RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 TNRC6CQ9HCJ0 1690 aaKnown RBP12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 C21orf2O43822 256 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 NR1I2O75469 434 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 SBF1O95248 1867 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 NTSR2O95665 410 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 BLOC1S3Q6QNY0 202 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 MAP3K2Q9Y2U5 619 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
GTF2H3-207ENST00000539429 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 PI4KAP2A4QPH2 592 aa12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 VAMP4O75379 141 aa12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 HNRNPUQ00839 825 aaKnown RBP eCLIP12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 KSR2Q6VAB6 950 aa12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 PI4KAP1Q8N8J0 262 aa12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 RBM17Q96I25 401 aaKnown RBP12.06□□□□□ -0.48
GTF2H3-207ENST00000539429 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 SOGA3Q5TF21 947 aa12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 G2E3Q7L622 706 aa12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 BANK1Q8NDB2 785 aa12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 SYMPKQ92797 1274 aaKnown RBP12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 FAM89AQ96GI7 184 aa12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 CWC25Q9NXE8 425 aaPredicted RBP12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 ZNF521Q96K83 1311 aa12.05□□□□□ -0.48
GTF2H3-207ENST00000539429 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 DDX60Q8IY21 1712 aaKnown RBP12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 HSP90B1P14625 803 aaKnown RBP12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 RASSF7Q02833 373 aa12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 RNF181Q9P0P0 153 aa12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 TAF1P21675 1872 aa12.04□□□□□ -0.48
GTF2H3-207ENST00000539429 MYH3P11055 1940 aa12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 KLRG2A4D1S0 409 aaPredicted RBP12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 COPS2P61201 443 aa12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 CCDC93Q567U6 631 aa12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 RETREG3Q86VR2 466 aa12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 CCDC191Q8NCU4 936 aa12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
GTF2H3-207ENST00000539429 IRS4O14654 1257 aaPredicted RBP12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 LMNB1P20700 586 aa12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 BRICD5Q6PL45 260 aa12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 RNF19BQ6ZMZ0 732 aa12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 ZBTB38Q8NAP3 1195 aaPredicted RBP12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.49
GTF2H3-207ENST00000539429 TIAM2Q8IVF5 1701 aa12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 AP1G2O75843 785 aa12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 CRY2Q49AN0 593 aa12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 SLC4A10Q6U841 1118 aa12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 DNAAF4Q8WXU2 420 aa12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 JARID2Q92833 1246 aaPredicted RBP12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 THAP11Q96EK4 314 aa12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 ADCY9O60503 1353 aa12.01□□□□□ -0.49
GTF2H3-207ENST00000539429 CFAP99D6REC4 459 aa12□□□□□ -0.49
GTF2H3-207ENST00000539429 PCCAP05165 728 aaPredicted RBP12□□□□□ -0.49
GTF2H3-207ENST00000539429 HOXA10P31260 410 aaPredicted RBP12□□□□□ -0.49
GTF2H3-207ENST00000539429 MCM6Q14566 821 aa12□□□□□ -0.49
GTF2H3-207ENST00000539429 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
GTF2H3-207ENST00000539429 RTKN2Q8IZC4 609 aa12□□□□□ -0.49
GTF2H3-207ENST00000539429 PRR7Q8TB68 274 aa12□□□□□ -0.49
GTF2H3-207ENST00000539429 CRAMP1Q96RY5 1269 aa12□□□□□ -0.49
GTF2H3-207ENST00000539429 MTRQ99707 1265 aa12□□□□□ -0.49
GTF2H3-207ENST00000539429 USB1Q9BQ65 265 aaKnown RBP12□□□□□ -0.49
GTF2H3-207ENST00000539429 HCSTQ9UBK5 93 aa12□□□□□ -0.49
GTF2H3-207ENST00000539429 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
GTF2H3-207ENST00000539429 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
GTF2H3-207ENST00000539429 BCL2L13Q9BXK5 485 aa11.99□□□□□ -0.49
GTF2H3-207ENST00000539429 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
GTF2H3-207ENST00000539429 ABCC4O15439 1325 aa11.99□□□□□ -0.49
GTF2H3-207ENST00000539429 SPEF2Q9C093 1822 aa11.99□□□□□ -0.49
GTF2H3-207ENST00000539429 NEURL1BA8MQ27 555 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 F6X3S4 739 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 NFKBIEO00221 500 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 PDE8AO60658 829 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 CCDC152Q4G0S7 254 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 OLFM4Q6UX06 510 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 UBE3BQ7Z3V4 1068 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 LINS1Q8NG48 757 aa11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 CCDC85AQ96PX6 553 aaPredicted RBP11.98□□□□□ -0.49
GTF2H3-207ENST00000539429 KDM2BQ8NHM5 1336 aa11.97□□□□□ -0.49
GTF2H3-207ENST00000539429 BBOX1O75936 387 aa11.97□□□□□ -0.49
GTF2H3-207ENST00000539429 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
GTF2H3-207ENST00000539429 GRAPQ13588 217 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms