RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 MPNDQ8N594 471 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 KRI1Q8N9T8 703 aaKnown RBP6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 GAS2L2Q8NHY3 880 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 DCPSQ96C86 337 aaKnown RBP6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 CDCA5Q96FF9 252 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 PRKD2Q9BZL6 878 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 R3HDMLQ9H3Y0 253 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 ABCC4O15439 1325 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 ASTN2O75129 1339 aaPredicted RBP6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 PITPNM2Q9BZ72 1349 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 IBTKQ9P2D0 1353 aaPredicted RBP6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 PSMD14O00487 310 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 SEMA3EO15041 775 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 DIAPH1O60610 1272 aaKnown RBP6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 FKTNO75072 461 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 BBOX1O75936 387 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 NTSR2O95665 410 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 GPTP24298 496 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 PPP4CP60510 307 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 FKBP1BP68106 108 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 RBM26Q5T8P6 1007 aaKnown RBP6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 INTS3Q68E01 1043 aaKnown RBP6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 ZNF34Q8IZ26 560 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 SLC17A8Q8NDX2 589 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 CFHR5Q9BXR6 569 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 TMX4Q9H1E5 349 aaPredicted RBP6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 MAP3K15Q6ZN16 1313 aa6.48□□□□□ -1.37
NPIPB4-219ENST00000543660 EN2P19622 333 aaPredicted RBP6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 RPS12P25398 132 aaKnown RBP6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 TJAP1Q5JTD0 557 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 SLC10A5Q5PT55 438 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 TTLL7Q6ZT98 887 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 MOB2Q70IA6 237 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 PACS2Q86VP3 889 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 SULF1Q8IWU6 871 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 NGEFQ8N5V2 710 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 PHACTR3Q96KR7 559 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 NLRP3Q96P20 1036 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 KCNQ5Q9NR82 932 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 GGA3Q9NZ52 723 aa6.47□□□□□ -1.37
NPIPB4-219ENST00000543660 RTL9Q8NET4 1388 aa6.46□□□□□ -1.37
NPIPB4-219ENST00000543660 NUP98P52948 1817 aa6.46□□□□□ -1.37
NPIPB4-219ENST00000543660 A6NJR5 290 aa6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 PATL2C9JE40 543 aaKnown RBP6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 KIF4BQ2VIQ3 1234 aa6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 OTOP1Q7RTM1 612 aa6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 CCDC97Q96F63 343 aaPredicted RBP6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 DDRGK1Q96HY6 314 aa6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 DBNDD1Q9H9R9 158 aa6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 DUOX1Q9NRD9 1551 aa6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 KNSTRNQ9Y448 316 aa6.46□□□□□ -1.38
NPIPB4-219ENST00000543660 PAPPA2Q9BXP8 1791 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 H0YGN5 161 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 UBE2Q2LH0YL09 131 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 VIL1P09327 827 aaKnown RBP6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 WASHC4Q2M389 1173 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 ANGEL2Q5VTE6 544 aaKnown RBP6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 GIGYF2Q6Y7W6 1299 aaKnown RBP6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 MCM10Q7L590 875 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 PPP1R42Q7Z4L9 355 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 GPIHBP1Q8IV16 184 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 ARMC5Q96C12 935 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 ZBTB3Q9H5J0 574 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 TRIM17Q9Y577 477 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 VCANP13611 3396 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 UNC80Q8N2C7 3258 aa6.45□□□□□ -1.38
NPIPB4-219ENST00000543660 RBBP6Q7Z6E9 1792 aaKnown RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 U2SURPO15042 1029 aaKnown RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 ZNF280AP59817 542 aaPredicted RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 GRAPQ13588 217 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 SCARF1Q14162 830 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 PARP10Q53GL7 1025 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 ZNF787Q6DD87 383 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 KIF6Q6ZMV9 814 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 RGS22Q8NE09 1264 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 GRAPLQ8TC17 118 aaPredicted RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 UTP14AQ9BVJ6 771 aaKnown RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 IL21Q9HBE4 155 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 POLLQ9UGP5 575 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 SCAF8Q9UPN6 1271 aaKnown RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 PTPN22Q9Y2R2 807 aa6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 RRP7AQ9Y3A4 280 aaKnown RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 COL3A1P02461 1466 aaPredicted RBP6.44□□□□□ -1.38
NPIPB4-219ENST00000543660 ECE2O60344 883 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 HCLS1P14317 486 aaPredicted RBP6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 MYL6BP14649 208 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 RBM25P49756 843 aaKnown RBP6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 MFAP1P55081 439 aaKnown RBP6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 PDE4CQ08493 712 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 PDE4DQ08499 809 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 SREBF2Q12772 1141 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 CAMK2BQ13554 666 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 DCTN1Q14203 1278 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 PRAMEF18Q5VWM3 479 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 PPP1R18Q6NYC8 613 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 DDX46Q7L014 1031 aaKnown RBP6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 MIS18AQ9NYP9 233 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 RBM27Q9P2N5 1060 aaKnown RBP6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 SERPINA10Q9UK55 444 aa6.43□□□□□ -1.38
NPIPB4-219ENST00000543660 E9PSI1 815 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms