RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 BCAS4Q8TDM0 211 aa14.21□□□□□ -0.13
USP3-203ENST00000538686 CCDC12Q8WUD4 166 aaPredicted RBP14.21□□□□□ -0.13
USP3-203ENST00000538686 PNKPQ96T60 521 aa14.21□□□□□ -0.13
USP3-203ENST00000538686 ZSWIM6Q9HCJ5 1215 aa14.21□□□□□ -0.13
USP3-203ENST00000538686 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.13
USP3-203ENST00000538686 STX10O60499 249 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 RPS6KA3P51812 740 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 FAM160A1Q05DH4 1040 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 DCTN1Q14203 1278 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 SLC5A9Q2M3M2 681 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 FILIP1LQ4L180 1135 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 TSPYL6Q8N831 410 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 KLHL23Q8NBE8 558 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 LSG1Q9H089 658 aaKnown RBP14.21□□□□□ -0.14
USP3-203ENST00000538686 SLC12A5Q9H2X9 1139 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 IRAK4Q9NWZ3 460 aa14.21□□□□□ -0.14
USP3-203ENST00000538686 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.14
USP3-203ENST00000538686 ADCY9O60503 1353 aa14.2□□□□□ -0.14
USP3-203ENST00000538686 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
USP3-203ENST00000538686 PLEKHD1A6NEE1 506 aa14.2□□□□□ -0.14
USP3-203ENST00000538686 AMPHP49418 695 aa14.2□□□□□ -0.14
USP3-203ENST00000538686 SNCBQ16143 134 aa14.2□□□□□ -0.14
USP3-203ENST00000538686 IGSF22Q8N9C0 903 aa14.2□□□□□ -0.14
USP3-203ENST00000538686 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
USP3-203ENST00000538686 STK31Q9BXU1 1019 aa14.2□□□□□ -0.14
USP3-203ENST00000538686 IKBKBO14920 756 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
USP3-203ENST00000538686 MTA1Q13330 715 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 SAAL1Q96ER3 474 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 RSRC1Q96IZ7 334 aaKnown RBP14.19□□□□□ -0.14
USP3-203ENST00000538686 CAPS2Q9BXY5 557 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 GGA2Q9UJY4 613 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 GOLGA6L7A0A1B0GV03 622 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 LRRIQ3A6PVS8 624 aaPredicted RBP14.19□□□□□ -0.14
USP3-203ENST00000538686 MYO1FO00160 1098 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 RASSF9O75901 435 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 SETSIPP0DME0 302 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 NFE2L2Q16236 605 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 ME3Q16798 604 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 WHAMMP3Q1A5X7 153 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 TLDC1Q6P9B6 456 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 KAT14Q9H8E8 782 aa14.19□□□□□ -0.14
USP3-203ENST00000538686 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 VSNL1P62760 191 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 FANCCQ00597 558 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 IFFO1Q0D2I5 559 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 FAM177A1Q8N128 213 aaPredicted RBP14.18□□□□□ -0.14
USP3-203ENST00000538686 DRAXINQ8NBI3 349 aaPredicted RBP14.18□□□□□ -0.14
USP3-203ENST00000538686 QRICH2Q9H0J4 1663 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 ANKRD26Q9UPS8 1709 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 CTAGE15A4D2H0 777 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 GOLGA6CA6NDK9 693 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 ZEB2O60315 1214 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 CAND2O75155 1236 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 GOLGA6DP0CG33 693 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 CTAGE8P0CG41 777 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 ST3GAL1Q11201 340 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 SLMAPQ14BN4 828 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 FAM173BQ6P4H8 233 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 CTAGE6Q86UF2 777 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 CTAGE4Q8IX94 777 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 ZNF513Q8N8E2 541 aaPredicted RBP14.18□□□□□ -0.14
USP3-203ENST00000538686 HOOK2Q96ED9 719 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 MBIPQ9NS73 344 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 GOLGA6AQ9NYA3 693 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 RPS6KL1Q9Y6S9 549 aa14.18□□□□□ -0.14
USP3-203ENST00000538686 PREX2Q70Z35 1606 aa14.17□□□□□ -0.14
USP3-203ENST00000538686 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
USP3-203ENST00000538686 PNPLA6Q8IY17 1366 aa14.17□□□□□ -0.14
USP3-203ENST00000538686 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
USP3-203ENST00000538686 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
USP3-203ENST00000538686 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
USP3-203ENST00000538686 NAA25Q14CX7 972 aa14.17□□□□□ -0.14
USP3-203ENST00000538686 CDCA2Q69YH5 1023 aaPredicted RBP14.17□□□□□ -0.14
USP3-203ENST00000538686 ACTR5Q9H9F9 607 aaPredicted RBP14.17□□□□□ -0.14
USP3-203ENST00000538686 RCOR1Q9UKL0 485 aa14.17□□□□□ -0.14
USP3-203ENST00000538686 HPCAL4Q9UM19 191 aa14.17□□□□□ -0.14
USP3-203ENST00000538686 GBP2P32456 591 aaPredicted RBP14.16□□□□□ -0.14
USP3-203ENST00000538686 ACTN3Q08043 901 aaPredicted RBP14.16□□□□□ -0.14
USP3-203ENST00000538686 RESTQ13127 1097 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 STIM1Q13586 685 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 ANKRD23Q86SG2 305 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 RPUSD2Q8IZ73 545 aaKnown RBP14.16□□□□□ -0.14
USP3-203ENST00000538686 RUFY2Q8WXA3 655 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 JAKMIP1Q96N16 626 aaKnown RBP14.16□□□□□ -0.14
USP3-203ENST00000538686 CRACR2AQ9BSW2 395 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 ALDH8A1Q9H2A2 487 aaPredicted RBP14.16□□□□□ -0.14
USP3-203ENST00000538686 SUGCTQ9HAC7 445 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 KIF5CO60282 957 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 PSMA5P28066 241 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 TMEM139Q8IV31 216 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 ENGASEQ8NFI3 743 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 MEIS3Q99687 375 aa14.16□□□□□ -0.14
USP3-203ENST00000538686 LARP6Q9BRS8 491 aaKnown RBP14.16□□□□□ -0.14
USP3-203ENST00000538686 SUDS3Q9H7L9 328 aaPredicted RBP14.16□□□□□ -0.14
USP3-203ENST00000538686 DDX20Q9UHI6 824 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms