RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 RIPK4P57078 832 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 UBXN2AP68543 259 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
COPA-207ENST00000545284 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.9
COPA-207ENST00000545284 CCL15Q16663 113 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 NBPF12Q5TAG4 269 aaPredicted RBP9.46□□□□□ -0.9
COPA-207ENST00000545284 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 BRI3BPQ8WY22 251 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 MXD3Q9BW11 206 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 ANKRD2Q9GZV1 360 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 SRRDQ9UH36 339 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 FZD1Q9UP38 647 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 PSME4Q14997 1843 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 EVI5O60447 810 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 CETPP11597 493 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 GRK4P32298 578 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 GTF2IP78347 998 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 GOLGA2Q08379 1002 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 RASA3Q14644 834 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 LRIT3Q3SXY7 679 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
COPA-207ENST00000545284 CWC25Q9NXE8 425 aaPredicted RBP9.45□□□□□ -0.9
COPA-207ENST00000545284 SSC5DA1L4H1 1573 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 LAMB1P07942 1786 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 TAF1P21675 1872 aa9.45□□□□□ -0.9
COPA-207ENST00000545284 SOX1O00570 391 aaPredicted RBP9.44□□□□□ -0.9
COPA-207ENST00000545284 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 MTFR1Q15390 333 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.44□□□□□ -0.9
COPA-207ENST00000545284 C15orf52Q6ZUT6 534 aaKnown RBP9.44□□□□□ -0.9
COPA-207ENST00000545284 FAM43AQ8N2R8 423 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 DEFB123Q8N688 67 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 TTLL11Q8NHH1 800 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 RAET1EQ8TD07 263 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 RNF208Q9H0X6 261 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 ELP3Q9H9T3 547 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 CD209Q9NNX6 404 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 RIPOR2Q9Y4F9 1068 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 CSADQ9Y600 493 aa9.44□□□□□ -0.9
COPA-207ENST00000545284 COL4A1P02462 1669 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 FARP2O94887 1054 aaPredicted RBP9.43□□□□□ -0.9
COPA-207ENST00000545284 SGPL1O95470 568 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
COPA-207ENST00000545284 CCL5P13501 91 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 IGHMBP2P38935 993 aaKnown RBP9.43□□□□□ -0.9
COPA-207ENST00000545284 CTSWP56202 376 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 SNAPC2Q13487 334 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 CFAP100Q494V2 611 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 C17orf99Q6UX52 265 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 TXNRD3Q86VQ6 643 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 ERO1BQ86YB8 467 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 SLAIN1Q8ND83 568 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.43□□□□□ -0.9
COPA-207ENST00000545284 U2AF1L4Q8WU68 220 aaKnown RBP9.43□□□□□ -0.9
COPA-207ENST00000545284 ZNF428Q96B54 188 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 LRCH3Q96II8 777 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
COPA-207ENST00000545284 MTMR10Q9NXD2 777 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 LAMA3Q16787 3333 aa9.43□□□□□ -0.9
COPA-207ENST00000545284 SPDYE5A6NIY4 337 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 DDX58O95786 925 aaKnown RBP9.42□□□□□ -0.9
COPA-207ENST00000545284 TMPOP42166 694 aaKnown RBP9.42□□□□□ -0.9
COPA-207ENST00000545284 PSMC4P43686 418 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 TNNI2P48788 182 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 HOOK2Q96ED9 719 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 GDF15Q99988 308 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 METTL22Q9BUU2 404 aaPredicted RBP9.42□□□□□ -0.9
COPA-207ENST00000545284 ARHGAP39Q9C0H5 1083 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 VEZTQ9HBM0 779 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
COPA-207ENST00000545284 STAP2Q9UGK3 403 aa9.42□□□□□ -0.9
COPA-207ENST00000545284 ZNF646O15015 1829 aaPredicted RBP9.42□□□□□ -0.9
COPA-207ENST00000545284 CLRN2A0PK11 232 aa9.41□□□□□ -0.9
COPA-207ENST00000545284 IL1R1P14778 569 aa9.41□□□□□ -0.9
COPA-207ENST00000545284 OSBPP22059 807 aa9.41□□□□□ -0.9
COPA-207ENST00000545284 VGLL4Q14135 290 aa9.41□□□□□ -0.9
COPA-207ENST00000545284 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.41□□□□□ -0.9
COPA-207ENST00000545284 CERS5Q8N5B7 392 aa9.41□□□□□ -0.9
COPA-207ENST00000545284 MYD88Q99836 296 aa9.41□□□□□ -0.9
COPA-207ENST00000545284 SERPINA10Q9UK55 444 aa9.41□□□□□ -0.9
COPA-207ENST00000545284 FAM205AQ6ZU69 1335 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 BTBD19C9JJ37 291 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.9
COPA-207ENST00000545284 KCNJ4P48050 445 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 PPATQ06203 517 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 PPIL2Q13356 520 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 KRT24Q2M2I5 525 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 SPDYE2Q495Y8 402 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 FAM109BQ6ICB4 259 aaPredicted RBP9.4□□□□□ -0.9
COPA-207ENST00000545284 ANKRD23Q86SG2 305 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 TEPSINQ96N21 525 aa9.4□□□□□ -0.9
COPA-207ENST00000545284 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
COPA-207ENST00000545284 MPHOSPH8Q99549 860 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms