RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	CCDC83	Q8IWF9	413 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	ZNF594	Q96JF6	807 aa	Predicted RBP	13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	DSCC1	Q9BVC3	393 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	ATP6V1D	Q9Y5K8	247 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	KIAA1551	Q9HCM1	1747 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	RIC1	Q4ADV7	1423 aa		13.39	□□□□□ -0.27
LDHA-222	ENST00000543695	TOMM70	O94826	608 aa		13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	IFIT1	P09914	478 aa	Known RBP	13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	SYT1	P21579	422 aa		13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	ME3	Q16798	604 aa		13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	DDX46	Q7L014	1031 aa	Known RBP	13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	NLRP10	Q86W26	655 aa		13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	CCDC24	Q8N4L8	307 aa		13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	SYAP1	Q96A49	352 aa	Predicted RBP	13.38	□□□□□ -0.27
LDHA-222	ENST00000543695	PANK2	Q9BZ23	570 aa		13.38	□□□□□ -0.27
LDHA-222	ENST00000543695		A0A1B0GUL6	1792 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	GOLIM4	O00461	696 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	RGL2	O15211	777 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	F13A1	P00488	732 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	HSPA6	P17066	643 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	LMNB1	P20700	586 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	GJB2	P29033	226 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	TIMM10	P62072	90 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	ST3GAL1	Q11201	340 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	IFIT5	Q13325	482 aa	Known RBP	13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	CCDC158	Q5M9N0	1113 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	TPTE2	Q6XPS3	522 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	PUS3	Q9BZE2	481 aa	Known RBP	13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	NMRK2	Q9NPI5	230 aa		13.37	□□□□□ -0.27
LDHA-222	ENST00000543695	RNF113A	O15541	343 aa	Known RBP	13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	TOB2	Q14106	344 aa	Predicted RBP	13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	HLF	Q16534	295 aa		13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	CSPP1	Q1MSJ5	1256 aa		13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	TAF7L	Q5H9L4	462 aa		13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	CNKSR1	Q969H4	720 aa		13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	NEK1	Q96PY6	1258 aa		13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	TPCN1	Q9ULQ1	816 aa		13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
LDHA-222	ENST00000543695	PDE8A	O60658	829 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	ZFY	P08048	801 aa	Predicted RBP	13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	HMGB1	P09429	215 aa	Known RBP	13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	PDC	P20941	246 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	CTSW	P56202	376 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	RASSF7	Q02833	373 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	TTC39A	Q5SRH9	613 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	LRSAM1	Q6UWE0	723 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	CCDC129	Q6ZRS4	1044 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	FAM89A	Q96GI7	184 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	LARP6	Q9BRS8	491 aa	Known RBP	13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	MTMR6	Q9Y217	621 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	NDUFB9	Q9Y6M9	179 aa		13.35	□□□□□ -0.27
LDHA-222	ENST00000543695	ANKRD18B	A2A2Z9	1011 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	C21orf2	O43822	256 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	SRGN	P10124	158 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	GTF2E1	P29083	439 aa	Predicted RBP	13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	STYK1	Q6J9G0	422 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	USP48	Q86UV5	1035 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	ZNF34	Q8IZ26	560 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	TTLL11	Q8NHH1	800 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	XAGE2	Q96GT9	111 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	MASTL	Q96GX5	879 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	CHAMP1	Q96JM3	812 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	SEC62	Q99442	399 aa	Known RBP	13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	TMEM63C	Q9P1W3	806 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	RBM27	Q9P2N5	1060 aa	Known RBP	13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	MAST3	O60307	1309 aa		13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.34	□□□□□ -0.27
LDHA-222	ENST00000543695	IRS4	O14654	1257 aa	Predicted RBP	13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	CYP21A2	P08686	494 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	NASP	P49321	788 aa	Predicted RBP	13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	CCDC173	Q0VFZ6	552 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	ATP2B3	Q16720	1220 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	GORAB	Q5T7V8	394 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	SOGA3	Q5TF21	947 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	PPP1R9B	Q96SB3	815 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	RRAGC	Q9HB90	399 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	RIPOR2	Q9Y4F9	1068 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	TAF6L	Q9Y6J9	622 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	NRXN2	Q9P2S2	1712 aa		13.33	□□□□□ -0.28
LDHA-222	ENST00000543695	BRCA1	P38398	1863 aa	Known RBP	13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	SCN7A	Q01118	1682 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	FAM177B	A6PVY3	158 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	NFKBIE	O00221	500 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	ITGA6	P23229	1130 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	GPT	P24298	496 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	ADORA1	P30542	326 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	DPY19L2	Q6NUT2	758 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	NECAB1	Q8N987	351 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	RBM46	Q8TBY0	533 aa	Known RBP	13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	ANP32B	Q92688	251 aa	Known RBP	13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	GTF3C6	Q969F1	213 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	CNPY2	Q9Y2B0	182 aa		13.32	□□□□□ -0.28
LDHA-222	ENST00000543695	ARFGEF1	Q9Y6D6	1849 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms