RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 COL4A1P02462 1669 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 CHMLP26374 656 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 CHRNDQ07001 517 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 GRAPQ13588 217 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
LDHA-220ENST00000542179 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 ANKRD2Q9GZV1 360 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 GPHNQ9NQX3 736 aaPredicted RBP11.23□□□□□ -0.61
LDHA-220ENST00000542179 MINPP1Q9UNW1 487 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
LDHA-220ENST00000542179 BBOX1O75936 387 aa11.22□□□□□ -0.61
LDHA-220ENST00000542179 SLC5A1P13866 664 aa11.22□□□□□ -0.61
LDHA-220ENST00000542179 PDE6BP35913 854 aa11.22□□□□□ -0.61
LDHA-220ENST00000542179 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
LDHA-220ENST00000542179 RFX7Q2KHR2 1363 aa11.22□□□□□ -0.61
LDHA-220ENST00000542179 RPGRQ92834 1020 aaKnown RBP11.22□□□□□ -0.61
LDHA-220ENST00000542179 RBM17Q96I25 401 aaKnown RBP11.22□□□□□ -0.61
LDHA-220ENST00000542179 BOLA2Q9H3K6 86 aa11.22□□□□□ -0.61
LDHA-220ENST00000542179 SPEF2Q9C093 1822 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 A0A1B0GUL6 1792 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 HIP1O00291 1037 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 EPB41L2O43491 1005 aaKnown RBP11.21□□□□□ -0.61
LDHA-220ENST00000542179 TAF5LO75529 589 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 MAP4K4O95819 1239 aaPredicted RBP11.21□□□□□ -0.61
LDHA-220ENST00000542179 IFIT1P09914 478 aaKnown RBP11.21□□□□□ -0.61
LDHA-220ENST00000542179 UQCRFS1P1P0C7P4 283 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 ADORA1P30542 326 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 FOXK1P85037 733 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 GORABQ5T7V8 394 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 TMC4Q7Z404 712 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
LDHA-220ENST00000542179 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.619e-7■■■□□ 18.5
LDHA-220ENST00000542179 KRTAP3-3Q9BYR6 98 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 KRTAP3-2Q9BYR7 98 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
LDHA-220ENST00000542179 AK9Q5TCS8 1911 aa11.21□□□□□ -0.62
LDHA-220ENST00000542179 TAF1P21675 1872 aa11.21□□□□□ -0.62
LDHA-220ENST00000542179 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.62
LDHA-220ENST00000542179 ARID4AP29374 1257 aaPredicted RBP11.2□□□□□ -0.62
LDHA-220ENST00000542179 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
LDHA-220ENST00000542179 TTC39AQ5SRH9 613 aa11.2□□□□□ -0.62
LDHA-220ENST00000542179 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
LDHA-220ENST00000542179 TBC1D32Q96NH3 1257 aa11.2□□□□□ -0.62
LDHA-220ENST00000542179 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
LDHA-220ENST00000542179 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
LDHA-220ENST00000542179 REC8O95072 547 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 SRGNP10124 158 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 NPR1P16066 1061 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 RBM25P49756 843 aaKnown RBP11.19□□□□□ -0.62
LDHA-220ENST00000542179 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 MSL1Q68DK7 614 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 KBTBD3Q8NAB2 608 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 RUFY2Q8WXA3 655 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 C22orf23Q9BZE7 217 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 SNRKQ9NRH2 765 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 PAG1Q9NWQ8 432 aa11.19□□□□□ -0.62
LDHA-220ENST00000542179 SGSM2O43147 1006 aa11.18□□□□□ -0.62
LDHA-220ENST00000542179 NUDT7P0C024 238 aa11.18□□□□□ -0.62
LDHA-220ENST00000542179 ALDH1B1P30837 517 aa11.18□□□□□ -0.62
LDHA-220ENST00000542179 SP8Q8IXZ3 490 aa11.18□□□□□ -0.62
LDHA-220ENST00000542179 MASTLQ96GX5 879 aa11.18□□□□□ -0.62
LDHA-220ENST00000542179 USP26Q9BXU7 913 aa11.18□□□□□ -0.62
LDHA-220ENST00000542179 LEMD3Q9Y2U8 911 aa11.18□□□□□ -0.62
LDHA-220ENST00000542179 ZNF804BA4D1E1 1349 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 XDHP47989 1333 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 RAD50Q92878 1312 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
LDHA-220ENST00000542179 PHKA1P46020 1223 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 TTF1Q15361 905 aaPredicted RBP11.17□□□□□ -0.62
LDHA-220ENST00000542179 LRRFIP1Q32MZ4 808 aaKnown RBP11.17□□□□□ -0.62
LDHA-220ENST00000542179 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 C15orf52Q6ZUT6 534 aaKnown RBP11.17□□□□□ -0.62
LDHA-220ENST00000542179 DNAJC2Q99543 621 aaKnown RBP11.17□□□□□ -0.62
LDHA-220ENST00000542179 FSD1Q9BTV5 496 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 PDGFDQ9GZP0 370 aaPredicted RBP11.17□□□□□ -0.62
LDHA-220ENST00000542179 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 PODXL2Q9NZ53 605 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 AKAP11Q9UKA4 1901 aa11.17□□□□□ -0.62
LDHA-220ENST00000542179 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 LRRC37AA6NMS7 1700 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 H0YIN7 160 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 SNAP23O00161 211 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 GOLIM4O00461 696 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 SEMA3EO15041 775 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 TBC1D12O60347 775 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 MCAMP43121 646 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 MMRN1Q13201 1228 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 SCARF1Q14162 830 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 CAVIN4Q5BKX8 364 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 EDC3Q96F86 508 aaKnown RBP11.16□□□□□ -0.62
LDHA-220ENST00000542179 FAM84BQ96KN1 310 aaPredicted RBP11.16□□□□□ -0.62
LDHA-220ENST00000542179 GNL3LQ9NVN8 582 aaKnown RBP11.16□□□□□ -0.62
LDHA-220ENST00000542179 ATP6V0A2Q9Y487 856 aa11.16□□□□□ -0.62
LDHA-220ENST00000542179 PDS5AQ29RF7 1337 aaKnown RBP11.15□□□□□ -0.62
LDHA-220ENST00000542179 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms