RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PIH1D3Q9NQM4 214 aaKnown RBP20.21■□□□□ 0.83
COPS3-212ENST00000539941 ANKRD31Q8N7Z5 1873 aa20.21■□□□□ 0.83
COPS3-212ENST00000539941 MMP10P09238 476 aa20.2■□□□□ 0.82
COPS3-212ENST00000539941 TSGA10IPQ3SY00 556 aa20.2■□□□□ 0.82
COPS3-212ENST00000539941 FBXO33Q7Z6M2 555 aa20.2■□□□□ 0.82
COPS3-212ENST00000539941 RASEFQ8IZ41 740 aa20.2■□□□□ 0.82
COPS3-212ENST00000539941 XDHP47989 1333 aa20.2■□□□□ 0.82
COPS3-212ENST00000539941 PDS5AQ29RF7 1337 aaKnown RBP20.2■□□□□ 0.82
COPS3-212ENST00000539941 CHGBP05060 677 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 CCDC129Q6ZRS4 1044 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 OSBP2Q969R2 916 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 FAM84BQ96KN1 310 aaPredicted RBP20.19■□□□□ 0.82
COPS3-212ENST00000539941 DENND2AQ9ULE3 1009 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 SLC27A2O14975 620 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 MAP3K12Q12852 859 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 WASHC4Q2M389 1173 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 VPS37DQ86XT2 251 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
COPS3-212ENST00000539941 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
COPS3-212ENST00000539941 PDE6BP35913 854 aa20.18■□□□□ 0.82
COPS3-212ENST00000539941 GYG1P46976 350 aa20.18■□□□□ 0.82
COPS3-212ENST00000539941 SLC9C2Q5TAH2 1124 aa20.18■□□□□ 0.82
COPS3-212ENST00000539941 C15orf52Q6ZUT6 534 aaKnown RBP20.18■□□□□ 0.82
COPS3-212ENST00000539941 M0R2C6 588 aa20.17■□□□□ 0.82
COPS3-212ENST00000539941 PSMA5P28066 241 aa20.17■□□□□ 0.82
COPS3-212ENST00000539941 KRT32Q14532 448 aa20.17■□□□□ 0.82
COPS3-212ENST00000539941 ANKIB1Q9P2G1 1089 aa20.17■□□□□ 0.82
COPS3-212ENST00000539941 MYO5AQ9Y4I1 1855 aaKnown RBP20.17■□□□□ 0.82
COPS3-212ENST00000539941 IRS2Q9Y4H2 1338 aa20.16■□□□□ 0.82
COPS3-212ENST00000539941 LRRC37AA6NMS7 1700 aa20.16■□□□□ 0.82
COPS3-212ENST00000539941 NPR1P16066 1061 aa20.16■□□□□ 0.82
COPS3-212ENST00000539941 PDE6AP16499 860 aa20.16■□□□□ 0.82
COPS3-212ENST00000539941 HIBADHP31937 336 aaKnown RBP20.16■□□□□ 0.82
COPS3-212ENST00000539941 RPAP1Q9BWH6 1393 aaPredicted RBP20.16■□□□□ 0.82
COPS3-212ENST00000539941 HSPD1P10809 573 aaKnown RBP20.16■□□□□ 0.82
COPS3-212ENST00000539941 SLFNL1Q499Z3 407 aa20.16■□□□□ 0.82
COPS3-212ENST00000539941 ZSWIM6Q9HCJ5 1215 aa20.16■□□□□ 0.82
COPS3-212ENST00000539941 TCRBV5S4A2TA0A5A2 114 aa20.15■□□□□ 0.82
COPS3-212ENST00000539941 HSP90AA1P07900 732 aaKnown RBP20.15■□□□□ 0.82
COPS3-212ENST00000539941 POLD1P28340 1107 aa20.15■□□□□ 0.82
COPS3-212ENST00000539941 UPF3BQ9BZI7 483 aaKnown RBP20.15■□□□□ 0.82
COPS3-212ENST00000539941 SLKQ9H2G2 1235 aaPredicted RBP20.15■□□□□ 0.82
COPS3-212ENST00000539941 PODXL2Q9NZ53 605 aa20.15■□□□□ 0.82
COPS3-212ENST00000539941 ZNF532Q9HCE3 1301 aa20.14■□□□□ 0.82
COPS3-212ENST00000539941 MYH13Q9UKX3 1938 aa20.14■□□□□ 0.81
COPS3-212ENST00000539941 WTIPA6NIX2 430 aaPredicted RBP20.14■□□□□ 0.81
COPS3-212ENST00000539941 IGSF3O75054 1194 aa20.14■□□□□ 0.81
COPS3-212ENST00000539941 SRGNP10124 158 aa20.14■□□□□ 0.81
COPS3-212ENST00000539941 CASTP20810 708 aaKnown RBP20.14■□□□□ 0.81
COPS3-212ENST00000539941 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
COPS3-212ENST00000539941 JAKMIP1Q96N16 626 aaKnown RBP20.14■□□□□ 0.81
COPS3-212ENST00000539941 TTC14Q96N46 770 aa20.14■□□□□ 0.81
COPS3-212ENST00000539941 PUS7LQ9H0K6 701 aaKnown RBP20.14■□□□□ 0.81
COPS3-212ENST00000539941 WWC3Q9ULE0 1092 aa20.14■□□□□ 0.81
COPS3-212ENST00000539941 CYP46A1Q9Y6A2 500 aa20.14■□□□□ 0.81
COPS3-212ENST00000539941 COL1A1P02452 1464 aaPredicted RBP20.13■□□□□ 0.81
COPS3-212ENST00000539941 GPAA1O43292 621 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 MSL1Q68DK7 614 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 TMED8Q6PL24 325 aaPredicted RBP20.13■□□□□ 0.81
COPS3-212ENST00000539941 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 CTNNA3Q9UI47 895 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 KLRK1P26718 216 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 VPS53Q5VIR6 699 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 LRP2BPQ9P2M1 347 aa20.13■□□□□ 0.81
COPS3-212ENST00000539941 CIZ1Q9ULV3 898 aaPredicted RBP20.13■□□□□ 0.81
COPS3-212ENST00000539941 UTRNP46939 3433 aa20.12■□□□□ 0.81
COPS3-212ENST00000539941 GPSM2P81274 684 aa20.12■□□□□ 0.81
COPS3-212ENST00000539941 ADCK5Q3MIX3 580 aa20.12■□□□□ 0.81
COPS3-212ENST00000539941 RUFY3Q7L099 469 aa20.12■□□□□ 0.81
COPS3-212ENST00000539941 MAGEB6Q8N7X4 407 aa20.12■□□□□ 0.81
COPS3-212ENST00000539941 CHMP5Q9NZZ3 219 aa20.12■□□□□ 0.81
COPS3-212ENST00000539941 GGA1Q9UJY5 639 aa20.12■□□□□ 0.81
COPS3-212ENST00000539941 COL11A2P13942 1736 aaPredicted RBP20.11■□□□□ 0.81
COPS3-212ENST00000539941 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
COPS3-212ENST00000539941 DDIT3P35638 169 aa20.11■□□□□ 0.81
COPS3-212ENST00000539941 NFKBIBQ15653 356 aa20.11■□□□□ 0.81
COPS3-212ENST00000539941 ZNF804AQ7Z570 1209 aa20.11■□□□□ 0.81
COPS3-212ENST00000539941 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
COPS3-212ENST00000539941 MASTLQ96GX5 879 aa20.11■□□□□ 0.81
COPS3-212ENST00000539941 IQSEC3Q9UPP2 1182 aaPredicted RBP20.11■□□□□ 0.81
COPS3-212ENST00000539941 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
COPS3-212ENST00000539941 LTBP1Q14766 1721 aa20.11■□□□□ 0.81
COPS3-212ENST00000539941 DCAF8L1A6NGE4 600 aa20.1■□□□□ 0.81
COPS3-212ENST00000539941 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
COPS3-212ENST00000539941 CYP21A2P08686 494 aa20.1■□□□□ 0.81
COPS3-212ENST00000539941 TMX3Q96JJ7 454 aa20.1■□□□□ 0.81
COPS3-212ENST00000539941 ALDH8A1Q9H2A2 487 aaPredicted RBP20.1■□□□□ 0.81
COPS3-212ENST00000539941 NSFL1CQ9UNZ2 370 aaKnown RBP20.1■□□□□ 0.81
COPS3-212ENST00000539941 UFL1O94874 794 aa20.1■□□□□ 0.81
COPS3-212ENST00000539941 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
COPS3-212ENST00000539941 AIDAQ96BJ3 306 aa20.1■□□□□ 0.81
COPS3-212ENST00000539941 PDRG1Q9NUG6 133 aa20.1■□□□□ 0.81
COPS3-212ENST00000539941 ZMYM6O95789 1325 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 DUOX1Q9NRD9 1551 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 FOXP2O15409 715 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 HMGB1P09429 215 aaKnown RBP20.08■□□□□ 0.81
COPS3-212ENST00000539941 GNAT2P19087 354 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 RPS6KB1P23443 525 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 CUL4AQ13619 759 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms