RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 GREM2Q9H772 168 aa16.49■□□□□ 0.23
INO80E-203ENST00000540562 GPAA1O43292 621 aa16.49■□□□□ 0.23
INO80E-203ENST00000540562 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
INO80E-203ENST00000540562 B4E1Z4 1266 aa16.49■□□□□ 0.23
INO80E-203ENST00000540562 SNW1Q13573 536 aaKnown RBP16.49■□□□□ 0.23
INO80E-203ENST00000540562 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
INO80E-203ENST00000540562 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
INO80E-203ENST00000540562 SKILP12757 684 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 TERF1P54274 439 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
INO80E-203ENST00000540562 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
INO80E-203ENST00000540562 PDCL2Q8N4E4 241 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 ZSCAN16Q9H4T2 348 aaPredicted RBP16.48■□□□□ 0.23
INO80E-203ENST00000540562 SPTLC3Q9NUV7 552 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 FOXP2O15409 715 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 EXOSC10Q01780 885 aaKnown RBP16.48■□□□□ 0.23
INO80E-203ENST00000540562 TSGA10IPQ3SY00 556 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
INO80E-203ENST00000540562 CLIC6Q96NY7 704 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 CHD2O14647 1828 aaKnown RBP16.48■□□□□ 0.23
INO80E-203ENST00000540562 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
INO80E-203ENST00000540562 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 CCDC69A6NI79 296 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 ZNF213O14771 459 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 PRIMPOLQ96LW4 560 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 SH3TC1Q8TE82 1336 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 IQCB1Q15051 598 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 STX1AQ16623 288 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 SLC4A8Q2Y0W8 1093 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 PLA2G4DQ86XP0 818 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
INO80E-203ENST00000540562 ITGA6P23229 1130 aa16.46■□□□□ 0.23
INO80E-203ENST00000540562 MCAMP43121 646 aa16.46■□□□□ 0.23
INO80E-203ENST00000540562 hCG_1642624A0A1W2PR95 340 aa16.46■□□□□ 0.23
INO80E-203ENST00000540562 ANTXR2P58335 489 aa16.46■□□□□ 0.23
INO80E-203ENST00000540562 CTDSPL2Q05D32 466 aa16.46■□□□□ 0.23
INO80E-203ENST00000540562 TMC6Q7Z403 805 aa16.46■□□□□ 0.23
INO80E-203ENST00000540562 TDRD7Q8NHU6 1098 aaKnown RBP16.46■□□□□ 0.23
INO80E-203ENST00000540562 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
INO80E-203ENST00000540562 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
INO80E-203ENST00000540562 MRPS27Q92552 414 aaKnown RBP16.45■□□□□ 0.22
INO80E-203ENST00000540562 DSCC1Q9BVC3 393 aa16.45■□□□□ 0.22
INO80E-203ENST00000540562 IFNKQ9P0W0 207 aa16.45■□□□□ 0.22
INO80E-203ENST00000540562 HMGB1P09429 215 aaKnown RBP16.45■□□□□ 0.22
INO80E-203ENST00000540562 ATP1A3P13637 1013 aa16.45■□□□□ 0.22
INO80E-203ENST00000540562 PHKA1P46020 1223 aa16.45■□□□□ 0.22
INO80E-203ENST00000540562 DHX40Q8IX18 779 aaKnown RBP16.45■□□□□ 0.22
INO80E-203ENST00000540562 RCOR1Q9UKL0 485 aa16.45■□□□□ 0.22
INO80E-203ENST00000540562 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
INO80E-203ENST00000540562 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 TBC1D10CQ8IV04 446 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
INO80E-203ENST00000540562 N4BP2Q86UW6 1770 aaPredicted RBP16.44■□□□□ 0.22
INO80E-203ENST00000540562 LRRC8AQ8IWT6 810 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 CEP57L1Q8IYX8 460 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 PDILTQ8N807 584 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 CCDC191Q8NCU4 936 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 KIF6Q6ZMV9 814 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
INO80E-203ENST00000540562 CRYBG1Q9Y4K1 1723 aa16.44■□□□□ 0.22
INO80E-203ENST00000540562 AFDNP55196 1824 aaKnown RBP16.43■□□□□ 0.22
INO80E-203ENST00000540562 SPTLC2O15270 562 aa16.43■□□□□ 0.22
INO80E-203ENST00000540562 TRDNQ13061 729 aa16.43■□□□□ 0.22
INO80E-203ENST00000540562 CCDC112Q8NEF3 446 aa16.43■□□□□ 0.22
INO80E-203ENST00000540562 IL2RBP14784 551 aa16.43■□□□□ 0.22
INO80E-203ENST00000540562 NAA16Q6N069 864 aaPredicted RBP16.43■□□□□ 0.22
INO80E-203ENST00000540562 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
INO80E-203ENST00000540562 XPO4Q9C0E2 1151 aaKnown RBP16.43■□□□□ 0.22
INO80E-203ENST00000540562 HPS5Q9UPZ3 1129 aa16.43■□□□□ 0.22
INO80E-203ENST00000540562 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
INO80E-203ENST00000540562 PRKAB2O43741 272 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
INO80E-203ENST00000540562 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
INO80E-203ENST00000540562 TCIRG1Q13488 830 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 PNOCQ13519 176 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 CEP135Q66GS9 1140 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 PIGBQ92521 554 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 PCDH11XQ9BZA7 1347 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 PCDH11YQ9BZA8 1340 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 FOXN1O15353 648 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 CDC27P30260 824 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 ZNF827Q17R98 1081 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 LINC00301Q8NCQ3 95 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 NUP133Q8WUM0 1156 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 ANO10Q9NW15 660 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
INO80E-203ENST00000540562 MROH7-TTC4A0A0A0MT08 1334 aa16.41■□□□□ 0.22
INO80E-203ENST00000540562 ZNF532Q9HCE3 1301 aa16.41■□□□□ 0.22
INO80E-203ENST00000540562 ZNF202O95125 648 aa16.41■□□□□ 0.22
INO80E-203ENST00000540562 SLC3A2P08195 630 aaKnown RBP16.41■□□□□ 0.22
INO80E-203ENST00000540562 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
INO80E-203ENST00000540562 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms