RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 HOXA10P31260 410 aaPredicted RBP11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 ECE1P42892 770 aa11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 GRM1Q13255 1194 aa11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 SCARF1Q14162 830 aa11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 RILPL2Q969X0 211 aa11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 SLX4Q8IY92 1834 aa11.19□□□□□ -0.62
RTN4IP1-204ENST00000539449 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 CDC45O75419 566 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 SRGNP10124 158 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 KLRK1P26718 216 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 PHKA1P46020 1223 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 CNTROBQ8N137 903 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 RBM17Q96I25 401 aaKnown RBP11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 GPATCH3Q96I76 525 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 CRAMP1Q96RY5 1269 aa11.18□□□□□ -0.62
RTN4IP1-204ENST00000539449 ERC2O15083 957 aa11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 CHGBP05060 677 aa11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 PUM3Q15397 648 aaKnown RBP11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 MAP1SQ66K74 1059 aaPredicted RBP11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 OLFM4Q6UX06 510 aa11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 PI16Q6UXB8 463 aa11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 LPIN2Q92539 896 aa11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 IL25Q9H293 177 aa11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
RTN4IP1-204ENST00000539449 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 H0YIN7 160 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 CA12O43570 354 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 C21orf2O43822 256 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 SLC5A1P13866 664 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 NPR1P16066 1061 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 CHMLP26374 656 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 PDE6BP35913 854 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 BCAMP50895 628 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 GPSM2P81274 684 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 TTC39AQ5SRH9 613 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 CCDC102BQ68D86 513 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 DNAJC2Q99543 621 aaKnown RBP11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 HAUS7Q99871 368 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 ANTXR1Q9H6X2 564 aa11.16□□□□□ -0.62
RTN4IP1-204ENST00000539449 MYH7P12883 1935 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 TRPM7Q96QT4 1865 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 AOC2O75106 756 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 MAP2K2P36507 400 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 MCAMP43121 646 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 GYG1P46976 350 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 UBE4AQ14139 1066 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 SLFNL1Q499Z3 407 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 TXNRD3Q86VQ6 643 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 HACL1Q9UJ83 578 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 MYH13Q9UKX3 1938 aa11.15□□□□□ -0.62
RTN4IP1-204ENST00000539449 GOLIM4O00461 696 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 BBOX1O75936 387 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 EPHX2P34913 555 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 ZAP70P43403 619 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 EVI5LQ96CN4 794 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
RTN4IP1-204ENST00000539449 ZNF804BA4D1E1 1349 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 ARID4AP29374 1257 aaPredicted RBP11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 FBXO33Q7Z6M2 555 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 SP8Q8IXZ3 490 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 ZNF512BQ96KM6 892 aaPredicted RBP11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 ESYT1Q9BSJ8 1104 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 PAG1Q9NWQ8 432 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 IQSEC3Q9UPP2 1182 aaPredicted RBP11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 DOCK2Q92608 1830 aa11.13□□□□□ -0.63
RTN4IP1-204ENST00000539449 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 CYP2E1P05181 493 aaPredicted RBP11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 FKBP4Q02790 459 aaKnown RBP eCLIP11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 NMIQ13287 307 aaPredicted RBP11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 RASGRF1Q13972 1273 aa11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 HABP4Q5JVS0 413 aaKnown RBP11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 FAM227BQ96M60 508 aa11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 FSD1Q9BTV5 496 aa11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 PIH1D3Q9NQM4 214 aaKnown RBP11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 ANKIB1Q9P2G1 1089 aa11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 POLLQ9UGP5 575 aa11.12□□□□□ -0.63
RTN4IP1-204ENST00000539449 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms