RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 SLC51AQ86UW1 340 aa11.43□□□□□ -0.58
PAAF1-209ENST00000540659 OSBP2Q969R2 916 aa11.43□□□□□ -0.58
PAAF1-209ENST00000540659 CHMP5Q9NZZ3 219 aa11.43□□□□□ -0.58
PAAF1-209ENST00000540659 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
PAAF1-209ENST00000540659 GRAPQ13588 217 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 UBE4AQ14139 1066 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 CAVIN4Q5BKX8 364 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 SLC9C2Q5TAH2 1124 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 VPS37DQ86XT2 251 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
PAAF1-209ENST00000540659 APPBP2Q92624 585 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 IL17RAQ96F46 866 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
PAAF1-209ENST00000540659 ANKRD2Q9GZV1 360 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 CD2APQ9Y5K6 639 aa11.42□□□□□ -0.58
PAAF1-209ENST00000540659 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
PAAF1-209ENST00000540659 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 ZNF532Q9HCE3 1301 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 COL11A2P13942 1736 aaPredicted RBP11.41□□□□□ -0.58
PAAF1-209ENST00000540659 KLRK1P26718 216 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 ADD2P35612 726 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 MCM2P49736 904 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 AK2P54819 239 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 NFKBIBQ15653 356 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 IL27Q8NEV9 243 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 KCNB2Q92953 911 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
PAAF1-209ENST00000540659 PUS7LQ9H0K6 701 aaKnown RBP11.41□□□□□ -0.58
PAAF1-209ENST00000540659 TMX4Q9H1E5 349 aaPredicted RBP11.41□□□□□ -0.58
PAAF1-209ENST00000540659 PDRG1Q9NUG6 133 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 CYP46A1Q9Y6A2 500 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 TAF6LQ9Y6J9 622 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 UTRNP46939 3433 aa11.41□□□□□ -0.58
PAAF1-209ENST00000540659 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
PAAF1-209ENST00000540659 HSPD1P10809 573 aaKnown RBP11.4□□□□□ -0.58
PAAF1-209ENST00000540659 PSMA5P28066 241 aa11.4□□□□□ -0.58
PAAF1-209ENST00000540659 RUFY3Q7L099 469 aa11.4□□□□□ -0.58
PAAF1-209ENST00000540659 MAGEB6Q8N7X4 407 aa11.4□□□□□ -0.58
PAAF1-209ENST00000540659 TMX3Q96JJ7 454 aa11.4□□□□□ -0.58
PAAF1-209ENST00000540659 DSCC1Q9BVC3 393 aa11.4□□□□□ -0.58
PAAF1-209ENST00000540659 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
PAAF1-209ENST00000540659 ANKIB1Q9P2G1 1089 aa11.4□□□□□ -0.58
PAAF1-209ENST00000540659 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.59
PAAF1-209ENST00000540659 ZNF804BA4D1E1 1349 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 COL1A1P02452 1464 aaPredicted RBP11.39□□□□□ -0.59
PAAF1-209ENST00000540659 A0A0G2JLW4 131 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 GPAA1O43292 621 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 CYP21A2P08686 494 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 PDE6AP16499 860 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 MAP3K12Q12852 859 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 BLOC1S2Q6QNY1 142 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 ZGPATQ8N5A5 531 aaKnown RBP11.39□□□□□ -0.59
PAAF1-209ENST00000540659 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
PAAF1-209ENST00000540659 TCEANC2Q96MN5 208 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 TTC14Q96N46 770 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 LRP2BPQ9P2M1 347 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 ABCF2Q9UG63 623 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 CHD4Q14839 1912 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 MAST2Q6P0Q8 1798 aa11.39□□□□□ -0.59
PAAF1-209ENST00000540659 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 LRRC37AA6NMS7 1700 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 DDIT3P35638 169 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 GPSM2P81274 684 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 CHAF1AQ13111 956 aaPredicted RBP11.38□□□□□ -0.59
PAAF1-209ENST00000540659 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 TTLL5Q6EMB2 1281 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 GPR101Q96P66 508 aaPredicted RBP11.38□□□□□ -0.59
PAAF1-209ENST00000540659 TM6SF1Q9BZW5 370 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 RAI14Q9P0K7 980 aa11.38□□□□□ -0.59
PAAF1-209ENST00000540659 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 TCRBV5S4A2TA0A5A2 114 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 APPP05067 770 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 RPS6KB1P23443 525 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 HIBADHP31937 336 aaKnown RBP11.37□□□□□ -0.59
PAAF1-209ENST00000540659 COL9A3Q14050 684 aaPredicted RBP11.37□□□□□ -0.59
PAAF1-209ENST00000540659 KRT32Q14532 448 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 CRY2Q49AN0 593 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 TXNRD3Q86VQ6 643 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 NEK1Q96PY6 1258 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 DENND2AQ9ULE3 1009 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
PAAF1-209ENST00000540659 XDHP47989 1333 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
PAAF1-209ENST00000540659 IGSF3O75054 1194 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 MBD4O95243 580 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 LARGE1O95461 756 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 YBX3P16989 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
PAAF1-209ENST00000540659 PDE6BP35913 854 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 HAND2P61296 217 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 FBXO33Q7Z6M2 555 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
PAAF1-209ENST00000540659 NSFL1CQ9UNZ2 370 aaKnown RBP11.36□□□□□ -0.59
PAAF1-209ENST00000540659 LIMCH1Q9UPQ0 1083 aa11.36□□□□□ -0.59
PAAF1-209ENST00000540659 LEMD3Q9Y2U8 911 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms