RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 ISY1Q9ULR0 285 aaKnown RBP9.43□□□□□ -0.9
TRIM59-208ENST00000543469 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 ZNF444Q8N0Y2 327 aaPredicted RBP9.43□□□□□ -0.9
TRIM59-208ENST00000543469 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 CALM1P0DP23 149 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 CALM2P0DP24 149 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 CALM3P0DP25 149 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 NEK4P51957 841 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 PPIP5K2O43314 1243 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 NMIQ13287 307 aaPredicted RBP9.42□□□□□ -0.9
TRIM59-208ENST00000543469 PPP2R5BQ15173 497 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 SIRT2Q8IXJ6 389 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
TRIM59-208ENST00000543469 ESR2Q92731 530 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 TBC1D32Q96NH3 1257 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 RIPOR2Q9Y4F9 1068 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
TRIM59-208ENST00000543469 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
TRIM59-208ENST00000543469 GNAQP50148 359 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 CASP7P55210 303 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 TIMM10P62072 90 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 HMGN5P82970 282 aaKnown RBP9.42□□□□□ -0.9
TRIM59-208ENST00000543469 TNFAIP1Q13829 316 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 LRRC24Q50LG9 513 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 MFSD6Q6ZSS7 791 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
TRIM59-208ENST00000543469 CD2APQ9Y5K6 639 aa9.42□□□□□ -0.9
TRIM59-208ENST00000543469 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SGSM2O43147 1006 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 ARID4AP29374 1257 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-208ENST00000543469 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-208ENST00000543469 MKNK2Q9HBH9 465 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 CABP5Q9NP86 173 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 MINPP1Q9UNW1 487 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 PAPPAQ13219 1627 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 MCM5P33992 734 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 TM6SF1Q9BZW5 370 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SLKQ9H2G2 1235 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-208ENST00000543469 ARPP21Q9UBL0 812 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SLC4A4Q9Y6R1 1079 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 KIF5BP33176 963 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 GIMAP6Q6P9H5 292 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 MAGEB6Q8N7X4 407 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 HELBQ8NG08 1087 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SIPA1L3O60292 1781 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SASH1O94885 1247 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 NF2P35240 595 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 RFX5P48382 616 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SNX21Q969T3 373 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SH2D4AQ9H788 454 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 ZNF609O15014 1411 aa9.41□□□□□ -0.9
TRIM59-208ENST00000543469 UBN2Q6ZU65 1347 aa9.4□□□□□ -0.9
TRIM59-208ENST00000543469 SKOR2Q2VWA4 1001 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-208ENST00000543469 EPHA10Q5JZY3 1008 aa9.4□□□□□ -0.9
TRIM59-208ENST00000543469 C15orf52Q6ZUT6 534 aaKnown RBP9.4□□□□□ -0.9
TRIM59-208ENST00000543469 LRP10Q7Z4F1 713 aa9.4□□□□□ -0.9
TRIM59-208ENST00000543469 TEKT1Q969V4 418 aa9.4□□□□□ -0.9
TRIM59-208ENST00000543469 NEK1Q96PY6 1258 aa9.4□□□□□ -0.9
TRIM59-208ENST00000543469 DBNLQ9UJU6 430 aaKnown RBP9.4□□□□□ -0.9
TRIM59-208ENST00000543469 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-208ENST00000543469 PRPF40BQ6NWY9 871 aaKnown RBP9.4□□□□□ -0.9
TRIM59-208ENST00000543469 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.9
TRIM59-208ENST00000543469 ZNF831Q5JPB2 1677 aa9.4□□□□□ -0.9
TRIM59-208ENST00000543469 RBM25P49756 843 aaKnown RBP9.4□□□□□ -0.91
TRIM59-208ENST00000543469 C16orf71Q8IYS4 520 aaPredicted RBP9.4□□□□□ -0.91
TRIM59-208ENST00000543469 KLHDC4Q8TBB5 520 aa9.4□□□□□ -0.91
TRIM59-208ENST00000543469 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.91
TRIM59-208ENST00000543469 RBM8AQ9Y5S9 174 aaKnown RBP9.4□□□□□ -0.91
TRIM59-208ENST00000543469 POLRMTO00411 1230 aaKnown RBP9.39□□□□□ -0.91
TRIM59-208ENST00000543469 TM4SF1P30408 202 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 TMEM87BQ96K49 555 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 CAMKK2Q96RR4 588 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 SEC31BQ9NQW1 1179 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 ZMYM1Q5SVZ6 1142 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 TAOK3Q9H2K8 898 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 PNMA2Q9UL42 364 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 LIMCH1Q9UPQ0 1083 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 MED23Q9ULK4 1368 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 PATL2C9JE40 543 aaKnown RBP9.39□□□□□ -0.91
TRIM59-208ENST00000543469 TAF5LO75529 589 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 ZAP70P43403 619 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 KCNQ4P56696 695 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 CATIPQ7Z7H3 387 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 MTA3Q9BTC8 594 aa9.39□□□□□ -0.91
TRIM59-208ENST00000543469 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 FKBP1AP62942 108 aaKnown RBP9.38□□□□□ -0.91
TRIM59-208ENST00000543469 DPY19L2Q6NUT2 758 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 ATG9AQ7Z3C6 839 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 UBR2Q8IWV8 1755 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 ITGB4P16144 1822 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 CASTP20810 708 aaKnown RBP9.38□□□□□ -0.91
TRIM59-208ENST00000543469 C8orf34Q49A92 452 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 CCDC12Q8WUD4 166 aaPredicted RBP9.38□□□□□ -0.91
TRIM59-208ENST00000543469 PUS3Q9BZE2 481 aaKnown RBP9.38□□□□□ -0.91
TRIM59-208ENST00000543469 H7C1D1 291 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 TEX11Q8IYF3 940 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms