RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SLAIN2Q9P270 581 aa15.21■□□□□ 0.03
CPSF7-223ENST00000544669 NAP1L2Q9ULW6 460 aaPredicted RBP15.21■□□□□ 0.03
CPSF7-223ENST00000544669 ERVV-1B6SEH8 477 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 PRC1O43663 620 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
CPSF7-223ENST00000544669 METTL24Q5JXM2 366 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 ZNF594Q96JF6 807 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-223ENST00000544669 TMEM87BQ96K49 555 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 BPIFA3Q9BQP9 254 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 PAXBP1Q9Y5B6 917 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 M0R2C6 588 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 NRDCO43847 1150 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 FGAP02671 866 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 LDHAL6AQ6ZMR3 332 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 FBXO18Q8NFZ0 1043 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 ZNF830Q96NB3 372 aaPredicted RBP15.2■□□□□ 0.02
CPSF7-223ENST00000544669 LRRC2Q9BYS8 371 aa15.2■□□□□ 0.02
CPSF7-223ENST00000544669 ZMYM6O95789 1325 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 TJP1Q07157 1748 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 GSDMDP57764 484 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 RBM6P78332 1123 aaKnown RBP15.19■□□□□ 0.02
CPSF7-223ENST00000544669 COL9A3Q14050 684 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-223ENST00000544669 STK38Q15208 465 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
CPSF7-223ENST00000544669 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 USP28Q96RU2 1077 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 SDF4Q9BRK5 362 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 MTA3Q9BTC8 594 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 PUS3Q9BZE2 481 aaKnown RBP15.19■□□□□ 0.02
CPSF7-223ENST00000544669 DNAJC25Q9H1X3 360 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 CLIP2Q9UDT6 1046 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
CPSF7-223ENST00000544669 RIPOR2Q9Y4F9 1068 aa15.19■□□□□ 0.02
CPSF7-223ENST00000544669 ATRNO75882 1429 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 TUBB4AP04350 444 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 SYCP1Q15431 976 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 ALX1Q15699 326 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 CCDC186Q7Z3E2 898 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 FSIP1Q8NA03 581 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 TIGD1Q96MW7 591 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 NOL10Q9BSC4 688 aaKnown RBP15.18■□□□□ 0.02
CPSF7-223ENST00000544669 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 IMPACTQ9P2X3 320 aa15.18■□□□□ 0.02
CPSF7-223ENST00000544669 ORC3Q9UBD5 711 aaPredicted RBP15.18■□□□□ 0.02
CPSF7-223ENST00000544669 KLF18A0A0U1RQI7 1052 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 SMTNL1A8MU46 457 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 KIF2AO00139 706 aaPredicted RBP15.17■□□□□ 0.02
CPSF7-223ENST00000544669 GPAA1O43292 621 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 AP5Z1O43299 807 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 MYO1BO43795 1136 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 PDE8AO60658 829 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 ADD2P35612 726 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 SNW1Q13573 536 aaKnown RBP15.17■□□□□ 0.02
CPSF7-223ENST00000544669 IQCB1Q15051 598 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 LINC00301Q8NCQ3 95 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 WASF1Q92558 559 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 CTSWP56202 376 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 TTLL11Q8NHH1 800 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 CNNM2Q9H8M5 875 aa15.17■□□□□ 0.02
CPSF7-223ENST00000544669 ANGEL1Q9UNK9 670 aaKnown RBP15.17■□□□□ 0.02
CPSF7-223ENST00000544669 SPTLC2O15270 562 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 PDE8BO95263 885 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 GNAT2P19087 354 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 ITGA6P23229 1130 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 ZAP70P43403 619 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 NLRP10Q86W26 655 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 FMR1NBQ8N0W7 255 aaPredicted RBP15.16■□□□□ 0.02
CPSF7-223ENST00000544669 KCNF1Q9H3M0 494 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
CPSF7-223ENST00000544669 FDPSP14324 419 aaKnown RBP15.15■□□□□ 0.02
CPSF7-223ENST00000544669 PTGS1P23219 599 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 CMA1P23946 247 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
CPSF7-223ENST00000544669 TRIM29Q14134 588 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 LPIN2Q92539 896 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 FAM89AQ96GI7 184 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 PCDHA7Q9UN72 937 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 PPP6R2O75170 966 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 ARID4AP29374 1257 aaPredicted RBP15.15■□□□□ 0.02
CPSF7-223ENST00000544669 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
CPSF7-223ENST00000544669 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
CPSF7-223ENST00000544669 SLC9C2Q5TAH2 1124 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 MYSM1Q5VVJ2 828 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 DNAJC10Q8IXB1 793 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 TMTC2Q8N394 836 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 NCOA5Q9HCD5 579 aaKnown RBP15.15■□□□□ 0.02
CPSF7-223ENST00000544669 STRN4Q9NRL3 753 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 KCND1Q9NSA2 647 aa15.15■□□□□ 0.02
CPSF7-223ENST00000544669 HOOK1Q9UJC3 728 aaKnown RBP15.15■□□□□ 0.02
CPSF7-223ENST00000544669 ADORA1P30542 326 aa15.14■□□□□ 0.01
CPSF7-223ENST00000544669 MAP3K12Q12852 859 aa15.14■□□□□ 0.01
CPSF7-223ENST00000544669 ANO1Q5XXA6 986 aa15.14■□□□□ 0.01
CPSF7-223ENST00000544669 TTLL5Q6EMB2 1281 aa15.14■□□□□ 0.01
CPSF7-223ENST00000544669 ELOA2Q8IYF1 753 aaPredicted RBP15.14■□□□□ 0.01
CPSF7-223ENST00000544669 PIGBQ92521 554 aa15.14■□□□□ 0.01
CPSF7-223ENST00000544669 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms