RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CCZ1P86791 482 aaPredicted RBP17.83■□□□□ 0.44
CNOT9-208ENST00000542068 CCAR2Q8N163 923 aaKnown RBP17.83■□□□□ 0.44
CNOT9-208ENST00000542068 CPLX1O14810 134 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 ERCC6LQ2NKX8 1250 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 USPL1Q5W0Q7 1092 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 KIF6Q6ZMV9 814 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 HAUS7Q99871 368 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 EYA2O00167 538 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
CNOT9-208ENST00000542068 LDHAL6AQ6ZMR3 332 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 MRPS27Q92552 414 aaKnown RBP17.82■□□□□ 0.44
CNOT9-208ENST00000542068 NCAPD2Q15021 1401 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 PDIA3P30101 505 aaKnown RBP17.82■□□□□ 0.44
CNOT9-208ENST00000542068 MRFAP1L1Q96HT8 127 aa17.82■□□□□ 0.44
CNOT9-208ENST00000542068 LRRC37A3O60309 1634 aa17.81■□□□□ 0.44
CNOT9-208ENST00000542068 IFIT5Q13325 482 aaKnown RBP17.81■□□□□ 0.44
CNOT9-208ENST00000542068 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
CNOT9-208ENST00000542068 DDX41Q9UJV9 622 aaKnown RBP17.81■□□□□ 0.44
CNOT9-208ENST00000542068 SNAP23O00161 211 aa17.81■□□□□ 0.44
CNOT9-208ENST00000542068 CTAGE5O15320 804 aa17.81■□□□□ 0.44
CNOT9-208ENST00000542068 IL15P40933 162 aaPredicted RBP17.81■□□□□ 0.44
CNOT9-208ENST00000542068 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
CNOT9-208ENST00000542068 HSPD1P10809 573 aaKnown RBP17.8■□□□□ 0.44
CNOT9-208ENST00000542068 FOXO4P98177 505 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 TSGA10IPQ3SY00 556 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 TRERF1Q96PN7 1200 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 NAT10Q9H0A0 1025 aaKnown RBP17.8■□□□□ 0.44
CNOT9-208ENST00000542068 SMARCC2Q8TAQ2 1214 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 UTYO14607 1347 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 GNL2Q13823 731 aaKnown RBP17.8■□□□□ 0.44
CNOT9-208ENST00000542068 BRINP3Q76B58 766 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 CCDC82Q8N4S0 544 aa17.8■□□□□ 0.44
CNOT9-208ENST00000542068 HEG1Q9ULI3 1381 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 SFPQP23246 707 aaKnown RBP eCLIP17.79■□□□□ 0.44
CNOT9-208ENST00000542068 ZAP70P43403 619 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 KLF18A0A0U1RQI7 1052 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 GOLGA8BA8MQT2 603 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 ZBTB22O15209 634 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 ATP1A3P13637 1013 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 NAA16Q6N069 864 aaPredicted RBP17.79■□□□□ 0.44
CNOT9-208ENST00000542068 SYNE3Q6ZMZ3 975 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 ZNF397Q8NF99 534 aaPredicted RBP17.79■□□□□ 0.44
CNOT9-208ENST00000542068 XAGE2Q96GT9 111 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 ORC3Q9UBD5 711 aaPredicted RBP17.79■□□□□ 0.44
CNOT9-208ENST00000542068 TRMT112Q9UI30 125 aaKnown RBP17.79■□□□□ 0.44
CNOT9-208ENST00000542068 PCDH11XQ9BZA7 1347 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 PCDH11YQ9BZA8 1340 aa17.79■□□□□ 0.44
CNOT9-208ENST00000542068 SLU7O95391 586 aaKnown RBP17.78■□□□□ 0.44
CNOT9-208ENST00000542068 SLC3A2P08195 630 aaKnown RBP17.78■□□□□ 0.44
CNOT9-208ENST00000542068 SCARF1Q14162 830 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 ALDH8A1Q9H2A2 487 aaPredicted RBP17.78■□□□□ 0.44
CNOT9-208ENST00000542068 IQSEC3Q9UPP2 1182 aaPredicted RBP17.78■□□□□ 0.44
CNOT9-208ENST00000542068 SPATA31A3Q5VYP0 1347 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
CNOT9-208ENST00000542068 RRP12Q5JTH9 1297 aaKnown RBP17.78■□□□□ 0.44
CNOT9-208ENST00000542068 NBPF11Q86T75 865 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 OSBP2Q969R2 916 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.78■□□□□ 0.442e-7■□□□□ 10.3
CNOT9-208ENST00000542068 M0R2C6 588 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 KIF20AO95235 890 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
CNOT9-208ENST00000542068 CDC25BP30305 580 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 SARM1Q6SZW1 724 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 KRT222Q8N1A0 295 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 DNAI1Q9UI46 699 aa17.78■□□□□ 0.44
CNOT9-208ENST00000542068 NYAP1Q6ZVC0 841 aa17.77■□□□□ 0.44
CNOT9-208ENST00000542068 BTG4Q9NY30 223 aa17.77■□□□□ 0.44
CNOT9-208ENST00000542068 H7C1W4 665 aa17.77■□□□□ 0.43
CNOT9-208ENST00000542068 RNF113AO15541 343 aaKnown RBP17.77■□□□□ 0.43
CNOT9-208ENST00000542068 CAVIN2O95810 425 aa17.77■□□□□ 0.43
CNOT9-208ENST00000542068 ARMCX5Q6P1M9 558 aa17.77■□□□□ 0.43
CNOT9-208ENST00000542068 CARMIL3Q8ND23 1372 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 MAST3O60307 1309 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 RBM6P78332 1123 aaKnown RBP17.76■□□□□ 0.43
CNOT9-208ENST00000542068 E4F1Q66K89 784 aaPredicted RBP17.76■□□□□ 0.43
CNOT9-208ENST00000542068 LRP10Q7Z4F1 713 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 FMR1NBQ8N0W7 255 aaPredicted RBP17.76■□□□□ 0.43
CNOT9-208ENST00000542068 EPC1Q9H2F5 836 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 KIAA1468Q9P260 1216 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 SLAIN2Q9P270 581 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 SPTLC2O15270 562 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 NEMFO60524 1076 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 HMGB1P09429 215 aaKnown RBP17.76■□□□□ 0.43
CNOT9-208ENST00000542068 CHMP4CQ96CF2 233 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 PPP1R13BQ96KQ4 1090 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
CNOT9-208ENST00000542068 DENND2AQ9ULE3 1009 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 SERPINC1P01008 464 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 HLFQ16534 295 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
CNOT9-208ENST00000542068 CCDC191Q8NCU4 936 aa17.76■□□□□ 0.43
CNOT9-208ENST00000542068 ZNF202O95125 648 aa17.75■□□□□ 0.43
CNOT9-208ENST00000542068 ATP2B1P20020 1258 aa17.75■□□□□ 0.43
CNOT9-208ENST00000542068 SPECC1Q5M775 1068 aa17.75■□□□□ 0.43
CNOT9-208ENST00000542068 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
CNOT9-208ENST00000542068 ACSBG1Q96GR2 724 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms