RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 PRMT2P55345 433 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 GTF2IP78347 998 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 KIF22Q14807 665 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 NBPF12Q5TAG4 269 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-219ENST00000542930 UBE2Q1Q7Z7E8 422 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 LEMD3Q9Y2U8 911 aa12.2□□□□□ -0.46
C2CD3-219ENST00000542930 WDHD1O75717 1129 aaPredicted RBP12.19□□□□□ -0.46
C2CD3-219ENST00000542930 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
C2CD3-219ENST00000542930 MYD88Q99836 296 aa12.19□□□□□ -0.46
C2CD3-219ENST00000542930 ELP3Q9H9T3 547 aa12.19□□□□□ -0.46
C2CD3-219ENST00000542930 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
C2CD3-219ENST00000542930 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 CLRN2A0PK11 232 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 SOX1O00570 391 aaPredicted RBP12.18□□□□□ -0.46
C2CD3-219ENST00000542930 TLR2O60603 784 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 TMPOP42166 694 aaKnown RBP12.18□□□□□ -0.46
C2CD3-219ENST00000542930 GTF2A2P52657 109 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 CTSWP56202 376 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 LACTBP83111 547 aaPredicted RBP12.18□□□□□ -0.46
C2CD3-219ENST00000542930 MTFR1Q15390 333 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 CCL15Q16663 113 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
C2CD3-219ENST00000542930 ARHGAP39Q9C0H5 1083 aa12.18□□□□□ -0.46
C2CD3-219ENST00000542930 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
C2CD3-219ENST00000542930 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 GJA8P48165 433 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 RASA3Q14644 834 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 TTLL11Q8NHH1 800 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 LRCH3Q96II8 777 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 PRMT6Q96LA8 375 aaPredicted RBP12.17□□□□□ -0.46
C2CD3-219ENST00000542930 VEZTQ9HBM0 779 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 PCDHAC2Q9Y5I4 1007 aa12.17□□□□□ -0.46
C2CD3-219ENST00000542930 GJB1P08034 283 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 KLRK1P26718 216 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 CFAP100Q494V2 611 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.16□□□□□ -0.46
C2CD3-219ENST00000542930 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 ANKRD2Q9GZV1 360 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 GREM2Q9H772 168 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
C2CD3-219ENST00000542930 LAS1LQ9Y4W2 734 aaKnown RBP12.16□□□□□ -0.46
C2CD3-219ENST00000542930 ECM29Q5VYK3 1845 aa12.16□□□□□ -0.46
C2CD3-219ENST00000542930 VCANP13611 3396 aa12.15□□□□□ -0.46
C2CD3-219ENST00000542930 TNFAIP1Q13829 316 aa12.15□□□□□ -0.46
C2CD3-219ENST00000542930 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
C2CD3-219ENST00000542930 PHAXQ9H814 394 aaKnown RBP12.15□□□□□ -0.46
C2CD3-219ENST00000542930 CD209Q9NNX6 404 aa12.15□□□□□ -0.46
C2CD3-219ENST00000542930 GRK4P32298 578 aa12.14□□□□□ -0.47
C2CD3-219ENST00000542930 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
C2CD3-219ENST00000542930 FKBP1AP62942 108 aaKnown RBP12.14□□□□□ -0.47
C2CD3-219ENST00000542930 VGLL4Q14135 290 aa12.14□□□□□ -0.47
C2CD3-219ENST00000542930 DUSP27Q5VZP5 1158 aa12.14□□□□□ -0.47
C2CD3-219ENST00000542930 HELBQ8NG08 1087 aaPredicted RBP12.14□□□□□ -0.47
C2CD3-219ENST00000542930 METTL22Q9BUU2 404 aaPredicted RBP12.14□□□□□ -0.47
C2CD3-219ENST00000542930 SRRDQ9UH36 339 aa12.14□□□□□ -0.47
C2CD3-219ENST00000542930 AOX1Q06278 1338 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 OTOFQ9HC10 1997 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
C2CD3-219ENST00000542930 EVI5O60447 810 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 CETPP11597 493 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 CCL5P13501 91 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 MAP3K9P80192 1104 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 C17orf99Q6UX52 265 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
C2CD3-219ENST00000542930 RAET1EQ8TD07 263 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 RNF208Q9H0X6 261 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 STXBP5LQ9Y2K9 1186 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 CSADQ9Y600 493 aa12.13□□□□□ -0.47
C2CD3-219ENST00000542930 ZSWIM8A7E2V4 1837 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 BTBD19C9JJ37 291 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
C2CD3-219ENST00000542930 HOXD10P28358 340 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 KCNJ4P48050 445 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 RBM5P52756 815 aaKnown RBP eCLIP12.12□□□□□ -0.47
C2CD3-219ENST00000542930 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
C2CD3-219ENST00000542930 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 TEPSINQ96N21 525 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 COL25A1Q9BXS0 654 aaPredicted RBP12.12□□□□□ -0.47
C2CD3-219ENST00000542930 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
C2CD3-219ENST00000542930 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 DDX58O95786 925 aaKnown RBP12.11□□□□□ -0.47
C2CD3-219ENST00000542930 IL1R1P14778 569 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 OSBPP22059 807 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 CTGFP29279 349 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 PSMC4P43686 418 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 UBXN2AP68543 259 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 C15orf52Q6ZUT6 534 aaKnown RBP12.11□□□□□ -0.47
C2CD3-219ENST00000542930 U2AF1L4Q8WU68 220 aaKnown RBP12.11□□□□□ -0.47
C2CD3-219ENST00000542930 MPHOSPH8Q99549 860 aa12.11□□□□□ -0.47
C2CD3-219ENST00000542930 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms