RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
LMO3-223ENST00000540590 RILPL2Q969X0 211 aa15.2■□□□□ 0.02
LMO3-223ENST00000540590 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
LMO3-223ENST00000540590 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
LMO3-223ENST00000540590 FHDC1Q9C0D6 1143 aaPredicted RBP15.2■□□□□ 0.02
LMO3-223ENST00000540590 SNRKQ9NRH2 765 aa15.2■□□□□ 0.02
LMO3-223ENST00000540590 WWC3Q9ULE0 1092 aa15.2■□□□□ 0.02
LMO3-223ENST00000540590 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
LMO3-223ENST00000540590 ZAP70P43403 619 aa15.19■□□□□ 0.02
LMO3-223ENST00000540590 RASGRF1Q13972 1273 aa15.19■□□□□ 0.02
LMO3-223ENST00000540590 C8orf34Q49A92 452 aa15.19■□□□□ 0.02
LMO3-223ENST00000540590 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
LMO3-223ENST00000540590 PI16Q6UXB8 463 aa15.19■□□□□ 0.02
LMO3-223ENST00000540590 VPS33BQ9H267 617 aa15.19■□□□□ 0.02
LMO3-223ENST00000540590 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
LMO3-223ENST00000540590 COL1A1P02452 1464 aaPredicted RBP15.19■□□□□ 0.02
LMO3-223ENST00000540590 SEMA3EO15041 775 aa15.18■□□□□ 0.02
LMO3-223ENST00000540590 ZNF804AQ7Z570 1209 aa15.18■□□□□ 0.02
LMO3-223ENST00000540590 VPS37DQ86XT2 251 aa15.18■□□□□ 0.02
LMO3-223ENST00000540590 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
LMO3-223ENST00000540590 EVI5LQ96CN4 794 aa15.18■□□□□ 0.02
LMO3-223ENST00000540590 RTFDC1Q9BY42 306 aaPredicted RBP15.18■□□□□ 0.02
LMO3-223ENST00000540590 GNL3LQ9NVN8 582 aaKnown RBP15.18■□□□□ 0.02
LMO3-223ENST00000540590 PAG1Q9NWQ8 432 aa15.18■□□□□ 0.02
LMO3-223ENST00000540590 IQSEC3Q9UPP2 1182 aaPredicted RBP15.18■□□□□ 0.02
LMO3-223ENST00000540590 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
LMO3-223ENST00000540590 GOLIM4O00461 696 aa15.17■□□□□ 0.02
LMO3-223ENST00000540590 CDC45O75419 566 aa15.17■□□□□ 0.02
LMO3-223ENST00000540590 FKBP4Q02790 459 aaKnown RBP eCLIP15.17■□□□□ 0.02
LMO3-223ENST00000540590 TMED8Q6PL24 325 aaPredicted RBP15.17■□□□□ 0.02
LMO3-223ENST00000540590 RTKN2Q8IZC4 609 aa15.17■□□□□ 0.02
LMO3-223ENST00000540590 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
LMO3-223ENST00000540590 EYA3Q99504 573 aa15.17■□□□□ 0.02
LMO3-223ENST00000540590 ANTXR1Q9H6X2 564 aa15.17■□□□□ 0.02
LMO3-223ENST00000540590 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
LMO3-223ENST00000540590 RIMBP2O15034 1052 aa15.16■□□□□ 0.02
LMO3-223ENST00000540590 WASHC4Q2M389 1173 aa15.16■□□□□ 0.02
LMO3-223ENST00000540590 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
LMO3-223ENST00000540590 TDRD7Q8NHU6 1098 aaKnown RBP15.16■□□□□ 0.02
LMO3-223ENST00000540590 ZC3H12CQ9C0D7 883 aaKnown RBP15.16■□□□□ 0.02
LMO3-223ENST00000540590 ZNF646O15015 1829 aaPredicted RBP15.15■□□□□ 0.02
LMO3-223ENST00000540590 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 CCDC88AQ3V6T2 1871 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
LMO3-223ENST00000540590 LRRFIP1Q32MZ4 808 aaKnown RBP15.15■□□□□ 0.02
LMO3-223ENST00000540590 KBTBD3Q8NAB2 608 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 PSMD1Q99460 953 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 SYT17Q9BSW7 474 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 BACH2Q9BYV9 841 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 CD209Q9NNX6 404 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 PSME4Q14997 1843 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
LMO3-223ENST00000540590 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
LMO3-223ENST00000540590 IL1R1P14778 569 aa15.14■□□□□ 0.01
LMO3-223ENST00000540590 CHMLP26374 656 aa15.14■□□□□ 0.01
LMO3-223ENST00000540590 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
LMO3-223ENST00000540590 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
LMO3-223ENST00000540590 MAST2Q6P0Q8 1798 aa15.13■□□□□ 0.01
LMO3-223ENST00000540590 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
LMO3-223ENST00000540590 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
LMO3-223ENST00000540590 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
LMO3-223ENST00000540590 AOC3Q16853 763 aa15.13■□□□□ 0.01
LMO3-223ENST00000540590 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
LMO3-223ENST00000540590 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
LMO3-223ENST00000540590 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
LMO3-223ENST00000540590 COL4A5P29400 1685 aa15.12■□□□□ 0.01
LMO3-223ENST00000540590 LTBP3Q9NS15 1303 aa15.12■□□□□ 0.01
LMO3-223ENST00000540590 G3V3G9 751 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 NFKBIEO00221 500 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 HIP1O00291 1037 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 PPIP5K2O43314 1243 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 GABBR2O75899 941 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 DCAF8Q5TAQ9 597 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
LMO3-223ENST00000540590 DIAPH3Q9NSV4 1193 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 JAG2Q9Y219 1238 aa15.11■□□□□ 0.01
LMO3-223ENST00000540590 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
LMO3-223ENST00000540590 SEC24BO95487 1268 aa15.1■□□□□ 0.01
LMO3-223ENST00000540590 CHGBP05060 677 aa15.1■□□□□ 0.01
LMO3-223ENST00000540590 NMIQ13287 307 aaPredicted RBP15.1■□□□□ 0.01
LMO3-223ENST00000540590 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
LMO3-223ENST00000540590 ESYT1Q9BSJ8 1104 aa15.1■□□□□ 0.01
LMO3-223ENST00000540590 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
LMO3-223ENST00000540590 FAM205AQ6ZU69 1335 aa15.1■□□□□ 0.01
LMO3-223ENST00000540590 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
LMO3-223ENST00000540590 SBF1O95248 1867 aa15.1■□□□□ 0.01
LMO3-223ENST00000540590 DICER1Q9UPY3 1922 aaKnown RBP15.09■□□□□ 0.01
LMO3-223ENST00000540590 RNF113AO15541 343 aaKnown RBP15.09■□□□□ 0.01
LMO3-223ENST00000540590 ECE2O60344 883 aa15.09■□□□□ 0.01
LMO3-223ENST00000540590 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
LMO3-223ENST00000540590 WDR66Q8TBY9 1149 aa15.09■□□□□ 0.01
LMO3-223ENST00000540590 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
LMO3-223ENST00000540590 IL25Q9H293 177 aa15.09■□□□□ 0.01
LMO3-223ENST00000540590 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
LMO3-223ENST00000540590 MYH2Q9UKX2 1941 aa15.08■□□□□ 0
LMO3-223ENST00000540590 A0A0D9SFI3 127 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms