RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 A0A0G2JS52 829 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 PRC1O43663 620 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 UQCRFS1P1P0C7P4 283 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 PUM3Q15397 648 aaKnown RBP20.9■□□□□ 0.94
PTPN6-222ENST00000543744 DDB1Q16531 1140 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 RALYLQ86SE5 291 aaKnown RBP20.9■□□□□ 0.94
PTPN6-222ENST00000543744 MB21D2Q8IYB1 491 aaPredicted RBP20.9■□□□□ 0.94
PTPN6-222ENST00000543744 CCDC87Q9NVE4 849 aa20.9■□□□□ 0.94
PTPN6-222ENST00000543744 OFD1O75665 1012 aa20.89■□□□□ 0.93
PTPN6-222ENST00000543744 LPIN2Q92539 896 aa20.89■□□□□ 0.93
PTPN6-222ENST00000543744 PIH1D3Q9NQM4 214 aaKnown RBP20.89■□□□□ 0.93
PTPN6-222ENST00000543744 GPHNQ9NQX3 736 aaPredicted RBP20.89■□□□□ 0.93
PTPN6-222ENST00000543744 NWD2Q9ULI1 1742 aa20.89■□□□□ 0.93
PTPN6-222ENST00000543744 IDH1O75874 414 aaKnown RBP20.88■□□□□ 0.93
PTPN6-222ENST00000543744 ARID4AP29374 1257 aaPredicted RBP20.88■□□□□ 0.93
PTPN6-222ENST00000543744 PHKA1P46020 1223 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 UBE3CQ15386 1083 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 INTS5Q6P9B9 1019 aaKnown RBP20.88■□□□□ 0.93
PTPN6-222ENST00000543744 CLSTN2Q9H4D0 955 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 DOT1LQ8TEK3 1739 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 ADD1P35611 737 aaKnown RBP20.88■□□□□ 0.93
PTPN6-222ENST00000543744 ATP6V1AP38606 617 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 SUSD4Q5VX71 490 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 THRAP3Q9Y2W1 955 aaKnown RBP20.88■□□□□ 0.93
PTPN6-222ENST00000543744 SPATA31A1Q5TZJ5 1347 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 WNK3Q9BYP7 1800 aa20.88■□□□□ 0.93
PTPN6-222ENST00000543744 DHX16O60231 1041 aaKnown RBP20.87■□□□□ 0.93
PTPN6-222ENST00000543744 ATRNO75882 1429 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 ADAMTS2O95450 1211 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 TYRO3Q06418 890 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 ATL3Q6DD88 541 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.87■□□□□ 0.93
PTPN6-222ENST00000543744 CARMIL3Q8ND23 1372 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 AKAP11Q9UKA4 1901 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 KLF18A0A0U1RQI7 1052 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 PPFIA3O75145 1194 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 NR1I2O75469 434 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 FGFR2P21802 821 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 CEBPZQ03701 1054 aaKnown RBP20.87■□□□□ 0.93
PTPN6-222ENST00000543744 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
PTPN6-222ENST00000543744 HELBQ8NG08 1087 aaPredicted RBP20.87■□□□□ 0.93
PTPN6-222ENST00000543744 ZNF396Q96N95 335 aaPredicted RBP20.87■□□□□ 0.93
PTPN6-222ENST00000543744 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
PTPN6-222ENST00000543744 MYH7P12883 1935 aa20.86■□□□□ 0.93
PTPN6-222ENST00000543744 WDR19Q8NEZ3 1342 aa20.86■□□□□ 0.93
PTPN6-222ENST00000543744 ZNF532Q9HCE3 1301 aa20.86■□□□□ 0.93
PTPN6-222ENST00000543744 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
PTPN6-222ENST00000543744 TRDNQ13061 729 aa20.86■□□□□ 0.93
PTPN6-222ENST00000543744 FAM200AQ8TCP9 573 aa20.86■□□□□ 0.93
PTPN6-222ENST00000543744 ACSBG1Q96GR2 724 aa20.86■□□□□ 0.93
PTPN6-222ENST00000543744 RCOR1Q9UKL0 485 aa20.86■□□□□ 0.93
PTPN6-222ENST00000543744 FAM177BA6PVY3 158 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 GOLGA8BA8MQT2 603 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 SLC5A1P13866 664 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 FDPSP14324 419 aaKnown RBP20.85■□□□□ 0.93
PTPN6-222ENST00000543744 PDE6AP16499 860 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 ANTXR2P58335 489 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 PLCB2Q00722 1185 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 RBM43Q6ZSC3 357 aaKnown RBP20.85■□□□□ 0.93
PTPN6-222ENST00000543744 MPHOSPH8Q99549 860 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 MRVI1Q9Y6F6 885 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.85■□□□□ 0.93
PTPN6-222ENST00000543744 APPP05067 770 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 GUCY1B3Q02153 619 aa20.85■□□□□ 0.93
PTPN6-222ENST00000543744 LRP5O75197 1615 aa20.84■□□□□ 0.93
PTPN6-222ENST00000543744 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
PTPN6-222ENST00000543744 SIK1P57059 783 aa20.84■□□□□ 0.93
PTPN6-222ENST00000543744 PARP10Q53GL7 1025 aa20.84■□□□□ 0.93
PTPN6-222ENST00000543744 HPS5Q9UPZ3 1129 aa20.84■□□□□ 0.93
PTPN6-222ENST00000543744 SLIT2O94813 1529 aa20.84■□□□□ 0.93
PTPN6-222ENST00000543744 SPATA5Q8NB90 893 aa20.83■□□□□ 0.93
PTPN6-222ENST00000543744 USP28Q96RU2 1077 aa20.83■□□□□ 0.93
PTPN6-222ENST00000543744 WWC3Q9ULE0 1092 aa20.83■□□□□ 0.93
PTPN6-222ENST00000543744 MARCH10Q8NA82 808 aaPredicted RBP20.83■□□□□ 0.92
PTPN6-222ENST00000543744 NBPF3Q9H094 633 aa20.83■□□□□ 0.92
PTPN6-222ENST00000543744 TCRBV5S4A2TA0A5A2 114 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 CPLX1O14810 134 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 CAMTA2O94983 1202 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 SASS6Q6UVJ0 657 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 AIDAQ96BJ3 306 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 FTOQ9C0B1 505 aaKnown RBP eCLIP20.82■□□□□ 0.92
PTPN6-222ENST00000543744 CCDC152Q4G0S7 254 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 ANO6Q4KMQ2 910 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
PTPN6-222ENST00000543744 KIAA2012Q0VF49 1180 aa20.81■□□□□ 0.92
PTPN6-222ENST00000543744 ITPK1Q13572 414 aa20.81■□□□□ 0.92
PTPN6-222ENST00000543744 ILDR1Q86SU0 546 aaPredicted RBP20.81■□□□□ 0.92
PTPN6-222ENST00000543744 TBC1D10CQ8IV04 446 aa20.81■□□□□ 0.92
PTPN6-222ENST00000543744 CCAR1Q8IX12 1150 aaKnown RBP20.81■□□□□ 0.92
PTPN6-222ENST00000543744 MPNDQ8N594 471 aa20.81■□□□□ 0.92
PTPN6-222ENST00000543744 C8orf76Q96K31 380 aa20.81■□□□□ 0.92
PTPN6-222ENST00000543744 STRBPQ96SI9 672 aaKnown RBP20.81■□□□□ 0.92
PTPN6-222ENST00000543744 ORC3Q9UBD5 711 aaPredicted RBP20.81■□□□□ 0.92
PTPN6-222ENST00000543744 AP5Z1O43299 807 aa20.8■□□□□ 0.92
PTPN6-222ENST00000543744 MAP3K12Q12852 859 aa20.8■□□□□ 0.92
PTPN6-222ENST00000543744 ANGEL1Q9UNK9 670 aaKnown RBP20.8■□□□□ 0.92
PTPN6-222ENST00000543744 NIP7Q9Y221 180 aaKnown RBP eCLIP20.8■□□□□ 0.92
PTPN6-222ENST00000543744 IGHMBP2P38935 993 aaKnown RBP20.8■□□□□ 0.92
PTPN6-222ENST00000543744 RASGRF1Q13972 1273 aa20.8■□□□□ 0.92
PTPN6-222ENST00000543744 RAB11FIP4Q86YS3 637 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms