RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 TUT1Q9H6E5 874 aaKnown RBP8.8□□□□□ -1
SSPN-206ENST00000539019 ZFYVE28Q9HCC9 887 aa8.8□□□□□ -1
SSPN-206ENST00000539019 SEC31BQ9NQW1 1179 aa8.8□□□□□ -1
SSPN-206ENST00000539019 H3BRJ5 948 aa8.79□□□□□ -1
SSPN-206ENST00000539019 EDN3P14138 238 aa8.79□□□□□ -1
SSPN-206ENST00000539019 CABP4P57796 275 aa8.79□□□□□ -1
SSPN-206ENST00000539019 Q6ZS46 218 aa8.79□□□□□ -1
SSPN-206ENST00000539019 CUX2O14529 1486 aa8.78□□□□□ -1
SSPN-206ENST00000539019 GLB1P16278 677 aa8.78□□□□□ -1
SSPN-206ENST00000539019 PRR23CQ6ZRP0 262 aa8.78□□□□□ -1
SSPN-206ENST00000539019 ACAD11Q709F0 780 aa8.78□□□□□ -1
SSPN-206ENST00000539019 TXNDC2Q86VQ3 553 aa8.78□□□□□ -1
SSPN-206ENST00000539019 FOXD4L4Q8WXT5 416 aaPredicted RBP8.78□□□□□ -1
SSPN-206ENST00000539019 UBL7Q96S82 380 aaPredicted RBP8.78□□□□□ -1
SSPN-206ENST00000539019 LATS2Q9NRM7 1088 aa8.78□□□□□ -1
SSPN-206ENST00000539019 BRPF3Q9ULD4 1205 aa8.78□□□□□ -1
SSPN-206ENST00000539019 SOX13Q9UN79 622 aa8.78□□□□□ -1
SSPN-206ENST00000539019 AMOTL2Q9Y2J4 779 aa8.78□□□□□ -1
SSPN-206ENST00000539019 CUX1P39880 1505 aa8.78□□□□□ -1
SSPN-206ENST00000539019 ADAM11O75078 769 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 POLR3DP05423 398 aaPredicted RBP8.77□□□□□ -1.01
SSPN-206ENST00000539019 PIP4K2BP78356 416 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 ARHGAP4P98171 946 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 DUOXA2Q1HG44 320 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 PEAR1Q5VY43 1037 aaPredicted RBP8.77□□□□□ -1.01
SSPN-206ENST00000539019 KIAA1211Q6ZU35 1233 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 WNT8BQ93098 351 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 OSGEPQ9NPF4 335 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 TOPBP1Q92547 1522 aa8.77□□□□□ -1.01
SSPN-206ENST00000539019 PDE4CQ08493 712 aa8.76□□□□□ -1.01
SSPN-206ENST00000539019 HGSNATQ68CP4 663 aa8.76□□□□□ -1.01
SSPN-206ENST00000539019 SLC7A3Q8WY07 619 aa8.76□□□□□ -1.01
SSPN-206ENST00000539019 BSNDQ8WZ55 320 aa8.76□□□□□ -1.01
SSPN-206ENST00000539019 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
SSPN-206ENST00000539019 VN1R5Q7Z5H4 357 aa8.75□□□□□ -1.01
SSPN-206ENST00000539019 UBASH3BQ8TF42 649 aa8.75□□□□□ -1.01
SSPN-206ENST00000539019 ASAP3Q8TDY4 903 aa8.74□□□□□ -1.01
SSPN-206ENST00000539019 PRDM2Q13029 1718 aa8.74□□□□□ -1.01
SSPN-206ENST00000539019 NLRP12P59046 1061 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 BHLHE41Q9C0J9 482 aaPredicted RBP8.73□□□□□ -1.01
SSPN-206ENST00000539019 DNMBPQ6XZF7 1577 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 POLA1P09884 1462 aaPredicted RBP8.73□□□□□ -1.01
SSPN-206ENST00000539019 SCO2A0A1W2PP80 73 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 NDUFB5O43674 189 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 ARL4DP49703 201 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 C19orf57Q0VDD7 668 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 IKBKEQ14164 716 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 USPL1Q5W0Q7 1092 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 GALNT12Q8IXK2 581 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 ARMC10Q8N2F6 343 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 CEP41Q9BYV8 373 aa8.73□□□□□ -1.01
SSPN-206ENST00000539019 METTL12A8MUP2 240 aa8.72□□□□□ -1.01
SSPN-206ENST00000539019 CCER1Q8TC90 406 aaPredicted RBP8.72□□□□□ -1.01
SSPN-206ENST00000539019 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
SSPN-206ENST00000539019 WRNQ14191 1432 aaPredicted RBP eCLIP8.71□□□□□ -1.01
SSPN-206ENST00000539019 SYNJ1O43426 1573 aa8.71□□□□□ -1.02
SSPN-206ENST00000539019 A0A1W2PP55 124 aa8.71□□□□□ -1.02
SSPN-206ENST00000539019 FAM129BQ96TA1 746 aa8.71□□□□□ -1.02
SSPN-206ENST00000539019 RAXQ9Y2V3 346 aa8.71□□□□□ -1.02
SSPN-206ENST00000539019 NEFLP07196 543 aa8.7□□□□□ -1.02
SSPN-206ENST00000539019 FSTP19883 344 aa8.7□□□□□ -1.02
SSPN-206ENST00000539019 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
SSPN-206ENST00000539019 ARTNQ5T4W7 220 aa8.7□□□□□ -1.02
SSPN-206ENST00000539019 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
SSPN-206ENST00000539019 ESRRAP11474 423 aaPredicted RBP8.69□□□□□ -1.02
SSPN-206ENST00000539019 ORC1Q13415 861 aa8.69□□□□□ -1.02
SSPN-206ENST00000539019 CCNJLQ8IV13 435 aa8.69□□□□□ -1.02
SSPN-206ENST00000539019 CITED4Q96RK1 184 aa8.69□□□□□ -1.02
SSPN-206ENST00000539019 RUSC1Q9BVN2 902 aa8.69□□□□□ -1.02
SSPN-206ENST00000539019 RNF208Q9H0X6 261 aa8.69□□□□□ -1.02
SSPN-206ENST00000539019 STOML1Q9UBI4 398 aa8.69□□□□□ -1.02
SSPN-206ENST00000539019 FGD5Q6ZNL6 1462 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 TOP2BQ02880 1626 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 TARBP1Q13395 1621 aaKnown RBP8.68□□□□□ -1.02
SSPN-206ENST00000539019 A0A096LPE4 126 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 A0A1W2PPZ6 126 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 DHX15O43143 795 aaKnown RBP8.68□□□□□ -1.02
SSPN-206ENST00000539019 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
SSPN-206ENST00000539019 TCF12Q99081 682 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 LIN7BQ9HAP6 207 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 ZFP64Q9NPA5 681 aa8.68□□□□□ -1.02
SSPN-206ENST00000539019 ZNF608Q9ULD9 1512 aaPredicted RBP8.68□□□□□ -1.02
SSPN-206ENST00000539019 IGHA2P01877 340 aa8.67□□□□□ -1.02
SSPN-206ENST00000539019 GRIA4P48058 902 aa8.67□□□□□ -1.02
SSPN-206ENST00000539019 UVSSAQ2YD98 709 aa8.67□□□□□ -1.02
SSPN-206ENST00000539019 SLC51AQ86UW1 340 aa8.67□□□□□ -1.02
SSPN-206ENST00000539019 TMC1Q8TDI8 760 aa8.67□□□□□ -1.02
SSPN-206ENST00000539019 NIF3L1Q9GZT8 377 aa8.67□□□□□ -1.02
SSPN-206ENST00000539019 SOX17Q9H6I2 414 aaPredicted RBP8.67□□□□□ -1.02
SSPN-206ENST00000539019 RNF112Q9ULX5 631 aa8.67□□□□□ -1.02
SSPN-206ENST00000539019 IFT140Q96RY7 1462 aa8.66□□□□□ -1.02
SSPN-206ENST00000539019 MEGF11A6BM72 1044 aa8.66□□□□□ -1.02
SSPN-206ENST00000539019 SOWAHDA6NJG2 315 aa8.66□□□□□ -1.02
SSPN-206ENST00000539019 SART1O43290 800 aaKnown RBP8.66□□□□□ -1.02
SSPN-206ENST00000539019 CPNE3O75131 537 aaKnown RBP8.66□□□□□ -1.02
SSPN-206ENST00000539019 KIAA0319Q5VV43 1072 aa8.66□□□□□ -1.02
SSPN-206ENST00000539019 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
SSPN-206ENST00000539019 MYRFLQ96LU7 910 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms