RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 CYP4F12Q9HCS2 524 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 DDX3YO15523 660 aaKnown RBP4.98□□□□□ -1.61
KNTC1-213ENST00000542727 PHACTR2O75167 634 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 SSFA2P28290 1259 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 TXKP42681 527 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 PREPP48147 710 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 GP2P55259 537 aaKnown RBP4.98□□□□□ -1.61
KNTC1-213ENST00000542727 NLRP12P59046 1061 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 SF3B2Q13435 895 aaKnown RBP4.98□□□□□ -1.61
KNTC1-213ENST00000542727 IKBKEQ14164 716 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 DTX1Q86Y01 620 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 GTF3C2Q8WUA4 911 aaPredicted RBP4.98□□□□□ -1.61
KNTC1-213ENST00000542727 SLC7A3Q8WY07 619 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 OSMRQ99650 979 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 BHLHE41Q9C0J9 482 aaPredicted RBP4.98□□□□□ -1.61
KNTC1-213ENST00000542727 GGNBP2Q9H3C7 697 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 SUGCTQ9HAC7 445 aa4.98□□□□□ -1.61
KNTC1-213ENST00000542727 PRR19A6NJB7 356 aa4.97□□□□□ -1.61
KNTC1-213ENST00000542727 TNFRSF21O75509 655 aa4.97□□□□□ -1.61
KNTC1-213ENST00000542727 NUTM2GQ5VZR2 741 aa4.97□□□□□ -1.61
KNTC1-213ENST00000542727 SMG8Q8ND04 991 aaKnown RBP4.97□□□□□ -1.61
KNTC1-213ENST00000542727 NXPE3Q969Y0 559 aa4.97□□□□□ -1.61
KNTC1-213ENST00000542727 ZKSCAN3Q9BRR0 538 aa4.97□□□□□ -1.61
KNTC1-213ENST00000542727 GOLGA2P5Q9HBQ8 144 aa4.97□□□□□ -1.61
KNTC1-213ENST00000542727 POLIQ9UNA4 740 aa4.97□□□□□ -1.61
KNTC1-213ENST00000542727 TMEM88BA6NKF7 163 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 WNT11O96014 354 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 ACPPP15309 386 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 AAMPQ13685 434 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 HP1BP3Q5SSJ5 553 aaPredicted RBP4.96□□□□□ -1.62
KNTC1-213ENST00000542727 VN1R5Q7Z5H4 357 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 SHKBP1Q8TBC3 707 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 FMNL2Q96PY5 1086 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 YIPF2Q9BWQ6 316 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 TMPRSS13Q9BYE2 586 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 AMOTL2Q9Y2J4 779 aa4.96□□□□□ -1.62
KNTC1-213ENST00000542727 A6NHS1 94 aa4.95□□□□□ -1.62
KNTC1-213ENST00000542727 SOX1O00570 391 aaPredicted RBP4.95□□□□□ -1.62
KNTC1-213ENST00000542727 EREGO14944 169 aa4.95□□□□□ -1.62
KNTC1-213ENST00000542727 MED26O95402 600 aa4.95□□□□□ -1.62
KNTC1-213ENST00000542727 TIAF1O95411 115 aa4.95□□□□□ -1.62
KNTC1-213ENST00000542727 MAP4P27816 1152 aaKnown RBP4.95□□□□□ -1.62
KNTC1-213ENST00000542727 METTL22Q9BUU2 404 aaPredicted RBP4.95□□□□□ -1.62
KNTC1-213ENST00000542727 ZFYVE1Q9HBF4 777 aa4.95□□□□□ -1.62
KNTC1-213ENST00000542727 PIM2Q9P1W9 311 aa4.95□□□□□ -1.62
KNTC1-213ENST00000542727 OAS3Q9Y6K5 1087 aaKnown RBP4.95□□□□□ -1.62
KNTC1-213ENST00000542727 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 LOC100289279A0A1B0GTE1 492 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 ESRRAP11474 423 aaPredicted RBP4.94□□□□□ -1.62
KNTC1-213ENST00000542727 FKBP4Q02790 459 aaKnown RBP eCLIP4.94□□□□□ -1.62
KNTC1-213ENST00000542727 EXOSC6Q5RKV6 272 aaKnown RBP4.94□□□□□ -1.62
KNTC1-213ENST00000542727 B4GALNT3Q6L9W6 998 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 GJD3Q8N144 294 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 C12orf50Q8NA57 414 aaPredicted RBP4.94□□□□□ -1.62
KNTC1-213ENST00000542727 ASAP3Q8TDY4 903 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 HHIPQ96QV1 700 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 USP26Q9BXU7 913 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 ATG3Q9NT62 314 aa4.94□□□□□ -1.62
KNTC1-213ENST00000542727 WDR64B1ANS9 1081 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 TRPA1O75762 1119 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 NEFLP07196 543 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 RXRBP28702 533 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 SGO2Q562F6 1265 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 PAOXQ6QHF9 649 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 DDX54Q8TDD1 881 aaKnown RBP4.93□□□□□ -1.62
KNTC1-213ENST00000542727 MFSD14AQ96MC6 490 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 OSBPL1AQ9BXW6 950 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 EGFL7Q9UHF1 273 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 LEMD3Q9Y2U8 911 aa4.93□□□□□ -1.62
KNTC1-213ENST00000542727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.93□□□□□ -1.62
KNTC1-213ENST00000542727 FAM95CA0A1B0GW59 222 aa4.92□□□□□ -1.62
KNTC1-213ENST00000542727 FZD6O60353 706 aa4.92□□□□□ -1.62
KNTC1-213ENST00000542727 CYP11A1P05108 521 aa4.92□□□□□ -1.62
KNTC1-213ENST00000542727 FOSL1P15407 271 aa4.92□□□□□ -1.62
KNTC1-213ENST00000542727 TAL1P17542 331 aaPredicted RBP4.92□□□□□ -1.62
KNTC1-213ENST00000542727 USP11P51784 963 aa4.92□□□□□ -1.62
KNTC1-213ENST00000542727 PEAR1Q5VY43 1037 aaPredicted RBP4.92□□□□□ -1.62
KNTC1-213ENST00000542727 EZH1Q92800 747 aaPredicted RBP4.92□□□□□ -1.62
KNTC1-213ENST00000542727 CLEC4MQ9H2X3 399 aaPredicted RBP4.92□□□□□ -1.62
KNTC1-213ENST00000542727 ZFYVE28Q9HCC9 887 aa4.92□□□□□ -1.62
KNTC1-213ENST00000542727 FOXD3Q9UJU5 478 aaPredicted RBP4.92□□□□□ -1.62
KNTC1-213ENST00000542727 ANGEL1Q9UNK9 670 aaKnown RBP4.92□□□□□ -1.62
KNTC1-213ENST00000542727 ARID3CA6NKF2 412 aa4.91□□□□□ -1.62
KNTC1-213ENST00000542727 PRNPP04156 253 aa4.91□□□□□ -1.62
KNTC1-213ENST00000542727 YBX3P16989 372 aaKnown RBP eCLIP4.91□□□□□ -1.62
KNTC1-213ENST00000542727 MTMR3Q13615 1198 aa4.91□□□□□ -1.62
KNTC1-213ENST00000542727 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
KNTC1-213ENST00000542727 CCDC82Q8N4S0 544 aa4.91□□□□□ -1.62
KNTC1-213ENST00000542727 USTQ9Y2C2 406 aa4.91□□□□□ -1.62
KNTC1-213ENST00000542727 F13BP05160 661 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 HNRNPUQ00839 825 aaKnown RBP eCLIP4.9□□□□□ -1.63
KNTC1-213ENST00000542727 CYP27A1Q02318 531 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 GSTM4Q03013 218 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 SOX4Q06945 474 aaPredicted RBP4.9□□□□□ -1.63
KNTC1-213ENST00000542727 MAP7Q14244 749 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 NFKBIBQ15653 356 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 MSMPQ1L6U9 139 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 HGSNATQ68CP4 663 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 VSIG10LQ86VR7 867 aa4.9□□□□□ -1.63
KNTC1-213ENST00000542727 CCNJLQ8IV13 435 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms