RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 AIMP1Q12904 312 aaKnown RBP9.17□□□□□ -0.94
NECAP1-204ENST00000540083 FKBP5Q13451 457 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-204ENST00000540083 TPTE2Q6XPS3 522 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 PPP1R42Q7Z4L9 355 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-204ENST00000540083 XAGE3Q8WTP9 111 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 TBC1D2Q9BYX2 928 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 ANTXR1Q9H6X2 564 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 PRDM9Q9NQV7 894 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 SMC4Q9NTJ3 1288 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 PPP1R1BQ9UD71 204 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-204ENST00000540083 PCDHGC3Q9UN70 934 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 HDAC5Q9UQL6 1122 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 ZNF500O60304 480 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-204ENST00000540083 CAMTA2O94983 1202 aa9.16□□□□□ -0.94
NECAP1-204ENST00000540083 FLIIQ13045 1269 aa9.16□□□□□ -0.94
NECAP1-204ENST00000540083 SKOR2Q2VWA4 1001 aaPredicted RBP9.16□□□□□ -0.94
NECAP1-204ENST00000540083 PLA2G2CQ5R387 149 aa9.16□□□□□ -0.94
NECAP1-204ENST00000540083 KSR2Q6VAB6 950 aa9.16□□□□□ -0.94
NECAP1-204ENST00000540083 LIAT1Q6ZQX7 453 aa9.16□□□□□ -0.94
NECAP1-204ENST00000540083 EXOC6Q8TAG9 804 aa9.16□□□□□ -0.94
NECAP1-204ENST00000540083 ARHGAP45Q92619 1136 aa9.16□□□□□ -0.94
NECAP1-204ENST00000540083 ZBTB7AO95365 584 aa9.15□□□□□ -0.94
NECAP1-204ENST00000540083 GJA5P36382 358 aa9.15□□□□□ -0.94
NECAP1-204ENST00000540083 MMP16P51512 607 aa9.15□□□□□ -0.94
NECAP1-204ENST00000540083 FAM193AP78312 1265 aa9.15□□□□□ -0.94
NECAP1-204ENST00000540083 ST5P78524 1137 aa9.15□□□□□ -0.94
NECAP1-204ENST00000540083 TRIM28Q13263 835 aaKnown RBP9.15□□□□□ -0.94
NECAP1-204ENST00000540083 TCIRG1Q13488 830 aa9.15□□□□□ -0.94
NECAP1-204ENST00000540083 SYMPKQ92797 1274 aaKnown RBP9.15□□□□□ -0.94
NECAP1-204ENST00000540083 API5Q9BZZ5 524 aaKnown RBP9.15□□□□□ -0.94
NECAP1-204ENST00000540083 NIP7Q9Y221 180 aaKnown RBP eCLIP9.15□□□□□ -0.94
NECAP1-204ENST00000540083 FCF1Q9Y324 198 aaKnown RBP9.15□□□□□ -0.94
NECAP1-204ENST00000540083 CARMIL3Q8ND23 1372 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 MMP10P09238 476 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 TM4SF1P30408 202 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 MCM4P33991 863 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 PIP4K2AP48426 406 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-204ENST00000540083 RARSP54136 660 aaKnown RBP9.14□□□□□ -0.95
NECAP1-204ENST00000540083 PROSER3Q2NL68 480 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 SPRYD7Q5W111 196 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 TTLL7Q6ZT98 887 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 LRP10Q7Z4F1 713 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 NBPF5PQ86XG9 351 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-204ENST00000540083 CCDC191Q8NCU4 936 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 SSH1Q8WYL5 1049 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 METTL22Q9BUU2 404 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-204ENST00000540083 TSPYL1Q9H0U9 437 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 CHMP4BQ9H444 224 aaKnown RBP9.14□□□□□ -0.95
NECAP1-204ENST00000540083 ZBTB3Q9H5J0 574 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 SRP68Q9UHB9 627 aaKnown RBP9.14□□□□□ -0.95
NECAP1-204ENST00000540083 ATP10DQ9P241 1426 aa9.14□□□□□ -0.95
NECAP1-204ENST00000540083 PI4KAP2A4QPH2 592 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
NECAP1-204ENST00000540083 ANXA1P04083 346 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 SERPINB2P05120 415 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 ZSCAN20P17040 1043 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-204ENST00000540083 MSNP26038 577 aaKnown RBP9.13□□□□□ -0.95
NECAP1-204ENST00000540083 RETREG3Q86VR2 466 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 CREBRFQ8IUR6 639 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 PI4KAP1Q8N8J0 262 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 DNAAF4Q8WXU2 420 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 UTP14AQ9BVJ6 771 aaKnown RBP9.13□□□□□ -0.95
NECAP1-204ENST00000540083 PHAXQ9H814 394 aaKnown RBP9.13□□□□□ -0.95
NECAP1-204ENST00000540083 BCCIPQ9P287 314 aaKnown RBP eCLIP9.13□□□□□ -0.95
NECAP1-204ENST00000540083 MAP3K2Q9Y2U5 619 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 CD2APQ9Y5K6 639 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 CASZ1Q86V15 1759 aa9.13□□□□□ -0.95
NECAP1-204ENST00000540083 TUBGCP6Q96RT7 1819 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 C4AP0C0L4 1744 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 PDE6BP35913 854 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 CCT4P50991 539 aaKnown RBP9.12□□□□□ -0.95
NECAP1-204ENST00000540083 TGFB2P61812 414 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 NFIXQ14938 502 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 ZKSCAN2Q63HK3 967 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 TBC1D9BQ66K14 1250 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 MSL1Q68DK7 614 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 BICDL1Q6ZP65 573 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 ZNF598Q86UK7 904 aaKnown RBP9.12□□□□□ -0.95
NECAP1-204ENST00000540083 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 ZNF34Q8IZ26 560 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 CNBD1Q8NA66 436 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 LINS1Q8NG48 757 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
NECAP1-204ENST00000540083 CWC25Q9NXE8 425 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-204ENST00000540083 SCN7AQ01118 1682 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 POLRMTO00411 1230 aaKnown RBP9.11□□□□□ -0.95
NECAP1-204ENST00000540083 SPTLC1O15269 473 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 GFRA3O60609 400 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 ALDH1L1O75891 902 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 RPIAP49247 311 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 HLFQ16534 295 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 RSBN1LQ6PCB5 846 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-204ENST00000540083 SASS6Q6UVJ0 657 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 ISCA1Q9BUE6 129 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 CHMP5Q9NZZ3 219 aa9.11□□□□□ -0.95
NECAP1-204ENST00000540083 TRMT112Q9UI30 125 aaKnown RBP9.11□□□□□ -0.95
NECAP1-204ENST00000540083 SH3TC1Q8TE82 1336 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms