RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 F8W031 263 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 EN2P19622 333 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 LDLRAD1Q5T700 205 aa11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 TTLL11Q8NHH1 800 aa11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 DEFB129Q9H1M3 183 aa11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 PTPN22Q9Y2R2 807 aa11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 LAMB1P07942 1786 aa11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 ZNF804BA4D1E1 1349 aa11.02□□□□□ -0.65
CLSTN3-212ENST00000541770 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 IGF2BP3O00425 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 KLRK1P26718 216 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 NEXNQ0ZGT2 675 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 FLIIQ13045 1269 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 OTUD7BQ6GQQ9 843 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 MPHOSPH8Q99549 860 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 EFCC1Q9HA90 598 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 VEZTQ9HBM0 779 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 LEMD3Q9Y2U8 911 aa11.01□□□□□ -0.65
CLSTN3-212ENST00000541770 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
CLSTN3-212ENST00000541770 CACNA1FO60840 1977 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 OTOFQ9HC10 1997 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 MYO1BO43795 1136 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 ZBTB48P10074 688 aaPredicted RBP11□□□□□ -0.65
CLSTN3-212ENST00000541770 MMP14P50281 582 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 RBM5P52756 815 aaKnown RBP eCLIP11□□□□□ -0.65
CLSTN3-212ENST00000541770 CRHR2Q13324 411 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
CLSTN3-212ENST00000541770 G2E3Q7L622 706 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
CLSTN3-212ENST00000541770 SSH1Q8WYL5 1049 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 ANKRD2Q9GZV1 360 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 PCDHAC2Q9Y5I4 1007 aa11□□□□□ -0.65
CLSTN3-212ENST00000541770 A0A1B0GUL6 1792 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 PI4KAP2A4QPH2 592 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 IGKV5-2P06315 115 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 IREB2P48200 963 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 RARSP54136 660 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 SP3Q02447 781 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 SLC4A8Q2Y0W8 1093 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 SUPT20HL1Q3ZLR7 823 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 NBPF12Q5TAG4 269 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 KSR2Q6VAB6 950 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 PI4KAP1Q8N8J0 262 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 CD209Q9NNX6 404 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 JAG2Q9Y219 1238 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
CLSTN3-212ENST00000541770 ITGA6P23229 1130 aa10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 FXR1P51114 621 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 FKBP5Q13451 457 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 MAP3K11Q16584 847 aa10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 CFAP100Q494V2 611 aa10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 ZBED3Q96IU2 234 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 YTHDC1Q96MU7 727 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 ELP3Q9H9T3 547 aa10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 SMC4Q9NTJ3 1288 aa10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 PPP2R3BQ9Y5P8 575 aa10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 PTPRCP08575 1304 aa10.98□□□□□ -0.65
CLSTN3-212ENST00000541770 NEURL1BA8MQ27 555 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 SNAP23O00161 211 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 TAF5LO75529 589 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 GJA5P36382 358 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 CHRNDQ07001 517 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 SLC9C1Q4G0N8 1177 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 NBPF11Q86T75 865 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 ANKRD13AQ8IZ07 590 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 CERS5Q8N5B7 392 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 ARMC5Q96C12 935 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 COLQQ9Y215 455 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 CHMP3Q9Y3E7 222 aa10.97□□□□□ -0.65
CLSTN3-212ENST00000541770 ZSWIM8A7E2V4 1837 aa10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 USP2O75604 605 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 RASA3Q14644 834 aa10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 TAF1CQ15572 869 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 DNAAF4Q8WXU2 420 aa10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 OPTNQ96CV9 577 aa10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 PRMT6Q96LA8 375 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 PTPN18Q99952 460 aa10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 PTCH2Q9Y6C5 1203 aa10.96□□□□□ -0.65
CLSTN3-212ENST00000541770 AOX1Q06278 1338 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 KIF16BQ96L93 1317 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 ANKRD18BA2A2Z9 1011 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 H7C1W4 665 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 PLIN1O60240 522 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 CAP1Q01518 475 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 ARHGEF6Q15052 776 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 MTMR14Q8NCE2 650 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 ARHGAP45Q92619 1136 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 ZFYVE28Q9HCC9 887 aa10.95□□□□□ -0.66
CLSTN3-212ENST00000541770 CCL15-CCL14A0A0B4J2E2 113 aa10.94□□□□□ -0.66
CLSTN3-212ENST00000541770 UNCXA6NJT0 531 aa10.94□□□□□ -0.66
CLSTN3-212ENST00000541770 BCAR3O75815 825 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms