RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 OTUD7BQ6GQQ9 843 aa12.14□□□□□ -0.47
CHD4-212ENST00000545083 RUNDC1Q96C34 613 aa12.14□□□□□ -0.47
CHD4-212ENST00000545083 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
CHD4-212ENST00000545083 PRMT6Q96LA8 375 aaPredicted RBP12.14□□□□□ -0.47
CHD4-212ENST00000545083 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
CHD4-212ENST00000545083 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
CHD4-212ENST00000545083 IRS2Q9Y4H2 1338 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 CUL9Q8IWT3 2517 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
CHD4-212ENST00000545083 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 IREB2P48200 963 aaKnown RBP12.13□□□□□ -0.47
CHD4-212ENST00000545083 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 CFAP100Q494V2 611 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 BRI3BPQ8WY22 251 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 OPTNQ96CV9 577 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 ELP3Q9H9T3 547 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
CHD4-212ENST00000545083 IGHMBP2P38935 993 aaKnown RBP12.12□□□□□ -0.47
CHD4-212ENST00000545083 RASA3Q14644 834 aa12.12□□□□□ -0.47
CHD4-212ENST00000545083 CWF19L2Q2TBE0 894 aaKnown RBP12.12□□□□□ -0.47
CHD4-212ENST00000545083 SUPT20HL1Q3ZLR7 823 aa12.12□□□□□ -0.47
CHD4-212ENST00000545083 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
CHD4-212ENST00000545083 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
CHD4-212ENST00000545083 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
CHD4-212ENST00000545083 SH3TC2Q8TF17 1288 aa12.12□□□□□ -0.47
CHD4-212ENST00000545083 RBM27Q9P2N5 1060 aaKnown RBP12.12□□□□□ -0.47
CHD4-212ENST00000545083 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
CHD4-212ENST00000545083 OTOFQ9HC10 1997 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 DDX58O95786 925 aaKnown RBP12.11□□□□□ -0.47
CHD4-212ENST00000545083 ITGA6P23229 1130 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 CHRNDQ07001 517 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
CHD4-212ENST00000545083 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 FAM43AQ8N2R8 423 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 SHISA4Q96DD7 197 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
CHD4-212ENST00000545083 ZSWIM8A7E2V4 1837 aa12.1□□□□□ -0.47
CHD4-212ENST00000545083 NEURL1BA8MQ27 555 aa12.1□□□□□ -0.47
CHD4-212ENST00000545083 H7C1W4 665 aa12.1□□□□□ -0.47
CHD4-212ENST00000545083 DLL1O00548 723 aa12.1□□□□□ -0.47
CHD4-212ENST00000545083 KSR2Q6VAB6 950 aa12.1□□□□□ -0.47
CHD4-212ENST00000545083 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.1□□□□□ -0.47
CHD4-212ENST00000545083 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
CHD4-212ENST00000545083 ZFYVE28Q9HCC9 887 aa12.1□□□□□ -0.47
CHD4-212ENST00000545083 MYH3P11055 1940 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 CCL15-CCL14A0A0B4J2E2 113 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 MYO1BO43795 1136 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 TAF5LO75529 589 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 KCNJ4P48050 445 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 MTFR1Q15390 333 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 CCL15Q16663 113 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 HELBQ8NG08 1087 aaPredicted RBP12.09□□□□□ -0.47
CHD4-212ENST00000545083 TEPSINQ96N21 525 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 MPHOSPH8Q99549 860 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 PRO3102Q9H379 93 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 IFT57Q9NWB7 429 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 COL6A3P12111 3177 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 ECM29Q5VYK3 1845 aa12.09□□□□□ -0.47
CHD4-212ENST00000545083 CSF1RP07333 972 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 IL1R1P14778 569 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 CASP7P55210 303 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 VGLL4Q14135 290 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 ARHGEF6Q15052 776 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 RALBP1Q15311 655 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
CHD4-212ENST00000545083 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 PLA2G12BQ9BX93 195 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 LAMA3Q16787 3333 aa12.08□□□□□ -0.48
CHD4-212ENST00000545083 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
CHD4-212ENST00000545083 CTGFP29279 349 aa12.07□□□□□ -0.48
CHD4-212ENST00000545083 GTF2A2P52657 109 aa12.07□□□□□ -0.48
CHD4-212ENST00000545083 RBM5P52756 815 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHD4-212ENST00000545083 FKBP1AP62942 108 aaKnown RBP12.07□□□□□ -0.48
CHD4-212ENST00000545083 GNAI1P63096 354 aa12.07□□□□□ -0.48
CHD4-212ENST00000545083 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
CHD4-212ENST00000545083 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
CHD4-212ENST00000545083 G2E3Q7L622 706 aa12.07□□□□□ -0.48
CHD4-212ENST00000545083 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
CHD4-212ENST00000545083 ZNF70Q9UC06 446 aaPredicted RBP12.07□□□□□ -0.48
CHD4-212ENST00000545083 TLR2O60603 784 aa12.06□□□□□ -0.48
CHD4-212ENST00000545083 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
CHD4-212ENST00000545083 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
CHD4-212ENST00000545083 NEXNQ0ZGT2 675 aa12.06□□□□□ -0.48
CHD4-212ENST00000545083 GCKRQ14397 625 aa12.06□□□□□ -0.48
CHD4-212ENST00000545083 WDR43Q15061 677 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHD4-212ENST00000545083 UBE2Q1Q7Z7E8 422 aa12.06□□□□□ -0.48
CHD4-212ENST00000545083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHD4-212ENST00000545083 DPF3Q92784 378 aa12.06□□□□□ -0.48
CHD4-212ENST00000545083 TMEM39BQ9GZU3 492 aa12.06□□□□□ -0.48
CHD4-212ENST00000545083 TDRD3Q9H7E2 651 aaKnown RBP12.06□□□□□ -0.48
CHD4-212ENST00000545083 ZNF804AQ7Z570 1209 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms