RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 A0A1B0GUL6 1792 aa18.27■□□□□ 0.52
MSRB3-209ENST00000540804 GYG1P46976 350 aa18.27■□□□□ 0.52
MSRB3-209ENST00000540804 ZNF804AQ7Z570 1209 aa18.27■□□□□ 0.52
MSRB3-209ENST00000540804 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.52
MSRB3-209ENST00000540804 CSRNP1Q96S65 589 aa18.26■□□□□ 0.51
MSRB3-209ENST00000540804 RIPOR2Q9Y4F9 1068 aa18.26■□□□□ 0.51
MSRB3-209ENST00000540804 PTPRCP08575 1304 aa18.25■□□□□ 0.51
MSRB3-209ENST00000540804 CA12O43570 354 aa18.25■□□□□ 0.51
MSRB3-209ENST00000540804 TRPA1O75762 1119 aa18.25■□□□□ 0.51
MSRB3-209ENST00000540804 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
MSRB3-209ENST00000540804 DLGAP5Q15398 846 aa18.25■□□□□ 0.51
MSRB3-209ENST00000540804 RABL6Q3YEC7 729 aaPredicted RBP18.25■□□□□ 0.51
MSRB3-209ENST00000540804 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
MSRB3-209ENST00000540804 RNF186Q9NXI6 227 aa18.25■□□□□ 0.51
MSRB3-209ENST00000540804 CLRN2A0PK11 232 aa18.24■□□□□ 0.51
MSRB3-209ENST00000540804 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
MSRB3-209ENST00000540804 CFAP100Q494V2 611 aa18.24■□□□□ 0.51
MSRB3-209ENST00000540804 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
MSRB3-209ENST00000540804 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
MSRB3-209ENST00000540804 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
MSRB3-209ENST00000540804 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.24■□□□□ 0.51
MSRB3-209ENST00000540804 IQSEC3Q9UPP2 1182 aaPredicted RBP18.24■□□□□ 0.51
MSRB3-209ENST00000540804 PAPPA2Q9BXP8 1791 aa18.23■□□□□ 0.51
MSRB3-209ENST00000540804 FKBP1BP68106 108 aa18.23■□□□□ 0.51
MSRB3-209ENST00000540804 TDRD7Q8NHU6 1098 aaKnown RBP18.23■□□□□ 0.51
MSRB3-209ENST00000540804 PRMT6Q96LA8 375 aaPredicted RBP18.23■□□□□ 0.51
MSRB3-209ENST00000540804 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
MSRB3-209ENST00000540804 UBE4AQ14139 1066 aa18.22■□□□□ 0.51
MSRB3-209ENST00000540804 GRIK5Q16478 980 aa18.22■□□□□ 0.51
MSRB3-209ENST00000540804 APOBEC3FQ8IUX4 373 aaKnown RBP18.22■□□□□ 0.51
MSRB3-209ENST00000540804 PTPN12Q05209 780 aaKnown RBP18.21■□□□□ 0.51
MSRB3-209ENST00000540804 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
MSRB3-209ENST00000540804 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
MSRB3-209ENST00000540804 MCOLN1Q9GZU1 580 aa18.21■□□□□ 0.51
MSRB3-209ENST00000540804 DEFB129Q9H1M3 183 aa18.21■□□□□ 0.51
MSRB3-209ENST00000540804 NOB1Q9ULX3 412 aaKnown RBP18.21■□□□□ 0.51
MSRB3-209ENST00000540804 FAM205AQ6ZU69 1335 aa18.21■□□□□ 0.51
MSRB3-209ENST00000540804 SPDYE2BA6NHP3 402 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 CCDC85CA6NKD9 419 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 SPDYE6P0CI01 402 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 MMP14P50281 582 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 RBM5P52756 815 aaKnown RBP eCLIP18.2■□□□□ 0.5
MSRB3-209ENST00000540804 FKBP1AP62942 108 aaKnown RBP18.2■□□□□ 0.5
MSRB3-209ENST00000540804 MFSD14BQ5SR56 506 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 MTMR14Q8NCE2 650 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 VEZTQ9HBM0 779 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 MROH5Q6ZUA9 1318 aa18.2■□□□□ 0.5
MSRB3-209ENST00000540804 SSC5DA1L4H1 1573 aa18.19■□□□□ 0.5
MSRB3-209ENST00000540804 NF2P35240 595 aa18.19■□□□□ 0.5
MSRB3-209ENST00000540804 RFX5P48382 616 aaPredicted RBP18.19■□□□□ 0.5
MSRB3-209ENST00000540804 CHAF1AQ13111 956 aaPredicted RBP18.19■□□□□ 0.5
MSRB3-209ENST00000540804 DGKZQ13574 1117 aa18.19■□□□□ 0.5
MSRB3-209ENST00000540804 SAGE1Q9NXZ1 904 aa18.19■□□□□ 0.5
MSRB3-209ENST00000540804 ANGEL1Q9UNK9 670 aaKnown RBP18.19■□□□□ 0.5
MSRB3-209ENST00000540804 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
MSRB3-209ENST00000540804 PDE8BO95263 885 aa18.18■□□□□ 0.5
MSRB3-209ENST00000540804 BCAMP50895 628 aa18.18■□□□□ 0.5
MSRB3-209ENST00000540804 FBXO33Q7Z6M2 555 aa18.18■□□□□ 0.5
MSRB3-209ENST00000540804 TTF2Q9UNY4 1162 aaKnown RBP18.18■□□□□ 0.5
MSRB3-209ENST00000540804 NBPF12Q5TAG4 269 aaPredicted RBP18.17■□□□□ 0.5
MSRB3-209ENST00000540804 ARMC9Q7Z3E5 817 aa18.17■□□□□ 0.5
MSRB3-209ENST00000540804 TDRD3Q9H7E2 651 aaKnown RBP18.17■□□□□ 0.5
MSRB3-209ENST00000540804 TBC1D8O95759 1140 aa18.16■□□□□ 0.5
MSRB3-209ENST00000540804 LDLRAD1Q5T700 205 aa18.16■□□□□ 0.5
MSRB3-209ENST00000540804 CDAN1Q8IWY9 1227 aa18.16■□□□□ 0.5
MSRB3-209ENST00000540804 CLMNQ96JQ2 1002 aa18.16■□□□□ 0.5
MSRB3-209ENST00000540804 CASP8AP2Q9UKL3 1982 aa18.15■□□□□ 0.5
MSRB3-209ENST00000540804 MYO1BO43795 1136 aa18.15■□□□□ 0.5
MSRB3-209ENST00000540804 FGFR2P21802 821 aa18.15■□□□□ 0.5
MSRB3-209ENST00000540804 RASA3Q14644 834 aa18.15■□□□□ 0.5
MSRB3-209ENST00000540804 VPS37DQ86XT2 251 aa18.15■□□□□ 0.5
MSRB3-209ENST00000540804 ZNF70Q9UC06 446 aaPredicted RBP18.15■□□□□ 0.5
MSRB3-209ENST00000540804 EYA2O00167 538 aa18.14■□□□□ 0.49
MSRB3-209ENST00000540804 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
MSRB3-209ENST00000540804 CRKP46108 304 aa18.14■□□□□ 0.49
MSRB3-209ENST00000540804 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.49
MSRB3-209ENST00000540804 ATG9AQ7Z3C6 839 aa18.14■□□□□ 0.49
MSRB3-209ENST00000540804 SIL1Q9H173 461 aa18.14■□□□□ 0.49
MSRB3-209ENST00000540804 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
MSRB3-209ENST00000540804 COL1A1P02452 1464 aaPredicted RBP18.14■□□□□ 0.49
MSRB3-209ENST00000540804 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
MSRB3-209ENST00000540804 UBTFL1P0CB47 393 aaPredicted RBP18.13■□□□□ 0.49
MSRB3-209ENST00000540804 SPDYE2Q495Y8 402 aa18.13■□□□□ 0.49
MSRB3-209ENST00000540804 CAVIN4Q5BKX8 364 aa18.13■□□□□ 0.49
MSRB3-209ENST00000540804 SPRYD7Q5W111 196 aa18.13■□□□□ 0.49
MSRB3-209ENST00000540804 DZIP1LQ8IYY4 767 aaKnown RBP18.13■□□□□ 0.49
MSRB3-209ENST00000540804 R3HDMLQ9H3Y0 253 aa18.13■□□□□ 0.49
MSRB3-209ENST00000540804 LRRFIP2Q9Y608 721 aaKnown RBP18.13■□□□□ 0.49
MSRB3-209ENST00000540804 USP2O75604 605 aaPredicted RBP18.12■□□□□ 0.49
MSRB3-209ENST00000540804 TM4SF4P48230 202 aa18.12■□□□□ 0.49
MSRB3-209ENST00000540804 CACNB3P54284 484 aa18.12■□□□□ 0.49
MSRB3-209ENST00000540804 PUM3Q15397 648 aaKnown RBP18.12■□□□□ 0.49
MSRB3-209ENST00000540804 MEIS3Q99687 375 aa18.12■□□□□ 0.49
MSRB3-209ENST00000540804 SERPINA10Q9UK55 444 aa18.12■□□□□ 0.49
MSRB3-209ENST00000540804 PA2G4Q9UQ80 394 aaKnown RBP18.12■□□□□ 0.49
MSRB3-209ENST00000540804 PPP2R3BQ9Y5P8 575 aa18.12■□□□□ 0.49
MSRB3-209ENST00000540804 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
MSRB3-209ENST00000540804 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
MSRB3-209ENST00000540804 SLC10A4Q96EP9 437 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms