RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 INHBEP58166 350 aa14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 PRKG1Q13976 671 aa14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 STRIP1Q5VSL9 837 aa14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 SPRYD7Q5W111 196 aa14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 APOBEC3FQ8IUX4 373 aaKnown RBP14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 MXD3Q9BW11 206 aa14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 CWC25Q9NXE8 425 aaPredicted RBP14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 TRIM17Q9Y577 477 aa14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 SASH1O94885 1247 aa14.47□□□□□ -0.09
SRGAP1-205ENST00000542841 FLIIQ13045 1269 aa14.47□□□□□ -0.09
SRGAP1-205ENST00000542841 JARID2Q92833 1246 aaPredicted RBP14.47□□□□□ -0.09
SRGAP1-205ENST00000542841 CLUAP1Q96AJ1 413 aa14.47□□□□□ -0.09
SRGAP1-205ENST00000542841 COA1Q9GZY4 146 aa14.47□□□□□ -0.09
SRGAP1-205ENST00000542841 PHAXQ9H814 394 aaKnown RBP14.47□□□□□ -0.09
SRGAP1-205ENST00000542841 MANSC4A6NHS7 340 aaPredicted RBP14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 WTIPA6NIX2 430 aaPredicted RBP14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 LDLRAD1Q5T700 205 aa14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 OTOP1Q7RTM1 612 aa14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 TMEM57Q8N5G2 664 aa14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 BSDC1Q9NW68 430 aaPredicted RBP14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 ANGEL1Q9UNK9 670 aaKnown RBP14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 MINPP1Q9UNW1 487 aa14.46□□□□□ -0.09
SRGAP1-205ENST00000542841 POTEFA5A3E0 1075 aa14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 DDX58O95786 925 aaKnown RBP14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 CCT4P50991 539 aaKnown RBP14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 CTSWP56202 376 aa14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 IFNL1Q8IU54 200 aa14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 ITPRIPQ8IWB1 547 aa14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 SLC10A4Q96EP9 437 aa14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 TNNQ9UQP3 1299 aa14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 CENPFP49454 3210 aa14.45□□□□□ -0.1
SRGAP1-205ENST00000542841 ZBTB48P10074 688 aaPredicted RBP14.44□□□□□ -0.1
SRGAP1-205ENST00000542841 TTLL5Q6EMB2 1281 aa14.44□□□□□ -0.1
SRGAP1-205ENST00000542841 B4GALNT3Q6L9W6 998 aa14.44□□□□□ -0.1
SRGAP1-205ENST00000542841 KIAA0825Q8IV33 1275 aa14.44□□□□□ -0.1
SRGAP1-205ENST00000542841 METTL22Q9BUU2 404 aaPredicted RBP14.44□□□□□ -0.1
SRGAP1-205ENST00000542841 BRCA2P51587 3418 aa14.44□□□□□ -0.1
SRGAP1-205ENST00000542841 HTTP42858 3142 aa14.44□□□□□ -0.1
SRGAP1-205ENST00000542841 FKBP5Q13451 457 aaPredicted RBP14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 TTLL11Q8NHH1 800 aa14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 ERO1AQ96HE7 468 aa14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 DEFB129Q9H1M3 183 aa14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 PTPN22Q9Y2R2 807 aa14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 LEMD3Q9Y2U8 911 aa14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 COL1A1P02452 1464 aaPredicted RBP14.43□□□□□ -0.1
SRGAP1-205ENST00000542841 PPP1R12BO60237 982 aaPredicted RBP14.42□□□□□ -0.1
SRGAP1-205ENST00000542841 MAP3K11Q16584 847 aa14.42□□□□□ -0.1
SRGAP1-205ENST00000542841 OTUD7BQ6GQQ9 843 aa14.42□□□□□ -0.1
SRGAP1-205ENST00000542841 G2E3Q7L622 706 aa14.42□□□□□ -0.1
SRGAP1-205ENST00000542841 GREM2Q9H772 168 aa14.42□□□□□ -0.1
SRGAP1-205ENST00000542841 FZD1Q9UP38 647 aa14.42□□□□□ -0.1
SRGAP1-205ENST00000542841 UNCXA6NJT0 531 aa14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 IGF2BP3O00425 579 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 GTF2IP78347 998 aa14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 CENPQQ7L2Z9 268 aaPredicted RBP14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 TXNRD3Q86VQ6 643 aa14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 ZBED3Q96IU2 234 aaPredicted RBP14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 WNK4Q96J92 1243 aa14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 ZBTB40Q9NUA8 1239 aa14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 PPP2R3BQ9Y5P8 575 aa14.41□□□□□ -0.1
SRGAP1-205ENST00000542841 IGHMBP2P38935 993 aaKnown RBP14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 DLGAP5Q15398 846 aa14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 CD99L2Q8TCZ2 262 aa14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 ARMC5Q96C12 935 aa14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 CLMNQ96JQ2 1002 aa14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 EFCC1Q9HA90 598 aa14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 MAP3K2Q9Y2U5 619 aa14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 ZNF804BA4D1E1 1349 aa14.4□□□□□ -0.1
SRGAP1-205ENST00000542841 ZNF646O15015 1829 aaPredicted RBP14.39□□□□□ -0.11
SRGAP1-205ENST00000542841 EN2P19622 333 aaPredicted RBP14.39□□□□□ -0.11
SRGAP1-205ENST00000542841 FXR1P51114 621 aaKnown RBP eCLIP14.39□□□□□ -0.11
SRGAP1-205ENST00000542841 NEXNQ0ZGT2 675 aa14.39□□□□□ -0.11
SRGAP1-205ENST00000542841 CRHR2Q13324 411 aa14.39□□□□□ -0.11
SRGAP1-205ENST00000542841 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
SRGAP1-205ENST00000542841 ANKRD2Q9GZV1 360 aa14.39□□□□□ -0.11
SRGAP1-205ENST00000542841 MYO1BO43795 1136 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 IGKV5-2P06315 115 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 KLRK1P26718 216 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 KCNJ4P48050 445 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 IREB2P48200 963 aaKnown RBP14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 SP3Q02447 781 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 KSR2Q6VAB6 950 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 MTMR14Q8NCE2 650 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 DNAAF4Q8WXU2 420 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 MPHOSPH8Q99549 860 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 TMEM106CQ9BVX2 250 aa14.38□□□□□ -0.11
SRGAP1-205ENST00000542841 RBBP6Q7Z6E9 1792 aaKnown RBP14.37□□□□□ -0.11
SRGAP1-205ENST00000542841 PI4KAP2A4QPH2 592 aa14.37□□□□□ -0.11
SRGAP1-205ENST00000542841 HDAC1Q13547 482 aaPredicted RBP14.37□□□□□ -0.11
SRGAP1-205ENST00000542841 PI4KAP1Q8N8J0 262 aa14.37□□□□□ -0.11
SRGAP1-205ENST00000542841 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
SRGAP1-205ENST00000542841 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 SSC5DA1L4H1 1573 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 ALDH1L1O75891 902 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 GNAI3P08754 354 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 ITGA6P23229 1130 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 NBPF11Q86T75 865 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms