RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TDRD7Q8NHU6 1098 aaKnown RBP28.69■■■□□ 2.18
TMEM260-202ENST00000538838 MYO5AQ9Y4I1 1855 aaKnown RBP28.68■■■□□ 2.18
TMEM260-202ENST00000538838 FRAT2O75474 233 aaPredicted RBP28.68■■■□□ 2.18
TMEM260-202ENST00000538838 GLRX3O76003 335 aaKnown RBP28.68■■■□□ 2.18
TMEM260-202ENST00000538838 SNRKQ9NRH2 765 aa28.68■■■□□ 2.18
TMEM260-202ENST00000538838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.67■■■□□ 2.18
TMEM260-202ENST00000538838 HMG20BQ9P0W2 317 aa28.67■■■□□ 2.18
TMEM260-202ENST00000538838 NIM1KQ8IY84 436 aa28.66■■■□□ 2.18
TMEM260-202ENST00000538838 DNAJC2Q99543 621 aaKnown RBP28.66■■■□□ 2.18
TMEM260-202ENST00000538838 JAG2Q9Y219 1238 aa28.66■■■□□ 2.18
TMEM260-202ENST00000538838 SEMA3EO15041 775 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 GRIN3BO60391 1043 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 TTC22Q5TAA0 569 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 SPATA5Q8NB90 893 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 DOCK2Q92608 1830 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 MAP4K4O95819 1239 aaPredicted RBP28.65■■■□□ 2.18
TMEM260-202ENST00000538838 LMNB1P20700 586 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 CHAF1AQ13111 956 aaPredicted RBP28.65■■■□□ 2.18
TMEM260-202ENST00000538838 HAUS7Q99871 368 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 DENND2AQ9ULE3 1009 aa28.65■■■□□ 2.18
TMEM260-202ENST00000538838 YDJCA8MPS7 323 aa28.64■■■□□ 2.18
TMEM260-202ENST00000538838 GSPT1P15170 499 aaKnown RBP28.64■■■□□ 2.18
TMEM260-202ENST00000538838 ZAP70P43403 619 aa28.64■■■□□ 2.18
TMEM260-202ENST00000538838 PODNQ7Z5L7 613 aa28.64■■■□□ 2.18
TMEM260-202ENST00000538838 EDC3Q96F86 508 aaKnown RBP28.63■■■□□ 2.17
TMEM260-202ENST00000538838 KCNQ5Q9NR82 932 aa28.63■■■□□ 2.17
TMEM260-202ENST00000538838 JDP2Q8WYK2 163 aa28.62■■■□□ 2.17
TMEM260-202ENST00000538838 MYH7P12883 1935 aa28.62■■■□□ 2.17
TMEM260-202ENST00000538838 ZBTB22O15209 634 aa28.61■■■□□ 2.17
TMEM260-202ENST00000538838 FBXW7Q969H0 707 aa28.61■■■□□ 2.17
TMEM260-202ENST00000538838 PDS5AQ29RF7 1337 aaKnown RBP28.61■■■□□ 2.17
TMEM260-202ENST00000538838 GTF2IP78347 998 aa28.61■■■□□ 2.17
TMEM260-202ENST00000538838 ZNRF3Q9ULT6 936 aa28.61■■■□□ 2.17
TMEM260-202ENST00000538838 GOLIM4O00461 696 aa28.6■■■□□ 2.17
TMEM260-202ENST00000538838 CYP2E1P05181 493 aaPredicted RBP28.6■■■□□ 2.17
TMEM260-202ENST00000538838 ANTXR1Q9H6X2 564 aa28.6■■■□□ 2.17
TMEM260-202ENST00000538838 PAG1Q9NWQ8 432 aa28.6■■■□□ 2.17
TMEM260-202ENST00000538838 RNF181Q9P0P0 153 aa28.6■■■□□ 2.17
TMEM260-202ENST00000538838 FAM205AQ6ZU69 1335 aa28.59■■■□□ 2.17
TMEM260-202ENST00000538838 MAST2Q6P0Q8 1798 aa28.59■■■□□ 2.17
TMEM260-202ENST00000538838 TRIM6-TRIM34B2RNG4 842 aa28.58■■■□□ 2.17
TMEM260-202ENST00000538838 C9orf131Q5VYM1 1079 aa28.58■■■□□ 2.17
TMEM260-202ENST00000538838 TTLL5Q6EMB2 1281 aa28.58■■■□□ 2.17
TMEM260-202ENST00000538838 TBC1D9Q6ZT07 1266 aa28.58■■■□□ 2.17
TMEM260-202ENST00000538838 RAD17O75943 681 aa28.57■■■□□ 2.16
TMEM260-202ENST00000538838 PIH1D3Q9NQM4 214 aaKnown RBP28.57■■■□□ 2.16
TMEM260-202ENST00000538838 USP17L3A6NCW0 530 aa28.56■■■□□ 2.16
TMEM260-202ENST00000538838 USP17L4A6NCW7 530 aa28.56■■■□□ 2.16
TMEM260-202ENST00000538838 USP17L1Q7RTZ2 530 aa28.56■■■□□ 2.16
TMEM260-202ENST00000538838 WDR66Q8TBY9 1149 aa28.56■■■□□ 2.16
TMEM260-202ENST00000538838 BMP2KLQ5H9B9 411 aa28.55■■■□□ 2.16
TMEM260-202ENST00000538838 RILPL2Q969X0 211 aa28.55■■■□□ 2.16
TMEM260-202ENST00000538838 MXD3Q9BW11 206 aa28.55■■■□□ 2.16
TMEM260-202ENST00000538838 SALL1Q9NSC2 1324 aa28.55■■■□□ 2.16
TMEM260-202ENST00000538838 FZD9O00144 591 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 SDSP20132 328 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 MFSD14BQ5SR56 506 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 DACT2Q5SW24 774 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 STRIP1Q5VSL9 837 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 ABCF2Q9UG63 623 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 CXCL9Q07325 125 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 CNTROBQ8N137 903 aa28.54■■■□□ 2.16
TMEM260-202ENST00000538838 ZNF541Q9H0D2 1346 aa28.53■■■□□ 2.16
TMEM260-202ENST00000538838 PSMD14O00487 310 aa28.53■■■□□ 2.16
TMEM260-202ENST00000538838 TTF1Q15361 905 aaPredicted RBP28.53■■■□□ 2.16
TMEM260-202ENST00000538838 CERS5Q8N5B7 392 aa28.53■■■□□ 2.16
TMEM260-202ENST00000538838 EVI5LQ96CN4 794 aa28.53■■■□□ 2.16
TMEM260-202ENST00000538838 DCAF8L1A6NGE4 600 aa28.52■■■□□ 2.16
TMEM260-202ENST00000538838 GRIK5Q16478 980 aa28.52■■■□□ 2.16
TMEM260-202ENST00000538838 TBC1D22AQ8WUA7 517 aa28.52■■■□□ 2.16
TMEM260-202ENST00000538838 PRDX5P30044 214 aa28.51■■■□□ 2.15
TMEM260-202ENST00000538838 EIF6P56537 245 aaKnown RBP28.51■■■□□ 2.15
TMEM260-202ENST00000538838 CIAPIN1Q6FI81 312 aa28.51■■■□□ 2.15
TMEM260-202ENST00000538838 KBTBD3Q8NAB2 608 aa28.51■■■□□ 2.15
TMEM260-202ENST00000538838 FSD1Q9BTV5 496 aa28.51■■■□□ 2.15
TMEM260-202ENST00000538838 ADAMTSL1Q8N6G6 1762 aa28.51■■■□□ 2.15
TMEM260-202ENST00000538838 ZGPATQ8N5A5 531 aaKnown RBP28.51■■■□□ 2.15
TMEM260-202ENST00000538838 IDH1O75874 414 aaKnown RBP28.5■■■□□ 2.15
TMEM260-202ENST00000538838 LRP2BPQ9P2M1 347 aa28.5■■■□□ 2.15
TMEM260-202ENST00000538838 VIL1P09327 827 aaKnown RBP28.49■■■□□ 2.15
TMEM260-202ENST00000538838 MYH2Q9UKX2 1941 aa28.48■■■□□ 2.15
TMEM260-202ENST00000538838 FKBP1AP62942 108 aaKnown RBP28.48■■■□□ 2.15
TMEM260-202ENST00000538838 RSBN1LQ6PCB5 846 aaPredicted RBP28.48■■■□□ 2.15
TMEM260-202ENST00000538838 ERICH6Q7L0X2 663 aa28.48■■■□□ 2.15
TMEM260-202ENST00000538838 LDHBP07195 334 aaKnown RBP28.47■■■□□ 2.15
TMEM260-202ENST00000538838 TNIP1Q15025 636 aa28.47■■■□□ 2.15
TMEM260-202ENST00000538838 RAI14Q9P0K7 980 aa28.47■■■□□ 2.15
TMEM260-202ENST00000538838 CHGBP05060 677 aa28.47■■■□□ 2.15
TMEM260-202ENST00000538838 ZBTB12Q9Y330 459 aaPredicted RBP28.47■■■□□ 2.15
TMEM260-202ENST00000538838 GJA3Q9Y6H8 435 aa28.47■■■□□ 2.15
TMEM260-202ENST00000538838 SPTY2D1Q68D10 685 aaPredicted RBP28.46■■■□□ 2.15
TMEM260-202ENST00000538838 F8W031 263 aaPredicted RBP28.45■■■□□ 2.14
TMEM260-202ENST00000538838 MAP3K12Q12852 859 aa28.45■■■□□ 2.14
TMEM260-202ENST00000538838 DZIP1Q86YF9 867 aaKnown RBP28.45■■■□□ 2.14
TMEM260-202ENST00000538838 MYO3BQ8WXR4 1341 aa28.45■■■□□ 2.14
TMEM260-202ENST00000538838 RFX7Q2KHR2 1363 aa28.45■■■□□ 2.14
TMEM260-202ENST00000538838 MECOMQ03112 1051 aa28.44■■■□□ 2.14
TMEM260-202ENST00000538838 SLFNL1Q499Z3 407 aa28.44■■■□□ 2.14
TMEM260-202ENST00000538838 KIAA0825Q8IV33 1275 aa28.44■■■□□ 2.14
TMEM260-202ENST00000538838 ZNF384Q8TF68 577 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms