RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 XRN1Q8IZH2 1706 aaKnown RBP10.64□□□□□ -0.71
LINC00943-206ENST00000540250 SH3PXD2AQ5TCZ1 1133 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 MICALL1Q8N3F8 863 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 TNFRSF25Q93038 417 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 PBXIP1Q96AQ6 731 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 NEUROD4Q9HD90 331 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 PRDM6Q9NQX0 595 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 ZNF232Q9UNY5 417 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 USP32Q8NFA0 1604 aa10.64□□□□□ -0.71
LINC00943-206ENST00000540250 TNS4Q8IZW8 715 aa10.63□□□□□ -0.71
LINC00943-206ENST00000540250 ALG2Q9H553 416 aa10.63□□□□□ -0.71
LINC00943-206ENST00000540250 ADGRB2O60241 1585 aa10.63□□□□□ -0.71
LINC00943-206ENST00000540250 PARD3Q8TEW0 1356 aa10.63□□□□□ -0.71
LINC00943-206ENST00000540250 CENPBP07199 599 aaPredicted RBP10.62□□□□□ -0.71
LINC00943-206ENST00000540250 NID1P14543 1247 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 ADH7P40394 386 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
LINC00943-206ENST00000540250 NCOA4Q13772 614 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 SAFB2Q14151 953 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00943-206ENST00000540250 RALBP1Q15311 655 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 GRIK4Q16099 956 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 RAB44Q7Z6P3 723 aaPredicted RBP10.62□□□□□ -0.71
LINC00943-206ENST00000540250 ATAD2Q6PL18 1390 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 PLEKHH1Q9ULM0 1364 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 NINLQ9Y2I6 1382 aa10.62□□□□□ -0.71
LINC00943-206ENST00000540250 PTCH1Q13635 1447 aa10.61□□□□□ -0.71
LINC00943-206ENST00000540250 PTPRUQ92729 1446 aa10.61□□□□□ -0.71
LINC00943-206ENST00000540250 PPP1R12CQ9BZL4 782 aa10.61□□□□□ -0.71
LINC00943-206ENST00000540250 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
LINC00943-206ENST00000540250 GPC6Q9Y625 555 aaPredicted RBP10.61□□□□□ -0.71
LINC00943-206ENST00000540250 NPC1L1Q9UHC9 1359 aa10.61□□□□□ -0.71
LINC00943-206ENST00000540250 MYBBP1AQ9BQG0 1328 aaKnown RBP10.6□□□□□ -0.71
LINC00943-206ENST00000540250 SERTM1A2A2V5 107 aa10.6□□□□□ -0.71
LINC00943-206ENST00000540250 RHPN1Q8TCX5 695 aa10.6□□□□□ -0.71
LINC00943-206ENST00000540250 NACC1Q96RE7 527 aa10.6□□□□□ -0.71
LINC00943-206ENST00000540250 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
LINC00943-206ENST00000540250 PIK3R4Q99570 1358 aa10.6□□□□□ -0.71
LINC00943-206ENST00000540250 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.59□□□□□ -0.71
LINC00943-206ENST00000540250 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
LINC00943-206ENST00000540250 LZTS3O60299 673 aaPredicted RBP10.59□□□□□ -0.71
LINC00943-206ENST00000540250 RFX1P22670 979 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 WAPLQ7Z5K2 1190 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 ANKLE2Q86XL3 938 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 SLC26A8Q96RN1 970 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 MRS2Q9HD23 443 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 ROBO2Q9HCK4 1378 aa10.59□□□□□ -0.71
LINC00943-206ENST00000540250 BRD4O60885 1362 aaPredicted RBP10.58□□□□□ -0.72
LINC00943-206ENST00000540250 SRPK2P78362 688 aaKnown RBP10.58□□□□□ -0.72
LINC00943-206ENST00000540250 CNGB1Q14028 1251 aaPredicted RBP10.58□□□□□ -0.72
LINC00943-206ENST00000540250 PRSS36Q5K4E3 855 aa10.58□□□□□ -0.72
LINC00943-206ENST00000540250 C20orf204Q6ZNR8 217 aa10.58□□□□□ -0.72
LINC00943-206ENST00000540250 NSD3Q9BZ95 1437 aa10.58□□□□□ -0.72
LINC00943-206ENST00000540250 TOPAZ1Q8N9V7 1692 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 PALM3A6NDB9 673 aaPredicted RBP10.57□□□□□ -0.72
LINC00943-206ENST00000540250 CCDC184Q52MB2 194 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 CC2D1BQ5T0F9 858 aaKnown RBP10.57□□□□□ -0.72
LINC00943-206ENST00000540250 ARTNQ5T4W7 220 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 TMC1Q8TDI8 760 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 HSH2DQ96JZ2 352 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 CDK19Q9BWU1 502 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 BRD7Q9NPI1 651 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 ANKRD26Q9UPS8 1709 aa10.57□□□□□ -0.72
LINC00943-206ENST00000540250 NPHP4O75161 1426 aaPredicted RBP10.57□□□□□ -0.72
LINC00943-206ENST00000540250 ATP7BP35670 1465 aa10.56□□□□□ -0.72
LINC00943-206ENST00000540250 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.56□□□□□ -0.72
LINC00943-206ENST00000540250 CEP63Q96MT8 703 aa10.56□□□□□ -0.72
LINC00943-206ENST00000540250 SLC12A5Q9H2X9 1139 aa10.56□□□□□ -0.72
LINC00943-206ENST00000540250 ZFP64Q9NPA5 681 aa10.56□□□□□ -0.72
LINC00943-206ENST00000540250 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
LINC00943-206ENST00000540250 KIF20BQ96Q89 1820 aa10.56□□□□□ -0.72
LINC00943-206ENST00000540250 ITSN1Q15811 1721 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 CD163L1Q9NR16 1453 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 LMOD1P29536 600 aaPredicted RBP10.55□□□□□ -0.72
LINC00943-206ENST00000540250 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 AMOTL2Q9Y2J4 779 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 NWD1Q149M9 1564 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 CDC42BPGQ6DT37 1551 aa10.55□□□□□ -0.72
LINC00943-206ENST00000540250 AKAP12Q02952 1782 aa10.54□□□□□ -0.72
LINC00943-206ENST00000540250 A0A1W2PP64 1363 aa10.54□□□□□ -0.72
LINC00943-206ENST00000540250 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
LINC00943-206ENST00000540250 MON2Q7Z3U7 1717 aa10.54□□□□□ -0.72
LINC00943-206ENST00000540250 UCN2Q96RP3 112 aa10.54□□□□□ -0.72
LINC00943-206ENST00000540250 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
LINC00943-206ENST00000540250 TFIP11Q9UBB9 837 aaKnown RBP10.54□□□□□ -0.72
LINC00943-206ENST00000540250 KIAA1024Q9UPX6 916 aa10.54□□□□□ -0.72
LINC00943-206ENST00000540250 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
LINC00943-206ENST00000540250 NSD2O96028 1365 aa10.53□□□□□ -0.72
LINC00943-206ENST00000540250 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
LINC00943-206ENST00000540250 SELPP16109 830 aa10.53□□□□□ -0.72
LINC00943-206ENST00000540250 KCNQ4P56696 695 aa10.53□□□□□ -0.72
LINC00943-206ENST00000540250 PSMA6P60900 246 aaKnown RBP10.53□□□□□ -0.72
LINC00943-206ENST00000540250 TYRO3Q06418 890 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms