203ENST00000545784 ATP5JP18859 108 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 FKBP1AP62942 108 aaKnown RBP12.55□□□□□ -0.4
LINC00939-203ENST00000545784 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 RSBN1LQ6PCB5 846 aaPredicted RBP12.55□□□□□ -0.4
LINC00939-203ENST00000545784 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 SNX21Q969T3 373 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
LINC00939-203ENST00000545784 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
LINC00939-203ENST00000545784 POTECB2RU33 542 aa12.54□□□□□ -0.4
LINC00939-203ENST00000545784 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
LINC00939-203ENST00000545784 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
LINC00939-203ENST00000545784 CHAF1AQ13111 956 aaPredicted RBP12.54□□□□□ -0.4
LINC00939-203ENST00000545784 GRIK5Q16478 980 aa12.54□□□□□ -0.4
LINC00939-203ENST00000545784 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
LINC00939-203ENST00000545784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC00939-203ENST00000545784 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
LINC00939-203ENST00000545784 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
LINC00939-203ENST00000545784 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
LINC00939-203ENST00000545784 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
LINC00939-203ENST00000545784 MRE11P49959 708 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 PLEKHM2Q8IWE5 1019 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 AGBL3Q8NEM8 1001 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 SNRKQ9NRH2 765 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 WDR66Q8TBY9 1149 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 PI4K2BQ8TCG2 481 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 DPF2Q92785 391 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 NDUFB9Q9Y6M9 179 aa12.53□□□□□ -0.4
LINC00939-203ENST00000545784 TTC41PQ6P2S7 1318 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 CYP2E1P05181 493 aaPredicted RBP12.52□□□□□ -0.4
LINC00939-203ENST00000545784 MX1P20591 662 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 RPS12P25398 132 aaKnown RBP12.52□□□□□ -0.4
LINC00939-203ENST00000545784 ZAP70P43403 619 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 SCNN1DP51172 638 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 PDE1AP54750 535 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 TBC1D22AQ8WUA7 517 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 FBXW7Q969H0 707 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms