RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 TOMM22Q9NS69 142 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 PCDHA7Q9UN72 937 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 IQSEC3Q9UPP2 1182 aaPredicted RBP15.98■□□□□ 0.15
BNIP3-202ENST00000540159 ITGA6P23229 1130 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 NDUFA8P51970 172 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 TNS3Q68CZ2 1445 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 USP27XA6NNY8 438 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 MCAMP43121 646 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 ZSCAN25Q6NSZ9 544 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.97■□□□□ 0.15
BNIP3-202ENST00000540159 KIF3AQ9Y496 699 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 V9GYY5 206 aaPredicted RBP15.97■□□□□ 0.15
BNIP3-202ENST00000540159 HMGB1P09429 215 aaKnown RBP15.97■□□□□ 0.15
BNIP3-202ENST00000540159 TCIRG1Q13488 830 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 SNW1Q13573 536 aaKnown RBP15.97■□□□□ 0.15
BNIP3-202ENST00000540159 ATP2B3Q16720 1220 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 PIGBQ92521 554 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
BNIP3-202ENST00000540159 BCL2L12Q9HB09 334 aa15.97■□□□□ 0.15
BNIP3-202ENST00000540159 KIF28PB7ZC32 967 aa15.96■□□□□ 0.15
BNIP3-202ENST00000540159 CBX1P83916 185 aa15.96■□□□□ 0.15
BNIP3-202ENST00000540159 KIF6Q6ZMV9 814 aa15.96■□□□□ 0.15
BNIP3-202ENST00000540159 ZNF213O14771 459 aa15.96■□□□□ 0.15
BNIP3-202ENST00000540159 CHAF1AQ13111 956 aaPredicted RBP15.96■□□□□ 0.15
BNIP3-202ENST00000540159 TPD52L1Q16890 204 aaPredicted RBP15.96■□□□□ 0.15
BNIP3-202ENST00000540159 RRP12Q5JTH9 1297 aaKnown RBP15.96■□□□□ 0.15
BNIP3-202ENST00000540159 CMTR1Q8N1G2 835 aaKnown RBP15.96■□□□□ 0.15
BNIP3-202ENST00000540159 B4E1Z4 1266 aa15.96■□□□□ 0.14
BNIP3-202ENST00000540159 NPHP1O15259 732 aa15.96■□□□□ 0.14
BNIP3-202ENST00000540159 TERF1P54274 439 aa15.96■□□□□ 0.14
BNIP3-202ENST00000540159 ANTXR2P58335 489 aa15.96■□□□□ 0.14
BNIP3-202ENST00000540159 HMGN5P82970 282 aaKnown RBP15.96■□□□□ 0.14
BNIP3-202ENST00000540159 ZKSCAN3Q9BRR0 538 aa15.96■□□□□ 0.14
BNIP3-202ENST00000540159 TRMT112Q9UI30 125 aaKnown RBP15.96■□□□□ 0.14
BNIP3-202ENST00000540159 SPECC1Q5M775 1068 aa15.95■□□□□ 0.14
BNIP3-202ENST00000540159 ATP2B1P20020 1258 aa15.95■□□□□ 0.14
BNIP3-202ENST00000540159 PHKA1P46020 1223 aa15.95■□□□□ 0.14
BNIP3-202ENST00000540159 DPCR1Q3MIW9 517 aa15.95■□□□□ 0.14
BNIP3-202ENST00000540159 SPTLC3Q9NUV7 552 aa15.95■□□□□ 0.14
BNIP3-202ENST00000540159 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
BNIP3-202ENST00000540159 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
BNIP3-202ENST00000540159 WWC3Q9ULE0 1092 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 MRC1P22897 1456 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 CAMTA1Q9Y6Y1 1673 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 TNNT1P13805 278 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 IQCB1Q15051 598 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 ZRSR1Q15695 479 aaKnown RBP15.94■□□□□ 0.14
BNIP3-202ENST00000540159 PLA2G4DQ86XP0 818 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 TDRD7Q8NHU6 1098 aaKnown RBP15.94■□□□□ 0.14
BNIP3-202ENST00000540159 CHMP4CQ96CF2 233 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 ZNF396Q96N95 335 aaPredicted RBP15.94■□□□□ 0.14
BNIP3-202ENST00000540159 ZBTB1Q9Y2K1 713 aa15.94■□□□□ 0.14
BNIP3-202ENST00000540159 NAA16Q6N069 864 aaPredicted RBP15.93■□□□□ 0.14
BNIP3-202ENST00000540159 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 TBC1D10CQ8IV04 446 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
BNIP3-202ENST00000540159 SMC2O95347 1197 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 CYB5R4Q7L1T6 521 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 HPS5Q9UPZ3 1129 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 LAMA4Q16363 1823 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 ALS2Q96Q42 1657 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 IGSF3O75054 1194 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 CTDSPL2Q05D32 466 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 FAM160A1Q05DH4 1040 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 STX1AQ16623 288 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 PPP4R3BQ5MIZ7 849 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 LLPHQ9BRT6 129 aaKnown RBP15.93■□□□□ 0.14
BNIP3-202ENST00000540159 BTG4Q9NY30 223 aa15.93■□□□□ 0.14
BNIP3-202ENST00000540159 SYNE3Q6ZMZ3 975 aa15.92■□□□□ 0.14
BNIP3-202ENST00000540159 MRPS27Q92552 414 aaKnown RBP15.92■□□□□ 0.14
BNIP3-202ENST00000540159 ISCA1Q9BUE6 129 aa15.92■□□□□ 0.14
BNIP3-202ENST00000540159 IRS4O14654 1257 aaPredicted RBP15.92■□□□□ 0.14
BNIP3-202ENST00000540159 RBM43Q6ZSC3 357 aaKnown RBP15.92■□□□□ 0.14
BNIP3-202ENST00000540159 NCOA7Q8NI08 942 aa15.92■□□□□ 0.14
BNIP3-202ENST00000540159 APPBP2Q92624 585 aa15.92■□□□□ 0.14
BNIP3-202ENST00000540159 PRIMPOLQ96LW4 560 aa15.92■□□□□ 0.14
BNIP3-202ENST00000540159 ZNF532Q9HCE3 1301 aa15.92■□□□□ 0.14
BNIP3-202ENST00000540159 TRDNQ13061 729 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 DHX40Q8IX18 779 aaKnown RBP15.91■□□□□ 0.14
BNIP3-202ENST00000540159 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 AKAP2Q9Y2D5 859 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 TTLL11Q8NHH1 800 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 ZNF274Q96GC6 653 aaPredicted RBP15.91■□□□□ 0.14
BNIP3-202ENST00000540159 NBPF3Q9H094 633 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 LMOD1P29536 600 aaPredicted RBP15.91■□□□□ 0.14
BNIP3-202ENST00000540159 MB21D2Q8IYB1 491 aaPredicted RBP15.91■□□□□ 0.14
BNIP3-202ENST00000540159 MIGA1Q8NAN2 632 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 ENGASEQ8NFI3 743 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
BNIP3-202ENST00000540159 SMIM22K7EJ46 135 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 SPTLC2O15270 562 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 SKILP12757 684 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 U2AF2P26368 475 aaKnown RBP eCLIP15.9■□□□□ 0.14
BNIP3-202ENST00000540159 CDC27P30260 824 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 GOLGA8FQ08AF8 430 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 GOLGA8DPQ0D2H9 430 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms