RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 EP400Q96L91 3159 aa26.74■■□□□ 1.87
HOMER3-204ENST00000539827 TCRBV5S4A2TA0A5A2 114 aa26.74■■□□□ 1.87
HOMER3-204ENST00000539827 GBP4Q96PP9 640 aa26.74■■□□□ 1.87
HOMER3-204ENST00000539827 ZDHHC9Q9Y397 364 aa26.74■■□□□ 1.87
HOMER3-204ENST00000539827 MAGEB6Q8N7X4 407 aa26.73■■□□□ 1.87
HOMER3-204ENST00000539827 ANKRD2Q9GZV1 360 aa26.73■■□□□ 1.87
HOMER3-204ENST00000539827 TPCN1Q9ULQ1 816 aa26.73■■□□□ 1.87
HOMER3-204ENST00000539827 DDR1Q08345 913 aa26.73■■□□□ 1.87
HOMER3-204ENST00000539827 MAP3K12Q12852 859 aa26.73■■□□□ 1.87
HOMER3-204ENST00000539827 CCDC83Q8IWF9 413 aa26.73■■□□□ 1.87
HOMER3-204ENST00000539827 ALDH8A1Q9H2A2 487 aaPredicted RBP26.73■■□□□ 1.87
HOMER3-204ENST00000539827 GNL3LQ9NVN8 582 aaKnown RBP26.73■■□□□ 1.87
HOMER3-204ENST00000539827 ZNF804BA4D1E1 1349 aa26.72■■□□□ 1.87
HOMER3-204ENST00000539827 KLRK1P26718 216 aa26.72■■□□□ 1.87
HOMER3-204ENST00000539827 ST5P78524 1137 aa26.72■■□□□ 1.87
HOMER3-204ENST00000539827 TOB2Q14106 344 aaPredicted RBP26.72■■□□□ 1.87
HOMER3-204ENST00000539827 ME3Q16798 604 aa26.72■■□□□ 1.87
HOMER3-204ENST00000539827 CAVIN4Q5BKX8 364 aa26.72■■□□□ 1.87
HOMER3-204ENST00000539827 FAM84BQ96KN1 310 aaPredicted RBP26.72■■□□□ 1.87
HOMER3-204ENST00000539827 DOCK2Q92608 1830 aa26.72■■□□□ 1.87
HOMER3-204ENST00000539827 GRAPQ13588 217 aa26.71■■□□□ 1.87
HOMER3-204ENST00000539827 SLC51AQ86UW1 340 aa26.71■■□□□ 1.87
HOMER3-204ENST00000539827 GRAPLQ8TC17 118 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-204ENST00000539827 AKT1S1Q96B36 256 aa26.71■■□□□ 1.87
HOMER3-204ENST00000539827 FGAP02671 866 aa26.71■■□□□ 1.87
HOMER3-204ENST00000539827 HMGB2P26583 209 aaKnown RBP26.71■■□□□ 1.87
HOMER3-204ENST00000539827 ANKRD1Q15327 319 aa26.71■■□□□ 1.87
HOMER3-204ENST00000539827 VPS37DQ86XT2 251 aa26.71■■□□□ 1.87
HOMER3-204ENST00000539827 SH2B1Q9NRF2 756 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-204ENST00000539827 CTNNA3Q9UI47 895 aa26.71■■□□□ 1.87
HOMER3-204ENST00000539827 E7EWF7 191 aa26.7■■□□□ 1.86
HOMER3-204ENST00000539827 FOXD4L5Q5VV16 416 aaPredicted RBP26.7■■□□□ 1.86
HOMER3-204ENST00000539827 NECAB1Q8N987 351 aa26.7■■□□□ 1.86
HOMER3-204ENST00000539827 FOXD4L4Q8WXT5 416 aaPredicted RBP26.7■■□□□ 1.86
HOMER3-204ENST00000539827 LAMA4Q16363 1823 aa26.7■■□□□ 1.86
HOMER3-204ENST00000539827 POLRMTO00411 1230 aaKnown RBP26.69■■□□□ 1.86
HOMER3-204ENST00000539827 HAND2P61296 217 aa26.69■■□□□ 1.86
HOMER3-204ENST00000539827 POTEAQ6S8J7 498 aa26.69■■□□□ 1.86
HOMER3-204ENST00000539827 ST3GAL1Q11201 340 aa26.69■■□□□ 1.86
HOMER3-204ENST00000539827 Q6ZUG5 572 aa26.69■■□□□ 1.86
HOMER3-204ENST00000539827 COL23A1Q86Y22 540 aaPredicted RBP26.69■■□□□ 1.86
HOMER3-204ENST00000539827 RPGRQ92834 1020 aaKnown RBP26.69■■□□□ 1.86
HOMER3-204ENST00000539827 LRP2BPQ9P2M1 347 aa26.69■■□□□ 1.86
HOMER3-204ENST00000539827 DDX11L8A8MPP1 907 aa26.68■■□□□ 1.86
HOMER3-204ENST00000539827 DTNBO60941 627 aa26.68■■□□□ 1.86
HOMER3-204ENST00000539827 BAG4O95429 457 aaKnown RBP26.68■■□□□ 1.86
HOMER3-204ENST00000539827 FBXO33Q7Z6M2 555 aa26.68■■□□□ 1.86
HOMER3-204ENST00000539827 LRRC2Q9BYS8 371 aa26.68■■□□□ 1.86
HOMER3-204ENST00000539827 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.68■■□□□ 1.86
HOMER3-204ENST00000539827 COL1A1P02452 1464 aaPredicted RBP26.68■■□□□ 1.86
HOMER3-204ENST00000539827 IMMTQ16891 758 aaKnown RBP26.67■■□□□ 1.86
HOMER3-204ENST00000539827 AIDAQ96BJ3 306 aa26.67■■□□□ 1.86
HOMER3-204ENST00000539827 ABCF2Q9UG63 623 aa26.67■■□□□ 1.86
HOMER3-204ENST00000539827 SMC3Q9UQE7 1217 aa26.67■■□□□ 1.86
HOMER3-204ENST00000539827 STRBPQ96SI9 672 aaKnown RBP26.66■■□□□ 1.86
HOMER3-204ENST00000539827 APPP05067 770 aa26.66■■□□□ 1.86
HOMER3-204ENST00000539827 HMGB1P09429 215 aaKnown RBP26.66■■□□□ 1.86
HOMER3-204ENST00000539827 CLEC17AQ6ZS10 378 aa26.66■■□□□ 1.86
HOMER3-204ENST00000539827 DHX32Q7L7V1 743 aaKnown RBP26.66■■□□□ 1.86
HOMER3-204ENST00000539827 DENND2AQ9ULE3 1009 aa26.66■■□□□ 1.86
HOMER3-204ENST00000539827 MBD4O95243 580 aa26.65■■□□□ 1.86
HOMER3-204ENST00000539827 BRD1O95696 1058 aa26.65■■□□□ 1.86
HOMER3-204ENST00000539827 DEKP35659 375 aaKnown RBP26.65■■□□□ 1.86
HOMER3-204ENST00000539827 ARMT1Q9H993 441 aa26.65■■□□□ 1.86
HOMER3-204ENST00000539827 HIBADHP31937 336 aaKnown RBP26.64■■□□□ 1.86
HOMER3-204ENST00000539827 CRY2Q49AN0 593 aa26.64■■□□□ 1.86
HOMER3-204ENST00000539827 RAI14Q9P0K7 980 aa26.64■■□□□ 1.86
HOMER3-204ENST00000539827 ANKIB1Q9P2G1 1089 aa26.64■■□□□ 1.86
HOMER3-204ENST00000539827 STK3Q13188 491 aa26.64■■□□□ 1.85
HOMER3-204ENST00000539827 TXNRD3Q86VQ6 643 aa26.64■■□□□ 1.85
HOMER3-204ENST00000539827 RBM17Q96I25 401 aaKnown RBP26.64■■□□□ 1.85
HOMER3-204ENST00000539827 ZNF213O14771 459 aa26.63■■□□□ 1.85
HOMER3-204ENST00000539827 EXOSC10Q01780 885 aaKnown RBP26.63■■□□□ 1.85
HOMER3-204ENST00000539827 TNS1Q9HBL0 1735 aaKnown RBP26.63■■□□□ 1.85
HOMER3-204ENST00000539827 CYP7A1P22680 504 aa26.62■■□□□ 1.85
HOMER3-204ENST00000539827 FGD1P98174 961 aa26.62■■□□□ 1.85
HOMER3-204ENST00000539827 CHST3Q7LGC8 479 aa26.62■■□□□ 1.85
HOMER3-204ENST00000539827 TRAK2O60296 914 aa26.62■■□□□ 1.85
HOMER3-204ENST00000539827 GJB2P29033 226 aa26.62■■□□□ 1.85
HOMER3-204ENST00000539827 BRF1Q92994 677 aa26.62■■□□□ 1.85
HOMER3-204ENST00000539827 LCORLQ8N3X6 602 aa26.61■■□□□ 1.85
HOMER3-204ENST00000539827 MIGA1Q8NAN2 632 aa26.61■■□□□ 1.85
HOMER3-204ENST00000539827 IRS2Q9Y4H2 1338 aa26.61■■□□□ 1.85
HOMER3-204ENST00000539827 MCTP1Q6DN14 999 aa26.6■■□□□ 1.85
HOMER3-204ENST00000539827 NLGN1Q8N2Q7 840 aa26.6■■□□□ 1.85
HOMER3-204ENST00000539827 CHAMP1Q96JM3 812 aa26.6■■□□□ 1.85
HOMER3-204ENST00000539827 PATL2C9JE40 543 aaKnown RBP26.6■■□□□ 1.85
HOMER3-204ENST00000539827 SEMA3EO15041 775 aa26.6■■□□□ 1.85
HOMER3-204ENST00000539827 CHAF1AQ13111 956 aaPredicted RBP26.6■■□□□ 1.85
HOMER3-204ENST00000539827 LEMD3Q9Y2U8 911 aa26.6■■□□□ 1.85
HOMER3-204ENST00000539827 PRKAB2O43741 272 aa26.59■■□□□ 1.85
HOMER3-204ENST00000539827 GPSM2P81274 684 aa26.59■■□□□ 1.85
HOMER3-204ENST00000539827 ADGRA1Q86SQ6 560 aa26.59■■□□□ 1.85
HOMER3-204ENST00000539827 XDHP47989 1333 aa26.59■■□□□ 1.85
HOMER3-204ENST00000539827 FLAD1Q8NFF5 587 aa26.58■■□□□ 1.85
HOMER3-204ENST00000539827 GPR101Q96P66 508 aaPredicted RBP26.58■■□□□ 1.85
HOMER3-204ENST00000539827 NBPF3Q9H094 633 aa26.58■■□□□ 1.85
HOMER3-204ENST00000539827 EPB41L4AQ9HCS5 686 aaPredicted RBP26.58■■□□□ 1.85
HOMER3-204ENST00000539827 GOLGA6L22H0YM25 854 aa26.58■■□□□ 1.85
HOMER3-204ENST00000539827 APOBRQ0VD83 1088 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms