RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 CRHR2Q13324 411 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 NBPF12Q5TAG4 269 aaPredicted RBP12.25□□□□□ -0.45
C2CD3-220ENST00000544293 INTS3Q68E01 1043 aaKnown RBP12.25□□□□□ -0.45
C2CD3-220ENST00000544293 APOBEC3FQ8IUX4 373 aaKnown RBP12.25□□□□□ -0.45
C2CD3-220ENST00000544293 CD99L2Q8TCZ2 262 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 GCC1Q96CN9 775 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 PLA2G12BQ9BX93 195 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 ZBTB48P10074 688 aaPredicted RBP12.24□□□□□ -0.45
C2CD3-220ENST00000544293 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
C2CD3-220ENST00000544293 MYBBP1AQ9BQG0 1328 aaKnown RBP12.24□□□□□ -0.45
C2CD3-220ENST00000544293 AKAP11Q9UKA4 1901 aa12.24□□□□□ -0.45
C2CD3-220ENST00000544293 BRCA2P51587 3418 aa12.24□□□□□ -0.45
C2CD3-220ENST00000544293 ITGA6P23229 1130 aa12.23□□□□□ -0.45
C2CD3-220ENST00000544293 CHRNDQ07001 517 aa12.23□□□□□ -0.45
C2CD3-220ENST00000544293 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
C2CD3-220ENST00000544293 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
C2CD3-220ENST00000544293 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
C2CD3-220ENST00000544293 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
C2CD3-220ENST00000544293 TAF5LO75529 589 aa12.22□□□□□ -0.45
C2CD3-220ENST00000544293 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
C2CD3-220ENST00000544293 GNAI1P63096 354 aa12.22□□□□□ -0.45
C2CD3-220ENST00000544293 CCDC30Q5VVM6 783 aa12.22□□□□□ -0.45
C2CD3-220ENST00000544293 C15orf52Q6ZUT6 534 aaKnown RBP12.22□□□□□ -0.45
C2CD3-220ENST00000544293 UBE3BQ7Z3V4 1068 aa12.22□□□□□ -0.45
C2CD3-220ENST00000544293 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
C2CD3-220ENST00000544293 UNCXA6NJT0 531 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 DDX58O95786 925 aaKnown RBP12.21□□□□□ -0.45
C2CD3-220ENST00000544293 IL1R1P14778 569 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 GCKRQ14397 625 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 DLGAP5Q15398 846 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 CFAP100Q494V2 611 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 HELBQ8NG08 1087 aaPredicted RBP12.21□□□□□ -0.45
C2CD3-220ENST00000544293 ZNF333Q96JL9 665 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 TEPSINQ96N21 525 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 ANKRD2Q9GZV1 360 aa12.21□□□□□ -0.45
C2CD3-220ENST00000544293 KIAA0100Q14667 2235 aaKnown RBP12.21□□□□□ -0.46
C2CD3-220ENST00000544293 ZNF646O15015 1829 aaPredicted RBP12.21□□□□□ -0.46
C2CD3-220ENST00000544293 F8W031 263 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-220ENST00000544293 PPP1R12BO60237 982 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-220ENST00000544293 IGHMBP2P38935 993 aaKnown RBP12.2□□□□□ -0.46
C2CD3-220ENST00000544293 SP3Q02447 781 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 DDX10Q13206 875 aaKnown RBP12.2□□□□□ -0.46
C2CD3-220ENST00000544293 RASA3Q14644 834 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-220ENST00000544293 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 ERO1AQ96HE7 468 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 JAG2Q9Y219 1238 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 CENPFP49454 3210 aa12.2□□□□□ -0.46
C2CD3-220ENST00000544293 FKBP1AP62942 108 aaKnown RBP12.19□□□□□ -0.46
C2CD3-220ENST00000544293 FOXO4P98177 505 aa12.19□□□□□ -0.46
C2CD3-220ENST00000544293 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
C2CD3-220ENST00000544293 TSR2Q969E8 191 aaKnown RBP12.19□□□□□ -0.46
C2CD3-220ENST00000544293 PSME4Q14997 1843 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 EPHA10Q5JZY3 1008 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 FAM43AQ8N2R8 423 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 OPTNQ96CV9 577 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 ELP3Q9H9T3 547 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
C2CD3-220ENST00000544293 PTCH2Q9Y6C5 1203 aa12.18□□□□□ -0.46
C2CD3-220ENST00000544293 COL1A1P02452 1464 aaPredicted RBP12.17□□□□□ -0.46
C2CD3-220ENST00000544293 GRIK5Q16478 980 aa12.17□□□□□ -0.46
C2CD3-220ENST00000544293 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
C2CD3-220ENST00000544293 ARHGAP39Q9C0H5 1083 aa12.17□□□□□ -0.46
C2CD3-220ENST00000544293 VEZTQ9HBM0 779 aa12.17□□□□□ -0.46
C2CD3-220ENST00000544293 ZNF70Q9UC06 446 aaPredicted RBP12.17□□□□□ -0.46
C2CD3-220ENST00000544293 H0YGN5 161 aa12.16□□□□□ -0.46
C2CD3-220ENST00000544293 CTGFP29279 349 aa12.16□□□□□ -0.46
C2CD3-220ENST00000544293 IREB2P48200 963 aaKnown RBP12.16□□□□□ -0.46
C2CD3-220ENST00000544293 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
C2CD3-220ENST00000544293 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
C2CD3-220ENST00000544293 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
C2CD3-220ENST00000544293 OTUD7BQ6GQQ9 843 aa12.15□□□□□ -0.46
C2CD3-220ENST00000544293 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.15□□□□□ -0.46
C2CD3-220ENST00000544293 TDRD7Q8NHU6 1098 aaKnown RBP12.15□□□□□ -0.46
C2CD3-220ENST00000544293 ZNF594Q96JF6 807 aaPredicted RBP12.15□□□□□ -0.46
C2CD3-220ENST00000544293 TDRD3Q9H7E2 651 aaKnown RBP12.15□□□□□ -0.46
C2CD3-220ENST00000544293 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.46
C2CD3-220ENST00000544293 FAM205AQ6ZU69 1335 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 ANKRD18BA2A2Z9 1011 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 MYCP01106 439 aaPredicted RBP12.14□□□□□ -0.47
C2CD3-220ENST00000544293 KCNJ4P48050 445 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 CALD1Q05682 793 aaKnown RBP12.14□□□□□ -0.47
C2CD3-220ENST00000544293 FLIIQ13045 1269 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 VGLL4Q14135 290 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 TWISTNBQ3B726 338 aaPredicted RBP12.14□□□□□ -0.47
C2CD3-220ENST00000544293 LINS1Q8NG48 757 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 DNAAF4Q8WXU2 420 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 FAM84BQ96KN1 310 aaPredicted RBP12.14□□□□□ -0.47
C2CD3-220ENST00000544293 TMEM106CQ9BVX2 250 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 TMEM39BQ9GZU3 492 aa12.14□□□□□ -0.47
C2CD3-220ENST00000544293 CCL15-CCL14A0A0B4J2E2 113 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms