RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 MVPQ14764 893 aaKnown RBP16.28■□□□□ 0.2
LTBR-208ENST00000541005 ATP2B3Q16720 1220 aa16.28■□□□□ 0.2
LTBR-208ENST00000541005 CDC37L1Q7L3B6 337 aa16.28■□□□□ 0.2
LTBR-208ENST00000541005 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
LTBR-208ENST00000541005 ATP8B2P98198 1209 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 PDE3AQ14432 1141 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 RBM26Q5T8P6 1007 aaKnown RBP16.27■□□□□ 0.2
LTBR-208ENST00000541005 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 KIAA0825Q8IV33 1275 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 KLRG1Q96E93 195 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 ZBED3Q96IU2 234 aaPredicted RBP16.27■□□□□ 0.2
LTBR-208ENST00000541005 GLIS2Q9BZE0 524 aaPredicted RBP16.27■□□□□ 0.2
LTBR-208ENST00000541005 GGA3Q9NZ52 723 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
LTBR-208ENST00000541005 COL1A1P02452 1464 aaPredicted RBP16.27■□□□□ 0.19
LTBR-208ENST00000541005 AKAP11Q9UKA4 1901 aa16.27■□□□□ 0.19
LTBR-208ENST00000541005 TRAF5O00463 557 aa16.26■□□□□ 0.19
LTBR-208ENST00000541005 MFSD14BQ5SR56 506 aa16.26■□□□□ 0.19
LTBR-208ENST00000541005 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
LTBR-208ENST00000541005 MTMR14Q8NCE2 650 aa16.26■□□□□ 0.19
LTBR-208ENST00000541005 C1orf115Q9H7X2 142 aa16.26■□□□□ 0.19
LTBR-208ENST00000541005 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
LTBR-208ENST00000541005 WNT10BO00744 389 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 BCAMP50895 628 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 SCARF1Q14162 830 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 CEP85Q6P2H3 762 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 KRT26Q7Z3Y9 468 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 TBC1D22AQ8WUA7 517 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 DCPSQ96C86 337 aaKnown RBP16.25■□□□□ 0.19
LTBR-208ENST00000541005 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
LTBR-208ENST00000541005 PAPPA2Q9BXP8 1791 aa16.24■□□□□ 0.19
LTBR-208ENST00000541005 FMR1Q06787 632 aaKnown RBP eCLIP16.24■□□□□ 0.19
LTBR-208ENST00000541005 CST9Q5W186 159 aa16.24■□□□□ 0.19
LTBR-208ENST00000541005 JAG2Q9Y219 1238 aa16.24■□□□□ 0.19
LTBR-208ENST00000541005 AKAP2Q9Y2D5 859 aa16.24■□□□□ 0.19
LTBR-208ENST00000541005 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
LTBR-208ENST00000541005 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
LTBR-208ENST00000541005 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 SEMA3EO15041 775 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 TFCP2Q12800 502 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 NBPF9Q3BBW0 867 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 ANGEL2Q5VTE6 544 aaKnown RBP16.23■□□□□ 0.19
LTBR-208ENST00000541005 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 SULF1Q8IWU6 871 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 JMYQ8N9B5 988 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
LTBR-208ENST00000541005 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 SUGT1Q9Y2Z0 365 aa16.23■□□□□ 0.19
LTBR-208ENST00000541005 A0A1B0GUL7 405 aa16.22■□□□□ 0.19
LTBR-208ENST00000541005 ADM5C9JUS6 153 aa16.22■□□□□ 0.19
LTBR-208ENST00000541005 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
LTBR-208ENST00000541005 IQSEC3Q9UPP2 1182 aaPredicted RBP16.22■□□□□ 0.19
LTBR-208ENST00000541005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.22■□□□□ 0.19
LTBR-208ENST00000541005 MYO5AQ9Y4I1 1855 aaKnown RBP16.22■□□□□ 0.19
LTBR-208ENST00000541005 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
LTBR-208ENST00000541005 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 FRAT2O75474 233 aaPredicted RBP16.21■□□□□ 0.19
LTBR-208ENST00000541005 CELF2O95319 508 aaKnown RBP16.21■□□□□ 0.19
LTBR-208ENST00000541005 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 ADORA1P30542 326 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 PHKA1P46020 1223 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 DLGAP5Q15398 846 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 C20orf194Q5TEA3 1177 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
LTBR-208ENST00000541005 GPR108Q9NPR9 543 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
LTBR-208ENST00000541005 SERPINA10Q9UK55 444 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 TLL2Q9Y6L7 1015 aa16.21■□□□□ 0.19
LTBR-208ENST00000541005 MAST2Q6P0Q8 1798 aa16.21■□□□□ 0.18
LTBR-208ENST00000541005 SALL1Q9NSC2 1324 aa16.2■□□□□ 0.18
LTBR-208ENST00000541005 HDLBPQ00341 1268 aaKnown RBP16.2■□□□□ 0.18
LTBR-208ENST00000541005 CHAF1AQ13111 956 aaPredicted RBP16.2■□□□□ 0.18
LTBR-208ENST00000541005 CFAP100Q494V2 611 aa16.2■□□□□ 0.18
LTBR-208ENST00000541005 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
LTBR-208ENST00000541005 APOBEC3FQ8IUX4 373 aaKnown RBP16.2■□□□□ 0.18
LTBR-208ENST00000541005 WDR66Q8TBY9 1149 aa16.2■□□□□ 0.18
LTBR-208ENST00000541005 XAGE2Q96GT9 111 aa16.2■□□□□ 0.18
LTBR-208ENST00000541005 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
LTBR-208ENST00000541005 MAST3O60307 1309 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 LAMB1P07942 1786 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 F8W031 263 aaPredicted RBP16.19■□□□□ 0.18
LTBR-208ENST00000541005 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
LTBR-208ENST00000541005 TIMM10P62072 90 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 GRIK5Q16478 980 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
LTBR-208ENST00000541005 CDCA5Q96FF9 252 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 HHIPL1Q96JK4 782 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 MRIQ9BWK5 157 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 MKRN1Q9UHC7 482 aaKnown RBP16.19■□□□□ 0.18
LTBR-208ENST00000541005 DENND2AQ9ULE3 1009 aa16.19■□□□□ 0.18
LTBR-208ENST00000541005 ABT1Q9ULW3 272 aaKnown RBP16.19■□□□□ 0.18
LTBR-208ENST00000541005 DLK2Q6UY11 383 aa16.18■□□□□ 0.18
LTBR-208ENST00000541005 SAPCD2Q86UD0 394 aa16.18■□□□□ 0.18
LTBR-208ENST00000541005 PCDHAC2Q9Y5I4 1007 aa16.18■□□□□ 0.18
LTBR-208ENST00000541005 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
LTBR-208ENST00000541005 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
LTBR-208ENST00000541005 MYO1BO43795 1136 aa16.17■□□□□ 0.18
LTBR-208ENST00000541005 CRKP46108 304 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms