RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PPP1R12CQ9BZL4 782 aa17.42■□□□□ 0.38
CHD4-210ENST00000544040 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
CHD4-210ENST00000544040 PCK1P35558 622 aa17.42■□□□□ 0.38
CHD4-210ENST00000544040 VTI1AQ96AJ9 217 aa17.42■□□□□ 0.38
CHD4-210ENST00000544040 GSTO1P78417 241 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 AFAP1L1Q8TED9 768 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 CNNM2Q9H8M5 875 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 TNNI2P48788 182 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 AK2P54819 239 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 CALCOCO2Q13137 446 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 MAK16Q9BXY0 300 aaKnown RBP17.41■□□□□ 0.38
CHD4-210ENST00000544040 DAPK1P53355 1430 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 BICDL2A1A5D9 508 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 GEN1Q17RS7 908 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 ERCC3P19447 782 aa17.41■□□□□ 0.38
CHD4-210ENST00000544040 HSPA1LP34931 641 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 BAG1Q99933 345 aaPredicted RBP17.4■□□□□ 0.38
CHD4-210ENST00000544040 MKRN1Q9UHC7 482 aaKnown RBP17.4■□□□□ 0.38
CHD4-210ENST00000544040 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 TTC36A6NLP5 189 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 ZFYP08048 801 aaPredicted RBP17.4■□□□□ 0.38
CHD4-210ENST00000544040 SNX16P57768 344 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 SLC9C2Q5TAH2 1124 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 SEL1L2Q5TEA6 688 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 CEP120Q8N960 986 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 NKIRAS1Q9NYS0 192 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 DHX29Q7Z478 1369 aaKnown RBP17.4■□□□□ 0.38
CHD4-210ENST00000544040 FBLN1P23142 703 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 LUC7L2Q9Y383 392 aaKnown RBP17.4■□□□□ 0.38
CHD4-210ENST00000544040 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 BUB1BO60566 1050 aaPredicted RBP17.4■□□□□ 0.38
CHD4-210ENST00000544040 KRT5P13647 590 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 PSMD6Q15008 389 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 PFDN4Q9NQP4 134 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
CHD4-210ENST00000544040 FOXO3O43524 673 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
CHD4-210ENST00000544040 ALDH3A1P30838 453 aa17.39■□□□□ 0.38
CHD4-210ENST00000544040 GPIHBP1Q8IV16 184 aa17.39■□□□□ 0.38
CHD4-210ENST00000544040 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.38
CHD4-210ENST00000544040 EPSTI1Q96J88 318 aa17.39■□□□□ 0.38
CHD4-210ENST00000544040 MPHOSPH6Q99547 160 aaKnown RBP17.39■□□□□ 0.38
CHD4-210ENST00000544040 UTP14CQ5TAP6 766 aaKnown RBP17.39■□□□□ 0.37
CHD4-210ENST00000544040 TMTC2Q8N394 836 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 ARFGAP2Q8N6H7 521 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 CRCPO75575 148 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 SP4Q02446 784 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 NEDD9Q14511 834 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 GKAP1Q5VSY0 366 aaPredicted RBP17.39■□□□□ 0.37
CHD4-210ENST00000544040 TSGA10Q9BZW7 698 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 GMNNO75496 209 aa17.39■□□□□ 0.37
CHD4-210ENST00000544040 CPSF2Q9P2I0 782 aaKnown RBP17.39■□□□□ 0.37
CHD4-210ENST00000544040 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
CHD4-210ENST00000544040 AKR1B15C9JRZ8 316 aaPredicted RBP17.38■□□□□ 0.37
CHD4-210ENST00000544040 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
CHD4-210ENST00000544040 KRT9P35527 623 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 FEZ2Q9UHY8 353 aaPredicted RBP17.38■□□□□ 0.37
CHD4-210ENST00000544040 A0A1B0GVL5 298 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 CCDC152Q4G0S7 254 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 TUBB4AP04350 444 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 CLNS1AP54105 237 aaKnown RBP17.38■□□□□ 0.37
CHD4-210ENST00000544040 ANKRD13DQ6ZTN6 518 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 MIGA1Q8NAN2 632 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 MTUS1Q9ULD2 1270 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 ZNF131P52739 623 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 AGTPBP1Q9UPW5 1226 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 KIF3CO14782 793 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 LONRF3Q496Y0 759 aa17.38■□□□□ 0.37
CHD4-210ENST00000544040 NAA16Q6N069 864 aaPredicted RBP17.38■□□□□ 0.37
CHD4-210ENST00000544040 ATP2B3Q16720 1220 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
CHD4-210ENST00000544040 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
CHD4-210ENST00000544040 TRIM31Q9BZY9 425 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 MAGEB6P1A0A0J9YX57 407 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 INF2Q27J81 1249 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 VPS52Q8N1B4 723 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 EXOC5O00471 708 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 PKD2L1Q9P0L9 805 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 C17orf53Q8N3J3 647 aaPredicted RBP17.37■□□□□ 0.37
CHD4-210ENST00000544040 CCDC110Q8TBZ0 833 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 KIAA1524Q8TCG1 905 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 PAG1Q9NWQ8 432 aa17.37■□□□□ 0.37
CHD4-210ENST00000544040 FAM170AA1A519 330 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 SPDYE3A6NKU9 549 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 CCT6BQ92526 530 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 NDUFAB1O14561 156 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 RFC4P35249 363 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 NBPF6Q5VWK0 638 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 NBPF5PQ86XG9 351 aaPredicted RBP17.36■□□□□ 0.37
CHD4-210ENST00000544040 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 ARHGEF2Q92974 986 aaKnown RBP17.36■□□□□ 0.37
CHD4-210ENST00000544040 NBPF4Q96M43 638 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms