RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CLUAP1	Q96AJ1	413 aa		15.31	■□□□□ 0.04
CLTCL1-205	ENST00000538828	MRI	Q9BWK5	157 aa		15.31	■□□□□ 0.04
CLTCL1-205	ENST00000538828	GGA3	Q9NZ52	723 aa		15.31	■□□□□ 0.04
CLTCL1-205	ENST00000538828	TRAF5	O00463	557 aa		15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	SRGAP3	O43295	1099 aa		15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	SLC5A1	P13866	664 aa		15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	ECE1	P42892	770 aa		15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	GYG1	P46976	350 aa		15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	FKBP1B	P68106	108 aa		15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	HDLBP	Q00341	1268 aa	Known RBP	15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	RBM26	Q5T8P6	1007 aa	Known RBP	15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	CERS5	Q8N5B7	392 aa		15.3	■□□□□ 0.04
CLTCL1-205	ENST00000538828	COL1A1	P02452	1464 aa	Predicted RBP	15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	SEMA3E	O15041	775 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	ZBTB7B	O15156	539 aa	Predicted RBP	15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	CELF2	O95319	508 aa	Known RBP	15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	SAPCD2	Q86UD0	394 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	USP48	Q86UV5	1035 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	KIAA0825	Q8IV33	1275 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	FBXW7	Q969H0	707 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	SERPINA10	Q9UK55	444 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	AKAP2	Q9Y2D5	859 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	ARAP2	Q8WZ64	1704 aa		15.29	■□□□□ 0.04
CLTCL1-205	ENST00000538828	POLA2	Q14181	598 aa		15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	MFSD14B	Q5SR56	506 aa		15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	ANGEL2	Q5VTE6	544 aa	Known RBP	15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	APOBEC3F	Q8IUX4	373 aa	Known RBP	15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	MXD3	Q9BW11	206 aa		15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	CHMP4B	Q9H444	224 aa	Known RBP	15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	ABT1	Q9ULW3	272 aa	Known RBP	15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	TNN	Q9UQP3	1299 aa		15.28	■□□□□ 0.04
CLTCL1-205	ENST00000538828	PCNT	O95613	3336 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	ECM29	Q5VYK3	1845 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	DLGAP5	Q15398	846 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	ATP2B3	Q16720	1220 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	NBPF9	Q3BBW0	867 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	WDR66	Q8TBY9	1149 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	SSH3	Q8TE77	659 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	GNL3L	Q9NVN8	582 aa	Known RBP	15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	MKRN1	Q9UHC7	482 aa	Known RBP	15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	RCAN3	Q9UKA8	241 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	PPP2R3B	Q9Y5P8	575 aa		15.27	■□□□□ 0.04
CLTCL1-205	ENST00000538828	MAST3	O60307	1309 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	PDS5A	Q29RF7	1337 aa	Known RBP	15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	MYO1B	O43795	1136 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	RLBP1	P12271	317 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	MAP2K2	P36507	400 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	VEGFB	P49765	207 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	BCAM	P50895	628 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	ATP8B2	P98198	1209 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	FMR1	Q06787	632 aa	Known RBP eCLIP	15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	C2orf69	Q8N8R5	385 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	SIL1	Q9H173	461 aa		15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	GBA2	Q9HCG7	927 aa	Predicted RBP	15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	PA2G4	Q9UQ80	394 aa	Known RBP	15.26	■□□□□ 0.03
CLTCL1-205	ENST00000538828	THSD7B	Q9C0I4	1608 aa		15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	WDR33	Q9C0J8	1336 aa	Known RBP	15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	SALL1	Q9NSC2	1324 aa		15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	SPDYE2B	A6NHP3	402 aa		15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	FRAT2	O75474	233 aa	Predicted RBP	15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	SPDYE6	P0CI01	402 aa		15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	ITPRIP	Q8IWB1	547 aa		15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	GPR108	Q9NPR9	543 aa		15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	NOP58	Q9Y2X3	529 aa	Known RBP	15.25	■□□□□ 0.03
CLTCL1-205	ENST00000538828	ASTN2	O75129	1339 aa	Predicted RBP	15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	PNMA6E	A0A0J9YXQ4	647 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	ADM5	C9JUS6	153 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	MAP2K1	Q02750	393 aa	Predicted RBP	15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	G3BP1	Q13283	466 aa	Known RBP eCLIP	15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	PDE3A	Q14432	1141 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	CFAP100	Q494V2	611 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	CDCA5	Q96FF9	252 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	CAPNS2	Q96L46	248 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	DENND2A	Q9ULE3	1009 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	DDX19B	Q9UMR2	479 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	TTF2	Q9UNY4	1162 aa	Known RBP	15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	PAPPA2	Q9BXP8	1791 aa		15.24	■□□□□ 0.03
CLTCL1-205	ENST00000538828	MYH13	Q9UKX3	1938 aa		15.23	■□□□□ 0.03
CLTCL1-205	ENST00000538828	UNCX	A6NJT0	531 aa		15.23	■□□□□ 0.03
CLTCL1-205	ENST00000538828	IGSF3	O75054	1194 aa		15.23	■□□□□ 0.03
CLTCL1-205	ENST00000538828	NF2	P35240	595 aa		15.23	■□□□□ 0.03
CLTCL1-205	ENST00000538828	TNFAIP1	Q13829	316 aa		15.23	■□□□□ 0.03
CLTCL1-205	ENST00000538828	MVP	Q14764	893 aa	Known RBP	15.23	■□□□□ 0.03
CLTCL1-205	ENST00000538828	CCDC102A	Q96A19	550 aa		15.23	■□□□□ 0.03
CLTCL1-205	ENST00000538828	HUNK	P57058	714 aa		15.22	■□□□□ 0.03
CLTCL1-205	ENST00000538828	HHIPL2	Q6UWX4	724 aa		15.22	■□□□□ 0.03
CLTCL1-205	ENST00000538828	ZGPAT	Q8N5A5	531 aa	Known RBP	15.22	■□□□□ 0.03
CLTCL1-205	ENST00000538828	WBP1L	Q9NX94	342 aa		15.22	■□□□□ 0.03
CLTCL1-205	ENST00000538828		A0A1B0GUL7	405 aa		15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	NOG	Q13253	232 aa		15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	SPDYE2	Q495Y8	402 aa		15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	FKBP1C	Q5VVH2	108 aa		15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	CCDC102B	Q68D86	513 aa		15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	REM2	Q8IYK8	340 aa	Predicted RBP	15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	PRMT6	Q96LA8	375 aa	Predicted RBP	15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	ZDHHC15	Q96MV8	337 aa		15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	ZNF408	Q9H9D4	720 aa		15.21	■□□□□ 0.03
CLTCL1-205	ENST00000538828	HSPA1A	P0DMV8	641 aa	Known RBP	15.2	■□□□□ 0.02
CLTCL1-205	ENST00000538828	HSPA1B	P0DMV9	641 aa	Known RBP	15.2	■□□□□ 0.02

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