RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 M0R2C6 588 aa13.51□□□□□ -0.25
SLC12A4-204ENST00000541864 HMGB1P09429 215 aaKnown RBP13.51□□□□□ -0.25
SLC12A4-204ENST00000541864 MAST3O60307 1309 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 RAD21O60216 631 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 ZNF500O60304 480 aaPredicted RBP13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 PDILTQ8N807 584 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 NRDCO43847 1150 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 ZAP70P43403 619 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 TSGA10IPQ3SY00 556 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 ZMYM1Q5SVZ6 1142 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 OSBP2Q969R2 916 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 RAI14Q9P0K7 980 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 NR1I2O75469 434 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 MCM5P33992 734 aa13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 ZNF396Q96N95 335 aaPredicted RBP13.5□□□□□ -0.25
SLC12A4-204ENST00000541864 ADAMTSL3P82987 1691 aa13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.49□□□□□ -0.258e-7■■■■□ 25
SLC12A4-204ENST00000541864 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 CARD10Q9BWT7 1032 aa13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 TMX1Q9H3N1 280 aa13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 PRC1O43663 620 aa13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 SCARF1Q14162 830 aa13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 BCCIPQ9P287 314 aaKnown RBP eCLIP13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 CLIP2Q9UDT6 1046 aa13.49□□□□□ -0.25
SLC12A4-204ENST00000541864 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
SLC12A4-204ENST00000541864 ERICH2A1L162 156 aa13.48□□□□□ -0.25
SLC12A4-204ENST00000541864 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
SLC12A4-204ENST00000541864 PIGBQ92521 554 aa13.48□□□□□ -0.25
SLC12A4-204ENST00000541864 DSCC1Q9BVC3 393 aa13.48□□□□□ -0.25
SLC12A4-204ENST00000541864 NAPBQ9H115 298 aa13.48□□□□□ -0.25
SLC12A4-204ENST00000541864 ZNF335Q9H4Z2 1342 aaPredicted RBP13.48□□□□□ -0.25
SLC12A4-204ENST00000541864 HLFQ16534 295 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 FAM200AQ8TCP9 573 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 PGBD1Q96JS3 809 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 DDX19AQ9NUU7 478 aaKnown RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.47□□□□□ -0.252e-7■■□□□ 11.4
SLC12A4-204ENST00000541864 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 V9GYY5 206 aaPredicted RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 SCN11AQ9UI33 1791 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 EXOC5O00471 708 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 PFKFB2O60825 505 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 TPM4P67936 248 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 LRMPQ12912 555 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 CMTR1Q8N1G2 835 aaKnown RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 IFIT3O14879 490 aaKnown RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 ITGA6P23229 1130 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 RESTQ13127 1097 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 SPECC1Q5M775 1068 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 ALDH8A1Q9H2A2 487 aaPredicted RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
SLC12A4-204ENST00000541864 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 CHRM1P11229 460 aaPredicted RBP13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 PHKBQ93100 1093 aa13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 GREM2Q9H772 168 aa13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 MRVI1Q9Y6F6 885 aa13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 hCG_1642624A0A1W2PR95 340 aa13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 CCDC69A6NI79 296 aa13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 DHX16O60231 1041 aaKnown RBP13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 PTPN21Q16825 1174 aa13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 CPDO75976 1380 aa13.46□□□□□ -0.25
SLC12A4-204ENST00000541864 B4E1Z4 1266 aa13.46□□□□□ -0.26
SLC12A4-204ENST00000541864 AP5Z1O43299 807 aa13.46□□□□□ -0.26
SLC12A4-204ENST00000541864 PDIA3P30101 505 aaKnown RBP13.46□□□□□ -0.26
SLC12A4-204ENST00000541864 PUS7LQ9H0K6 701 aaKnown RBP13.46□□□□□ -0.26
SLC12A4-204ENST00000541864 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.26
SLC12A4-204ENST00000541864 FGAP02671 866 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 SAFBQ15424 915 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 SLC26A6Q9BXS9 759 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 CBX8Q9HC52 389 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 ELP1O95163 1332 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 CIAO1O76071 339 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 NRBP1Q9UHY1 535 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 SERPINC1P01008 464 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 CAMTA1Q9Y6Y1 1673 aa13.45□□□□□ -0.26
SLC12A4-204ENST00000541864 GPAA1O43292 621 aa13.44□□□□□ -0.26
SLC12A4-204ENST00000541864 RANBP6O60518 1105 aaKnown RBP13.44□□□□□ -0.26
SLC12A4-204ENST00000541864 CTDNEP1O95476 244 aa13.44□□□□□ -0.26
SLC12A4-204ENST00000541864 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
SLC12A4-204ENST00000541864 TMEM67Q5HYA8 995 aa13.44□□□□□ -0.26
SLC12A4-204ENST00000541864 KLHL10Q6JEL2 608 aa13.44□□□□□ -0.26
SLC12A4-204ENST00000541864 AOPEPQ8N6M6 819 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms