RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 PTPDC1A2A3K4 754 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 FGD1P98174 961 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 TTF1Q15361 905 aaPredicted RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 FAM173BQ6P4H8 233 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 MB21D2Q8IYB1 491 aaPredicted RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 ITGB4P16144 1822 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 ZMYM6O95789 1325 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 RRP9O43818 475 aaKnown RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 ADORA1P30542 326 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 IL6STP40189 918 aaPredicted RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 CTSWP56202 376 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 UBE3CQ15386 1083 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 ATP2B3Q16720 1220 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 GORABQ5T7V8 394 aa11.63□□□□□ -0.55
LMO3-227ENST00000541764 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
LMO3-227ENST00000541764 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
LMO3-227ENST00000541764 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 NWD2Q9ULI1 1742 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 ZNF335Q9H4Z2 1342 aaPredicted RBP11.62□□□□□ -0.55
LMO3-227ENST00000541764 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
LMO3-227ENST00000541764 CICQ96RK0 1608 aaPredicted RBP11.62□□□□□ -0.55
LMO3-227ENST00000541764 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 GOLGA6L6A8MZA4 724 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 PDE8AO60658 829 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 FGAP02671 866 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 ARID4AP29374 1257 aaPredicted RBP11.62□□□□□ -0.55
LMO3-227ENST00000541764 ADD2P35612 726 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 ALX1Q15699 326 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 TAF7LQ5H9L4 462 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 FAM89AQ96GI7 184 aa11.62□□□□□ -0.55
LMO3-227ENST00000541764 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 AP5Z1O43299 807 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 NR1I2O75469 434 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 UQCRFS1P1P0C7P4 283 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 ITGA6P23229 1130 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 ZAP70P43403 619 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
LMO3-227ENST00000541764 SCARF1Q14162 830 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 SASS6Q6UVJ0 657 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 ZNF34Q8IZ26 560 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 NCOA7Q8NI08 942 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
LMO3-227ENST00000541764 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 AKAP11Q9UKA4 1901 aa11.61□□□□□ -0.55
LMO3-227ENST00000541764 ARAP2Q8WZ64 1704 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
LMO3-227ENST00000541764 DTNBO60941 627 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 PDE8BO95263 885 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 FDPSP14324 419 aaKnown RBP11.6□□□□□ -0.55
LMO3-227ENST00000541764 FGFR2P21802 821 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 CDC25BP30305 580 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 MCAMP43121 646 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 HLFQ16534 295 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 METTL24Q5JXM2 366 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 LDHAL6AQ6ZMR3 332 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 ENGASEQ8NFI3 743 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 CBX8Q9HC52 389 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 MYH7P12883 1935 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 MROH5Q6ZUA9 1318 aa11.6□□□□□ -0.55
LMO3-227ENST00000541764 MYH3P11055 1940 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 IRS4O14654 1257 aaPredicted RBP11.59□□□□□ -0.55
LMO3-227ENST00000541764 GPAA1O43292 621 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 PRC1O43663 620 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 YEATS4O95619 227 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 NOLC1Q14978 699 aaKnown RBP eCLIP11.59□□□□□ -0.55
LMO3-227ENST00000541764 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 TTLL5Q6EMB2 1281 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 SARM1Q6SZW1 724 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 BRAPQ7Z569 592 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 ILDR1Q86SU0 546 aaPredicted RBP11.59□□□□□ -0.55
LMO3-227ENST00000541764 PLA2G4DQ86XP0 818 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
LMO3-227ENST00000541764 GREM2Q9H772 168 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 BTG4Q9NY30 223 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 AHDC1Q5TGY3 1603 aaPredicted RBP11.59□□□□□ -0.55
LMO3-227ENST00000541764 RREB1Q92766 1687 aa11.59□□□□□ -0.55
LMO3-227ENST00000541764 DYNC1I1O14576 645 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 ZNF213O14771 459 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 ANTXR2P58335 489 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 CCT2P78371 535 aaKnown RBP11.58□□□□□ -0.56
LMO3-227ENST00000541764 FAM160A1Q05DH4 1040 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms