RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 LRP10Q7Z4F1 713 aa4.59□□□□□ -1.67
LINC01965-204ENST00000545549 NFATC2IPQ8NCF5 419 aa4.59□□□□□ -1.67
LINC01965-204ENST00000545549 CFAP53Q96M91 514 aa4.59□□□□□ -1.67
LINC01965-204ENST00000545549 PAPPA2Q9BXP8 1791 aa4.59□□□□□ -1.67
LINC01965-204ENST00000545549 CNTNAP4Q9C0A0 1308 aa4.59□□□□□ -1.67
LINC01965-204ENST00000545549 SLC6A16Q9GZN6 736 aa4.59□□□□□ -1.67
LINC01965-204ENST00000545549 RNF186Q9NXI6 227 aa4.59□□□□□ -1.67
LINC01965-204ENST00000545549 NOP58Q9Y2X3 529 aaKnown RBP4.59□□□□□ -1.67
LINC01965-204ENST00000545549 SALL2Q9Y467 1007 aaPredicted RBP4.59□□□□□ -1.67
LINC01965-204ENST00000545549 SCN4AP35499 1836 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 ZFHX4Q86UP3 3567 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 RNF123Q5XPI4 1314 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 RNF223E7ERA6 249 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 LILRB3O75022 631 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 CYP19A1P11511 503 aaPredicted RBP4.58□□□□□ -1.68
LINC01965-204ENST00000545549 PRKAR2BP31323 418 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 EPHX2P34913 555 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 ACAP1Q15027 740 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 ERFEQ4G0M1 354 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 RETREG3Q86VR2 466 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 GAS2L2Q8NHY3 880 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 PRR7Q8TB68 274 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 TSC1Q92574 1164 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 PCMTD1Q96MG8 357 aaPredicted RBP4.58□□□□□ -1.68
LINC01965-204ENST00000545549 ZIC5Q96T25 663 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC01965-204ENST00000545549 ZBTB3Q9H5J0 574 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.58□□□□□ -1.68
LINC01965-204ENST00000545549 TMOD3Q9NYL9 352 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 HACL1Q9UJ83 578 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 LAMA3Q16787 3333 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 DLG5Q8TDM6 1919 aa4.58□□□□□ -1.68
LINC01965-204ENST00000545549 LAMA2P24043 3122 aaKnown RBP4.57□□□□□ -1.68
LINC01965-204ENST00000545549 GNAT3A8MTJ3 354 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 NFKBIEO00221 500 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 RPS6KA4O75676 772 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 NEFMP07197 916 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 ZNF853P0CG23 659 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 SSFA2P28290 1259 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 EIF5P55010 431 aaKnown RBP4.57□□□□□ -1.68
LINC01965-204ENST00000545549 NFE2L2Q16236 605 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 MSS51Q4VC12 460 aa4.57□□□□□ -1.68
LINC01965-204ENST00000545549 ZNF496Q96IT1 587 aaPredicted RBP4.57□□□□□ -1.68
LINC01965-204ENST00000545549 IPO9Q96P70 1041 aaKnown RBP4.57□□□□□ -1.68
LINC01965-204ENST00000545549 PNNQ9H307 717 aaKnown RBP4.57□□□□□ -1.68
LINC01965-204ENST00000545549 CACNA1BQ00975 2339 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 KDM3BQ7LBC6 1761 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 SOS1Q07889 1333 aaPredicted RBP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 NRXN2Q9P2S2 1712 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 CHL1O00533 1208 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 KCNQ3O43525 872 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 DXOO77932 396 aaKnown RBP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 U2AF1L5P0DN76 240 aaPredicted RBP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 JUNDP17535 347 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 TM4SF1P30408 202 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 TMPOP42166 694 aaKnown RBP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 U2AF1Q01081 240 aaKnown RBP eCLIP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 AAMPQ13685 434 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 TUSC1Q2TAM9 212 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 PLA2G2CQ5R387 149 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 ZNF790Q6PG37 636 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 MAFAQ8NHW3 353 aaPredicted RBP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 ZNF296Q8WUU4 475 aaPredicted RBP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 DPF3Q92784 378 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 GUCD1Q96NT3 240 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 LRFN3Q9BTN0 628 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 GOPCQ9HD26 462 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 BABAM1Q9NWV8 329 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 ADAMTS8Q9UP79 889 aa4.56□□□□□ -1.68
LINC01965-204ENST00000545549 FCF1Q9Y324 198 aaKnown RBP4.56□□□□□ -1.68
LINC01965-204ENST00000545549 MUC6Q6W4X9 2439 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 C4AP0C0L4 1744 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 ZNF521Q96K83 1311 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 SPDYE5A6NIY4 337 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 E9PSI1 815 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 U2SURPO15042 1029 aaKnown RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 GYS1P13807 737 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 GGCXP38435 758 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 CRKLP46109 303 aaKnown RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 MMP16P51512 607 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 CABP4P57796 275 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 SLC39A6Q13433 755 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 LRIT3Q3SXY7 679 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 C1orf141Q5JVX7 400 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 NBPF10Q6P3W6 841 aaKnown RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 CENPQQ7L2Z9 268 aaPredicted RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 NPM2Q86SE8 214 aaKnown RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 DNAJC10Q8IXB1 793 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 EMID1Q96A84 441 aaPredicted RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 SYTL4Q96C24 671 aaPredicted RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 UPF2Q9HAU5 1272 aaKnown RBP4.55□□□□□ -1.68
LINC01965-204ENST00000545549 ATRXP46100 2492 aa4.55□□□□□ -1.68
LINC01965-204ENST00000545549 USP42Q9H9J4 1324 aaKnown RBP4.54□□□□□ -1.68
LINC01965-204ENST00000545549 TRAF5O00463 557 aa4.54□□□□□ -1.68
LINC01965-204ENST00000545549 AP1G2O75843 785 aa4.54□□□□□ -1.68
LINC01965-204ENST00000545549 CHRNA5P30532 468 aa4.54□□□□□ -1.68
LINC01965-204ENST00000545549 RFC5P40937 340 aa4.54□□□□□ -1.68
LINC01965-204ENST00000545549 EIF4A1P60842 406 aaKnown RBP4.54□□□□□ -1.68
LINC01965-204ENST00000545549 KIF23Q02241 960 aaPredicted RBP4.54□□□□□ -1.68
LINC01965-204ENST00000545549 CTDSPL2Q05D32 466 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms