RNA–Protein interactions for RNA: ENST00000541669.5

LDHC-207, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-207ENST00000541669 PDS5AQ29RF7 1337 aaKnown RBP11.85□□□□□ -0.51
LDHC-207ENST00000541669 IL1R1P14778 569 aa11.85□□□□□ -0.51
LDHC-207ENST00000541669 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
LDHC-207ENST00000541669 SCARF1Q14162 830 aa11.85□□□□□ -0.51
LDHC-207ENST00000541669 CD209Q9NNX6 404 aa11.85□□□□□ -0.51
LDHC-207ENST00000541669 DENND2AQ9ULE3 1009 aa11.85□□□□□ -0.51
LDHC-207ENST00000541669 NFKBIEO00221 500 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 PPIP5K2O43314 1243 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 SPATA5Q8NB90 893 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 TDRD7Q8NHU6 1098 aaKnown RBP11.84□□□□□ -0.51
LDHC-207ENST00000541669 DNAJC2Q99543 621 aaKnown RBP11.84□□□□□ -0.51
LDHC-207ENST00000541669 COL4A5P29400 1685 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 FRAT2O75474 233 aaPredicted RBP11.84□□□□□ -0.51
LDHC-207ENST00000541669 AOC3Q16853 763 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 ZNF277Q9NRM2 450 aaPredicted RBP11.84□□□□□ -0.51
LDHC-207ENST00000541669 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
LDHC-207ENST00000541669 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
LDHC-207ENST00000541669 TRIM6-TRIM34B2RNG4 842 aa11.83□□□□□ -0.52
LDHC-207ENST00000541669 G3V3G9 751 aa11.83□□□□□ -0.52
LDHC-207ENST00000541669 IARSP41252 1262 aaKnown RBP11.83□□□□□ -0.52
LDHC-207ENST00000541669 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
LDHC-207ENST00000541669 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
LDHC-207ENST00000541669 PI16Q6UXB8 463 aa11.83□□□□□ -0.52
LDHC-207ENST00000541669 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
LDHC-207ENST00000541669 EVI5LQ96CN4 794 aa11.83□□□□□ -0.52
LDHC-207ENST00000541669 NDUFB9Q9Y6M9 179 aa11.83□□□□□ -0.52
LDHC-207ENST00000541669 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
LDHC-207ENST00000541669 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
LDHC-207ENST00000541669 SDSP20132 328 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 ZAP70P43403 619 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 TTF1Q15361 905 aaPredicted RBP11.82□□□□□ -0.52
LDHC-207ENST00000541669 LARGE2Q8N3Y3 721 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 GOLIM4O00461 696 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 ECE2O60344 883 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 RILPL2Q969X0 211 aa11.82□□□□□ -0.52
LDHC-207ENST00000541669 CYP2E1P05181 493 aaPredicted RBP11.81□□□□□ -0.52
LDHC-207ENST00000541669 RASSF7Q02833 373 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
LDHC-207ENST00000541669 RFX7Q2KHR2 1363 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 FAM205AQ6ZU69 1335 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 SALL1Q9NSC2 1324 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 CDK5RAP2Q96SN8 1893 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 CHAF1AQ13111 956 aaPredicted RBP11.81□□□□□ -0.52
LDHC-207ENST00000541669 TICAM2Q86XR7 235 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 ZGPATQ8N5A5 531 aaKnown RBP11.81□□□□□ -0.52
LDHC-207ENST00000541669 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 WDR66Q8TBY9 1149 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
LDHC-207ENST00000541669 ECM29Q5VYK3 1845 aa11.8□□□□□ -0.52
LDHC-207ENST00000541669 GPR162Q16538 588 aa11.8□□□□□ -0.52
LDHC-207ENST00000541669 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
LDHC-207ENST00000541669 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
LDHC-207ENST00000541669 FSD1Q9BTV5 496 aa11.8□□□□□ -0.52
LDHC-207ENST00000541669 JDP2Q8WYK2 163 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 YDJCA8MPS7 323 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 IGSF3O75054 1194 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 LMNB1P20700 586 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 PRELPP51888 382 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 GTF2IP78347 998 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 LRRFIP1Q32MZ4 808 aaKnown RBP11.79□□□□□ -0.52
LDHC-207ENST00000541669 STRIP1Q5VSL9 837 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 TTLL5Q6EMB2 1281 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 PIH1D3Q9NQM4 214 aaKnown RBP11.79□□□□□ -0.52
LDHC-207ENST00000541669 ABCF2Q9UG63 623 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 JAG2Q9Y219 1238 aa11.79□□□□□ -0.52
LDHC-207ENST00000541669 HIP1O00291 1037 aa11.78□□□□□ -0.52
LDHC-207ENST00000541669 CDC45O75419 566 aa11.78□□□□□ -0.52
LDHC-207ENST00000541669 FKBP1AP62942 108 aaKnown RBP11.78□□□□□ -0.52
LDHC-207ENST00000541669 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
LDHC-207ENST00000541669 FOCADQ5VW36 1801 aa11.78□□□□□ -0.52
LDHC-207ENST00000541669 ADAMTSL1Q8N6G6 1762 aa11.78□□□□□ -0.52
LDHC-207ENST00000541669 USP17L3A6NCW0 530 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 USP17L4A6NCW7 530 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.52
LDHC-207ENST00000541669 MAP3K12Q12852 859 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 SPTY2D1Q68D10 685 aaPredicted RBP11.77□□□□□ -0.52
LDHC-207ENST00000541669 ZSCAN25Q6NSZ9 544 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 FBXW7Q969H0 707 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 LRP2BPQ9P2M1 347 aa11.77□□□□□ -0.52
LDHC-207ENST00000541669 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
LDHC-207ENST00000541669 DACT2Q5SW24 774 aa11.77□□□□□ -0.53
LDHC-207ENST00000541669 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
LDHC-207ENST00000541669 KCNQ5Q9NR82 932 aa11.77□□□□□ -0.53
LDHC-207ENST00000541669 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
LDHC-207ENST00000541669 LDHBP07195 334 aaKnown RBP11.76□□□□□ -0.53
LDHC-207ENST00000541669 CHMLP26374 656 aa11.76□□□□□ -0.53
LDHC-207ENST00000541669 TMED8Q6PL24 325 aaPredicted RBP11.76□□□□□ -0.53
LDHC-207ENST00000541669 DIAPH3Q9NSV4 1193 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms